Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0065110 | OGI:99060880 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg484:241291-244023 | ||||||||
| Gene Symbol | OsLRR | ||||||||||
| DNA seq | atggaggctgtaatccttgctgtctcaaagattggttcagttttagtggaggaagccaccaaagctgctatagccaagctatctgaaaaagttgcaaatctgaaggaactaccgacaaaggttgatgaaataaagaaggaactggagacaatgaacaatgttataaaaaagatgagtacaacacatcccaccgatgaggttgtcaagggttggattgtagaggtgcggggcctggcccaccatgttcaggatgtaatggacaaatattcataccatgctcttatgttggaagaagaaagttccatgaaaaaggtattcactaaaaagaaatatgtcacagttttcagtgaaattgcggaagagattatccagatagagaaaaagattgaaaatgctgggaagcggaaagaacggtggctgcagcagcctgaccttattcctaacccgcttacttatattgaaaggaaacagttccaagactgcctcctggcacaagattatctagtggggattgaaggcaacaggaagctgctgactgaatggttgtactccagtgagcaaggtaacacagtgataacggtatctggtatgggtggattgggcaaaaccgctctggtcaataatgtgtatgagcgggagaagaacaattttgatgctttttcttggattgtcgtgtcacagacatataatggggttgatctactgaggaaattacttaggaagattggtgttgtcgaaacgacgccaacaattgggtaccctgaacagacaaatttatcagatttggaccctcgtgacttgaaaaatataataaaggaaaggctaaaggatagaaaatttctggttgtattggatgatgtttggaaccgggaagcatacgctctgatagaggatgcgttcctaagctgccaaacaagtcgcataatcatcacaacaagacaggacgatgtggcaactcttgcatacccaacacaccgactcaaactcaaaccattggagcacaatgatgcatttgatctcttctgcaaaaagaccttctataacagcatgcacagcaagtgcccacaggatcttgagaagttggctcacaatatagtggacaggtgcgaaggcctgccacttgcaatcgtatctattggtggcttgttttcttcagtgaaactagagggttatatttggaatgaaacgtacaagcaacttggagacgagctagtgaacaatgatcatatacgagcaattctaaatctaagctaccgtgacttacctggacatcttagaaattgtttcttgtattgtagcctattccctgaagatcatctgttttcacgagataccctcatctggctgtgggttgcagaaggctttgcagtgcgaaaacaacatagcacaccagaggaggtggctgacagatatcttagggaactaatccaaaggaatatgctggatgttgtggaaaatgatgatctaggcagggctagtagctgtaagatgcatgatcttgtgcgcgacctggcactttctatagcaaaagaggagaaatttggcttttcaaatgattatggcacgatgatagaaatggaaagggatgttcgccgtctgtcatcttgtggatgggaaaacaatgatgtactaaaacttaaatttccacgtctgcgaaccctagtatcattgagagcaatgtcaccctccacttatatgctgtcctcaattttgtcagaatcaaactatcttacagttctcgagcttcaagactcagaaatcactgaagtgccagaatccatagggaatttgttcaacttacgttacatcggcttgcggagcaccaaggtcaagacactcccacaatcagttgaaaagctgtctaatctccacactttagacatcaagcaaaccaaaatagagaagctaccaaaaggaatcgctaaggtcaagaagctacggcacctgatagccgatagatatgctgatgaaacacagtcgaggttccagtatttcgtaggaatgcaagcacccaaaaatctgtccaatatggaggaactacaaactcttgagaccatgcaagccagcaaggacttggctgagcagctgagtaaattgttgaaattaagacgtgtatggattgacaacataagttatactgattgtgcaaagctttttgctaccctgtcaaacatgcagcttctttccagcttgcttatctctgcaaggaatgaaaatgaggcactttgctttgaggaactcaggccaaagtccaaagaactccacaagttaattatcagagggcaatgggccaagcagacactcgactacccaatatttcgttatcatggtacacaactcaattatctagcattaagttggtgctatcttggggaagatatgctagggatactctcttcacgcttggagaacctcacttgtctaagactgaacaatatacatggtacaaaaacattggttcttgatgcaaaggccttcccacgcctgaagatgcttgtgctgaagcacatgcctgatgtcaaccagatacaaattatgaatggtgcacttccagtcattgaaggtttgtatattgtgtctctatcaggggtggagagtgtccctcctggcattgaaacccttcggaccctgaaaaaactctggctgctcaatctgcacaagaacttcaaagctgactggattgagagagaaatgcaacagaaaatgcagcatgttccagagctactcatgtag
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| CDS seq | atggaggctgtaatccttgctgtctcaaagattggttcagttttagtggaggaagccaccaaagctgctatagccaagctatctgaaaaagttgcaaatctgaaggaactaccgacaaaggttgatgaaataaagaaggaactggagacaatgaacaatgttataaaaaagatgagtacaacacatcccaccgatgaggttgtcaagggttggattgtagaggtgcggggcctggcccaccatgttcaggatgtaatggacaaatattcataccatgctcttatgttggaagaagaaagttccatgaaaaaggtattcactaaaaagaaatatgtcacagttttcagtgaaattgcggaagagattatccagatagagaaaaagattgaaaatgctgggaagcggaaagaacggtggctgcagcagcctgaccttattcctaacccgcttacttatattgaaaggaaacagttccaagactgcctcctggcacaagattatctagtggggattgaaggcaacaggaagctgctgactgaatggttgtactccagtgagcaaggtaacacagtgataacggtatctggtatgggtggattgggcaaaaccgctctggtcaataatgtgtatgagcgggagaagaacaattttgatgctttttcttggattgtcgtgtcacagacatataatggggttgatctactgaggaaattacttaggaagattggtgttgtcgaaacgacgccaacaattgggtaccctgaacagacaaatttatcagatttggaccctcgtgacttgaaaaatataataaaggaaaggctaaaggatagaaaatttctggttgtattggatgatgtttggaaccgggaagcatacgctctgatagaggatgcgttcctaagctgccaaacaagtcgcataatcatcacaacaagacaggacgatgtggcaactcttgcatacccaacacaccgactcaaactcaaaccattggagcacaatgatgcatttgatctcttctgcaaaaagaccttctataacagcatgcacagcaagtgcccacaggatcttgagaagttggctcacaatatagtggacaggtgcgaaggcctgccacttgcaatcgtatctattggtggcttgttttcttcagtgaaactagagggttatatttggaatgaaacgtacaagcaacttggagacgagctagtgaacaatgatcatatacgagcaattctaaatctaagctaccgtgacttacctggacatcttagaaattgtttcttgtattgtagcctattccctgaagatcatctgttttcacgagataccctcatctggctgtgggttgcagaaggctttgcagtgcgaaaacaacatagcacaccagaggaggtggctgacagatatcttagggaactaatccaaaggaatatgctggatgttgtggaaaatgatgatctaggcagggctagtagctgtaagatgcatgatcttgtgcgcgacctggcactttctatagcaaaagaggagaaatttggcttttcaaatgattatggcacgatgatagaaatggaaagggatgttcgccgtctgtcatcttgtggatgggaaaacaatgatgtactaaaacttaaatttccacgtctgcgaaccctagtatcattgagagcaatgtcaccctccacttatatgctgtcctcaattttgtcagaatcaaactatcttacagttctcgagcttcaagactcagaaatcactgaagtgccagaatccatagggaatttgttcaacttacgttacatcggcttgcggagcaccaaggtcaagacactcccacaatcagttgaaaagctgtctaatctccacactttagacatcaagcaaaccaaaatagagaagctaccaaaaggaatcgctaaggtcaagaagctacggcacctgatagccgatagatatgctgatgaaacacagtcgaggttccagtatttcgtaggaatgcaagcacccaaaaatctgtccaatatggaggaactacaaactcttgagaccatgcaagccagcaaggacttggctgagcagctgagtaaattgttgaaattaagacgtgtatggattgacaacataagttatactgattgtgcaaagctttttgctaccctgtcaaacatgcagcttctttccagcttgcttatctctgcaaggaatgaaaatgaggcactttgctttgaggaactcaggccaaagtccaaagaactccacaagttaattatcagagggcaatgggccaagcagacactcgactacccaatatttcgttatcatggtacacaactcaattatctagcattaagttggtgctatcttggggaagatatgctagggatactctcttcacgcttggagaacctcacttgtctaagactgaacaatatacatggtacaaaaacattggttcttgatgcaaaggccttcccacgcctgaagatgcttgtgctgaagcacatgcctgatgtcaaccagatacaaattatgaatggtgcacttccagtcattgaaggtttgtatattgtgtctctatcaggggtggagagtgtccctcctggcattgaaacccttcggaccctgaaaaaactctggctgctcaatctgcacaagaacttcaaagctgactggattgagagagaaatgcaacagaaaatgcagcatgttccagagctactcatgtag
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| Protein seq | MEAVILAVSKIGSVLVEEATKAAIAKLSEKVANLKELPTKVDEIKKELETMNNVIKKMSTTHPTDEVVKGWIVEVRGLAHHVQDVMDKYSYHALMLEEESSMKKVFTKKKYVTVFSEIAEEIIQIEKKIENAGKRKERWLQQPDLIPNPLTYIERKQFQDCLLAQDYLVGIEGNRKLLTEWLYSSEQGNTVITVSGMGGLGKTALVNNVYEREKNNFDAFSWIVVSQTYNGVDLLRKLLRKIGVVETTPTIGYPEQTNLSDLDPRDLKNIIKERLKDRKFLVVLDDVWNREAYALIEDAFLSCQTSRIIITTRQDDVATLAYPTHRLKLKPLEHNDAFDLFCKKTFYNSMHSKCPQDLEKLAHNIVDRCEGLPLAIVSIGGLFSSVKLEGYIWNETYKQLGDELVNNDHIRAILNLSYRDLPGHLRNCFLYCSLFPEDHLFSRDTLIWLWVAEGFAVRKQHSTPEEVADRYLRELIQRNMLDVVENDDLGRASSCKMHDLVRDLALSIAKEEKFGFSNDYGTMIEMERDVRRLSSCGWENNDVLKLKFPRLRTLVSLRAMSPSTYMLSSILSESNYLTVLELQDSEITEVPESIGNLFNLRYIGLRSTKVKTLPQSVEKLSNLHTLDIKQTKIEKLPKGIAKVKKLRHLIADRYADETQSRFQYFVGMQAPKNLSNMEELQTLETMQASKDLAEQLSKLLKLRRVWIDNISYTDCAKLFATLSNMQLLSSLLISARNENEALCFEELRPKSKELHKLIIRGQWAKQTLDYPIFRYHGTQLNYLALSWCYLGEDMLGILSSRLENLTCLRLNNIHGTKTLVLDAKAFPRLKMLVLKHMPDVNQIQIMNGALPVIEGLYIVSLSGVESVPPGIETLRTLKKLWLLNLHKNFKADWIEREMQQKMQHVPELLM |
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| Function | Disease resistance protein RPM1 [UniProtKB/Swiss-Prot:Q39214] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0065110 | OsLiXu_Ung0065110.01 | ChrUN-Ctg484 | 241291 | 244023 | + | NAM | ||
| CDS seq | atggaggctgtaatccttgctgtctcaaagattggttcagttttagtggaggaagccaccaaagctgctatagccaagctatctgaaaaagttgcaaatctgaaggaactaccgacaaaggttgatgaaataaagaaggaactggagacaatgaacaatgttataaaaaagatgagtacaacacatcccaccgatgaggttgtcaagggttggattgtagaggtgcggggcctggcccaccatgttcaggatgtaatggacaaatattcataccatgctcttatgttggaagaagaaagttccatgaaaaaggtattcactaaaaagaaatatgtcacagttttcagtgaaattgcggaagagattatccagatagagaaaaagattgaaaatgctgggaagcggaaagaacggtggctgcagcagcctgaccttattcctaacccgcttacttatattgaaaggaaacagttccaagactgcctcctggcacaagattatctagtggggattgaaggcaacaggaagctgctgactgaatggttgtactccagtgagcaaggtaacacagtgataacggtatctggtatgggtggattgggcaaaaccgctctggtcaataatgtgtatgagcgggagaagaacaattttgatgctttttcttggattgtcgtgtcacagacatataatggggttgatctactgaggaaattacttaggaagattggtgttgtcgaaacgacgccaacaattgggtaccctgaacagacaaatttatcagatttggaccctcgtgacttgaaaaatataataaaggaaaggctaaaggatagaaaatttctggttgtattggatgatgtttggaaccgggaagcatacgctctgatagaggatgcgttcctaagctgccaaacaagtcgcataatcatcacaacaagacaggacgatgtggcaactcttgcatacccaacacaccgactcaaactcaaaccattggagcacaatgatgcatttgatctcttctgcaaaaagaccttctataacagcatgcacagcaagtgcccacaggatcttgagaagttggctcacaatatagtggacaggtgcgaaggcctgccacttgcaatcgtatctattggtggcttgttttcttcagtgaaactagagggttatatttggaatgaaacgtacaagcaacttggagacgagctagtgaacaatgatcatatacgagcaattctaaatctaagctaccgtgacttacctggacatcttagaaattgtttcttgtattgtagcctattccctgaagatcatctgttttcacgagataccctcatctggctgtgggttgcagaaggctttgcagtgcgaaaacaacatagcacaccagaggaggtggctgacagatatcttagggaactaatccaaaggaatatgctggatgttgtggaaaatgatgatctaggcagggctagtagctgtaagatgcatgatcttgtgcgcgacctggcactttctatagcaaaagaggagaaatttggcttttcaaatgattatggcacgatgatagaaatggaaagggatgttcgccgtctgtcatcttgtggatgggaaaacaatgatgtactaaaacttaaatttccacgtctgcgaaccctagtatcattgagagcaatgtcaccctccacttatatgctgtcctcaattttgtcagaatcaaactatcttacagttctcgagcttcaagactcagaaatcactgaagtgccagaatccatagggaatttgttcaacttacgttacatcggcttgcggagcaccaaggtcaagacactcccacaatcagttgaaaagctgtctaatctccacactttagacatcaagcaaaccaaaatagagaagctaccaaaaggaatcgctaaggtcaagaagctacggcacctgatagccgatagatatgctgatgaaacacagtcgaggttccagtatttcgtaggaatgcaagcacccaaaaatctgtccaatatggaggaactacaaactcttgagaccatgcaagccagcaaggacttggctgagcagctgagtaaattgttgaaattaagacgtgtatggattgacaacataagttatactgattgtgcaaagctttttgctaccctgtcaaacatgcagcttctttccagcttgcttatctctgcaaggaatgaaaatgaggcactttgctttgaggaactcaggccaaagtccaaagaactccacaagttaattatcagagggcaatgggccaagcagacactcgactacccaatatttcgttatcatggtacacaactcaattatctagcattaagttggtgctatcttggggaagatatgctagggatactctcttcacgcttggagaacctcacttgtctaagactgaacaatatacatggtacaaaaacattggttcttgatgcaaaggccttcccacgcctgaagatgcttgtgctgaagcacatgcctgatgtcaaccagatacaaattatgaatggtgcacttccagtcattgaaggtttgtatattgtgtctctatcaggggtggagagtgtccctcctggcattgaaacccttcggaccctgaaaaaactctggctgctcaatctgcacaagaacttcaaagctgactggattgagagagaaatgcaacagaaaatgcagcatgttccagagctactcatgtag
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| Protein seq | MEAVILAVSKIGSVLVEEATKAAIAKLSEKVANLKELPTKVDEIKKELETMNNVIKKMSTTHPTDEVVKGWIVEVRGLAHHVQDVMDKYSYHALMLEEESSMKKVFTKKKYVTVFSEIAEEIIQIEKKIENAGKRKERWLQQPDLIPNPLTYIERKQFQDCLLAQDYLVGIEGNRKLLTEWLYSSEQGNTVITVSGMGGLGKTALVNNVYEREKNNFDAFSWIVVSQTYNGVDLLRKLLRKIGVVETTPTIGYPEQTNLSDLDPRDLKNIIKERLKDRKFLVVLDDVWNREAYALIEDAFLSCQTSRIIITTRQDDVATLAYPTHRLKLKPLEHNDAFDLFCKKTFYNSMHSKCPQDLEKLAHNIVDRCEGLPLAIVSIGGLFSSVKLEGYIWNETYKQLGDELVNNDHIRAILNLSYRDLPGHLRNCFLYCSLFPEDHLFSRDTLIWLWVAEGFAVRKQHSTPEEVADRYLRELIQRNMLDVVENDDLGRASSCKMHDLVRDLALSIAKEEKFGFSNDYGTMIEMERDVRRLSSCGWENNDVLKLKFPRLRTLVSLRAMSPSTYMLSSILSESNYLTVLELQDSEITEVPESIGNLFNLRYIGLRSTKVKTLPQSVEKLSNLHTLDIKQTKIEKLPKGIAKVKKLRHLIADRYADETQSRFQYFVGMQAPKNLSNMEELQTLETMQASKDLAEQLSKLLKLRRVWIDNISYTDCAKLFATLSNMQLLSSLLISARNENEALCFEELRPKSKELHKLIIRGQWAKQTLDYPIFRYHGTQLNYLALSWCYLGEDMLGILSSRLENLTCLRLNNIHGTKTLVLDAKAFPRLKMLVLKHMPDVNQIQIMNGALPVIEGLYIVSLSGVESVPPGIETLRTLKKLWLLNLHKNFKADWIEREMQQKMQHVPELLM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0227200 | SBH | 0.992365 | 0.845109 | 1.595310 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g12000 | SBH | 0.930418 | 1.065886 | 0.475955 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0227200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0008110 | SBH | 0.321760 | 19.677416 | 1.190741 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0008040 | SBH | 0.198904 | 6.296239 | 0.434316 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0007950 | SBH | 0.062448 | 0.0 | 0.589054 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0007830 | SBH | 0.091967 | 0.138583 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0007920 | SBH | 2.486020 | 5.435768 | 3.408259 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0105900 | SBH | 0.109065 | 0.603869 | 0.012481 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0007960 | SBH | 0.426523 | 0.831860 | 0.573374 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0112200 | SBH | 15.4623085 | 6.930455 | 2.7797995 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_Ung0000540 | SBH | 0.252085 | 0.252808 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0008080 | SBH | 0.141007 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0007900 | SBH | 0.000000 | 10.080215 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0007950 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0008040 | SBH | 0.041712 | 4.415436 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G008050 | SBH | 0.057875 | 0.0 | 0.130986 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0007890 | SBH | 0.485273 | 3.405449 | 0.000000 |
