Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0059930 | OGI:99057030 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg448:498147-501627 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atggcctccaccacaacaaaatctccacatccttttttagttctctttgcccatcacatccatggcgatcacacgtttgctcctccagctgcttgctcttccctccactgtcatcttcctctttctcgccccggcttcccgctccatcgacgccggtgatgacctccacgctctcctatcattcagatcccacatagcaaaggatcattcgggtgcactgtcttcctggagtgttgtcagcaatggcacctctgatggcaccaatggcttctgctcatggagaggcgtgacgtgctccagtggtgcgcgccatcgtcgtgtcgtctctttgcgcgtgcagggtcttggcctcgttggcaccatctcacctcttcttggcaacctcaccggactccgaagctcgatctgtcagacaacaagcttgaaggtgagatccctcctagccttgcaagatgcttggcactgcagaggctcaacttgagtgtcaatttcttgtctggtgtgatccctccatccattggtcagctgtcaaagcttgaggttctcaatattcgccataacatatctcgggttatgtaccatctacatttgcaaatcttactgccctcaccatgttcagtattgctgataactatgttcatggacaaatcccatcatggctgggcaatttgaccgcgctagaaagttttaacattgcgggtaatatgatgggggcagtgttcctgaggctatatctcagcttacaaaccttgaagctttgactatatctggaaacggattagaaggtgagattcctgcatcattgtttaatttgtcctcccttaaggtgtttaatcttgggtcgaacaacatatcaggttctctgcctacagatattggccttacacttcccaatctaaggtattttattgccttctacaatagacttgaaagacaaattccagcctccttttcaaacatctctgtccttgaaaaattcatcctccacggaaatagattccgaggccgaattccaccaaatagtggcatcaatgccaattaacagtatttgaagtgggtaacaatgagcttcaagctacagagccgagggattgggaatttttaacatccttggctaactgcagcaatctaatctacatcaatcttcaactgaataacctgtcaggcattttgccaaatacaattgctaatctctcactagagctccagagcattagattgggaggaaatcaaatttctgggattttacctaaaggaatagggaggtatgccaaactcacaagccttgagtttgcagataaccttttcactggcactataccttcagatattggaaagctcactaatctccatgagttgcttctgttttcaaatggattccaggagagattccatcatccataggcaacatgacacaactaaatcagcttcttctgtctggtaactatcttgagggtagaattccagcaactattggcaacctaagcaagttaacttctatggacctttcaagtaatcttttgagtgggcaaatcccagaagagattatcagaatttcttccctgaccgaagcacttaatctctcgaacaatgcattaagtggccccatttctccgtatattgggaacttggtcaatgttggcataattgatctctcatcaaataaattgtctggtcagatcccaagcacccttggtaattgccttgcattgcaatttttatacttgcaagcaaatctcctccacggactaatcccaaaagagctcaataaacttaggggcttagaagtgttggatctctctaacaacaaattttcaggacccatccctgaattccttgagagcttccagcttctgaagaatctgaacctttcattcaataacctatctggtatggtgccagataaggggatattctctaatgcaagtgctgtatcacttgtaagtaatgatatgctatgtggaggccctatgttctttcatttcccgccatgcccatttcaatcttccgataagcctgcgcatcgttcggtggtgcatatcttgatctttctgattgtgggagcattcgtctttgttattgtttgcattgctacatgctactgcatcaagaggctaagggaaaagtcatccaaagttaatcaagatcaaggtagcaaatttatcgatgagatgtatcagaggatatcgtataatgagttaaatgtcgcaacgggttcattctctgcggaaaatttgatcggccgtggaagctttggtagtgtatatagaggaaacttaacttgtggttcaaatgtaatcactgtagcagtgaaggttcttgatctccatcagaccagagcagccaggagcttcatgtccgagtgcaatgccctaaaacggattcgacatcggaacctagtcaggattatcactgtttgtgatagcttggacaacaatggtgatgaatttaaggcacttgtattagagtttatctccaatggaaaccttgacacatggctacatccaagcacagaaaatacttcctacatacctgggaagctaagcttgatgcaaagattaaacattgctcttgatgttgcagaggcactggagtatcttcaccatcacattagtccttccattgctcactgcgatattaaaccaagtaatgttcttcttgataaggatatgactgcacatattggtgacttcagtttagcaagaaaatgagtgcagaagcagaaggccaatgcttggtgagagtagctcagttggaattaaaggcactattgggtacttagcaccaggtatgtaactacaggatgtaattcgaattctactgtcttaatttctgttcctgctccgttttgtttgcaccagttattttaggtatttttacctctacagttctgaactggtaaactcagttcatagatagttatctttcgttagtctgaaagtgcaccaataattgatttgtagcattcggtccattacaaaactgatttaatcctctccctttttttttttttggtctgaagaatatggcatggggacagaaatttctagagaaggtgacatatacagctacggtgttctactgctggaaatgcttactggtagaagaccaactgacacaatgtttcatgatgatatgagtcttccaaagtatgttgagatggcctatcctgataatttgttggaaattatggacaacgcaataccacaggacggaaattcccaagatattgtagattggtttattgctcctatttcaagaattggtttagcgtgttgtagggactctgcaagtcagagaatgagaatgaatgaggtagtgaaagaattgagtggcataaaggaggcatgcgaatctaaattcgaggaattttatctttgttcagtgtaagtggcggtaatacaagacttggtacgttatttgtataagtgaatggtagacgatatttatatcaatcgtatgaaatgtttgaacattaact
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| CDS seq | atggcgatcacacgtttgctcctccagctgcttgctcttccctccactgtcatcttcctctttctcgccccggcttcccgctccatcgacgccggtgatgacctccacgctctcctatcattcagatcccacatagcaaaggatcattcgggtgcactgtcttcctggagtgttgtcagcaatggcacctctgatggcaccaatggcttctgctcatggagaggcgtgacgtgctccagtggtgcgcgccatcgtcgtgtcgtctctttgcgcgtgcagggtcttggcctcgttggcaccatctcacctcttcttggcaacctcaccggactccgaagctcgatctgtcagacaacaagcttgaagaggctcaacttgagtgtcaatttcttgtctggtgtgatccctccatccattggtcagctgtcaaagcttgaggttctcaatattcgccataacatatctcgggttattgttcctgaggctatatctcagcttacaaaccttgaagctttgactatatctggaaacggattagaaggagagattccatcatccataggcaacatgacacaactaaatcagcttcttctgtctggtaactatcttgagggtagaattccagcaactattggcaacctaagcaagttaacttctatggacctttcaagtaatcttttgagtgggcaaatcccagaagagattatcagaatttcttccctgaccgaagcacttaatctctcgaacaatgcattaagtggccccatttctccgtatattgggaacttggtcaatgttggcataattgatctctcatcaaataaattgtctggtcagatcccaagcacccttggtaattgccttgcattgcaatttttatacttgcaagcaaatctcctccacggactaatcccaaaagagctcaataaacttaggggcttagaagtgttggatctctctaacaacaaattttcaggacccatccctgaattccttgagagcttccagcttctgaagaatctgaacctttcattcaataacctatctggtatggtgccagataaggggatattctctaatgcaagtgctgtatcacttgtaagtaatgatatgctatgtggaggccctatgttctttcatttcccgccatgcccatttcaatcttccgataagcctgcgcatcgttcggtggtgcatatcttgatctttctgattgtgggagcattcgtctttgttattgtttgcattgctacatgctactgcatcaagaggctaagggaaaagtcatccaaagttaatcaagatcaaggtagcaaatttatcgatgagatgtatcagaggatatcgtataatgagttaaatgtcgcaacgggttcattctctgcggaaaatttgatcggccgtggaagctttggtagtgtatatagaggaaacttaacttgtggttcaaatgtaatcactgtagcagtgaaggttcttgatctccatcagaccagagcagccaggagcttcatgtccgagtgcaatgccctaaaacggattcgacatcggaacctagtcaggattatcactgtttgtgatagcttggacaacaatggtgatgaatttaaggcacttgtattagagtttatctccaatggaaaccttgacacatggctacatccaagcacagaaaatacttcctacatacctgggaagctaagcttgatgcaaagattaaacattgctcttgatgttgcagaggcactggagtatcttcaccatcacattagtccttccattgctcactgcgatattaaaccaagtaatgttcttcttgataaggatatgactgcacatattggtgacttcagtttagcaagaaaatga
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| Protein seq | MAITRLLLQLLALPSTVIFLFLAPASRSIDAGDDLHALLSFRSHIAKDHSGALSSWSVVSNGTSDGTNGFCSWRGVTCSSGARHRRVVSLRVQGLGLVGTISPLLGNLTGLRSSICQTTSLKRLNLSVNFLSGVIPPSIGQLSKLEVLNIRHNISRVIVPEAISQLTNLEALTISGNGLEGEIPSSIGNMTQLNQLLLSGNYLEGRIPATIGNLSKLTSMDLSSNLLSGQIPEEIIRISSLTEALNLSNNALSGPISPYIGNLVNVGIIDLSSNKLSGQIPSTLGNCLALQFLYLQANLLHGLIPKELNKLRGLEVLDLSNNKFSGPIPEFLESFQLLKNLNLSFNNLSGMVPDKGIFSNASAVSLVSNDMLCGGPMFFHFPPCPFQSSDKPAHRSVVHILIFLIVGAFVFVIVCIATCYCIKRLREKSSKVNQDQGSKFIDEMYQRISYNELNVATGSFSAENLIGRGSFGSVYRGNLTCGSNVITVAVKVLDLHQTRAARSFMSECNALKRIRHRNLVRIITVCDSLDNNGDEFKALVLEFISNGNLDTWLHPSTENTSYIPGKLSLMQRLNIALDVAEALEYLHHHISPSIAHCDIKPSNVLLDKDMTAHIGDFSLARK |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0059930 | OsLiXu_Ung0059930.01 | ChrUN-Ctg448 | 498147 | 500857 | + | NAM | ||
| CDS seq | atggcgatcacacgtttgctcctccagctgcttgctcttccctccactgtcatcttcctctttctcgccccggcttcccgctccatcgacgccggtgatgacctccacgctctcctatcattcagatcccacatagcaaaggatcattcgggtgcactgtcttcctggagtgttgtcagcaatggcacctctgatggcaccaatggcttctgctcatggagaggcgtgacgtgctccagtggtgcgcgccatcgtcgtgtcgtctctttgcgcgtgcagggtcttggcctcgttggcaccatctcacctcttcttggcaacctcaccggactccgaagctcgatctgtcagacaacaagcttgaagaggctcaacttgagtgtcaatttcttgtctggtgtgatccctccatccattggtcagctgtcaaagcttgaggttctcaatattcgccataacatatctcgggttattgttcctgaggctatatctcagcttacaaaccttgaagctttgactatatctggaaacggattagaaggagagattccatcatccataggcaacatgacacaactaaatcagcttcttctgtctggtaactatcttgagggtagaattccagcaactattggcaacctaagcaagttaacttctatggacctttcaagtaatcttttgagtgggcaaatcccagaagagattatcagaatttcttccctgaccgaagcacttaatctctcgaacaatgcattaagtggccccatttctccgtatattgggaacttggtcaatgttggcataattgatctctcatcaaataaattgtctggtcagatcccaagcacccttggtaattgccttgcattgcaatttttatacttgcaagcaaatctcctccacggactaatcccaaaagagctcaataaacttaggggcttagaagtgttggatctctctaacaacaaattttcaggacccatccctgaattccttgagagcttccagcttctgaagaatctgaacctttcattcaataacctatctggtatggtgccagataaggggatattctctaatgcaagtgctgtatcacttgtaagtaatgatatgctatgtggaggccctatgttctttcatttcccgccatgcccatttcaatcttccgataagcctgcgcatcgttcggtggtgcatatcttgatctttctgattgtgggagcattcgtctttgttattgtttgcattgctacatgctactgcatcaagaggctaagggaaaagtcatccaaagttaatcaagatcaaggtagcaaatttatcgatgagatgtatcagaggatatcgtataatgagttaaatgtcgcaacgggttcattctctgcggaaaatttgatcggccgtggaagctttggtagtgtatatagaggaaacttaacttgtggttcaaatgtaatcactgtagcagtgaaggttcttgatctccatcagaccagagcagccaggagcttcatgtccgagtgcaatgccctaaaacggattcgacatcggaacctagtcaggattatcactgtttgtgatagcttggacaacaatggtgatgaatttaaggcacttgtattagagtttatctccaatggaaaccttgacacatggctacatccaagcacagaaaatacttcctacatacctgggaagctaagcttgatgcaaagattaaacattgctcttgatgttgcagaggcactggagtatcttcaccatcacattagtccttccattgctcactgcgatattaaaccaagtaatgttcttcttgataaggatatgactgcacatattggtgacttcagtttagcaagaaaatga
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| Protein seq | MAITRLLLQLLALPSTVIFLFLAPASRSIDAGDDLHALLSFRSHIAKDHSGALSSWSVVSNGTSDGTNGFCSWRGVTCSSGARHRRVVSLRVQGLGLVGTISPLLGNLTGLRSSICQTTSLKRLNLSVNFLSGVIPPSIGQLSKLEVLNIRHNISRVIVPEAISQLTNLEALTISGNGLEGEIPSSIGNMTQLNQLLLSGNYLEGRIPATIGNLSKLTSMDLSSNLLSGQIPEEIIRISSLTEALNLSNNALSGPISPYIGNLVNVGIIDLSSNKLSGQIPSTLGNCLALQFLYLQANLLHGLIPKELNKLRGLEVLDLSNNKFSGPIPEFLESFQLLKNLNLSFNNLSGMVPDKGIFSNASAVSLVSNDMLCGGPMFFHFPPCPFQSSDKPAHRSVVHILIFLIVGAFVFVIVCIATCYCIKRLREKSSKVNQDQGSKFIDEMYQRISYNELNVATGSFSAENLIGRGSFGSVYRGNLTCGSNVITVAVKVLDLHQTRAARSFMSECNALKRIRHRNLVRIITVCDSLDNNGDEFKALVLEFISNGNLDTWLHPSTENTSYIPGKLSLMQRLNIALDVAEALEYLHHHISPSIAHCDIKPSNVLLDKDMTAHIGDFSLARK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0059930 | OsLiXu_Ung0059930.02 | ChrUN-Ctg448 | 498195 | 501627 | + | NAM | ||
| CDS seq | atgcttggtgagagtagctcagttggaattaaaggcactattgggtacttagcaccagaatatggcatggggacagaaatttctagagaaggtgacatatacagctacggtgttctactgctggaaatgcttactggtagaagaccaactgacacaatgtttcatgatgatatgagtcttccaaagtatgttgagatggcctatcctgataatttgttggaaattatggacaacgcaataccacaggacggaaattcccaagatattgtagattggtttattgctcctatttcaagaattggtttagcgtgttgtagggactctgcaagtcagagaatgagaatgaatgaggtagtgaaagaattgagtggcataaaggaggcatgcgaatctaaattcgaggaattttatctttgttcagtgtaa
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| Protein seq | MLGESSSVGIKGTIGYLAPEYGMGTEISREGDIYSYGVLLLEMLTGRRPTDTMFHDDMSLPKYVEMAYPDNLLEIMDNAIPQDGNSQDIVDWFIAPISRIGLACCRDSASQRMRMNEVVKELSGIKEACESKFEEFYLCSV |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0337400 | SBH | 0.0 | 0.0 | 0.744268 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g19160 | SBH | 0.0 | 0.0 | 0.186246 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0337400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0007010 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0007040 | SBH | 0.0 | 0.0 | 0.386834 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0006760 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0007210 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0007080 | SBH | 0.0 | 0.0 | 0.341623 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0173500 | SBH | 0 | 0.0033855 | 0.199371 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0007090 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0184600 | SBH | 0.015664 | 0 | 0.02146 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0006810 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0006820 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0007310 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0006720 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0007380 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G007040 | SBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0007080 | SBH | 0.0 | 0.0 | 0.0 |
