Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0058540 | OGI:99056130 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg440:110475-112598 | ||||||||
| Gene Symbol | RLCK295, OsRLCK295 | ||||||||||
| DNA seq | tcatggggaaccaaagctcaaggggttgacactcagtatctccttcatgttggagtcaacctgtgagcagattaggattctggattttagtcgaaagcaggatagtaggagatatgtgtgcacatacaaaattactacaaagagtatagcatataacattaattacgaaacatttactaccaccatccacaatttgtggatgcaggtagtaaaacttagttattacaactagaaagaggaaattctgttgtacctacaaagcagtgctaatttgaggatttgattcaaaatttcatgtcatgcaagaaaatcgttaagaaaaagaattaatacaactattacttaggcttgcatggttgatcaaagaatcagcaaatgcaacctaacaaagaatctaaaaataaaagaagtgagtaccctgttgtttgcacaactgtacctggtgcgctggtaatcctatcacattgctttctttatcaaccactgaactggtaaagcgaccatttgaaacattcggaagaagcatggatgccattgcttcagccttcttacattcccatggaagcatattgacaatttttcttgcaggaggtcgtcttttaggatctatctccacacaattcagcccaattttaaaacatgaatgaacttgttggaggctatgtgtatccagcaacggataccttgatgttattttcgacatccttgaccatttgttacgtacctatatgtgatcacaattgttcacaattattatgtatcaaaataaccatacagcacataattgtctaagtctaaacaacctaaaactgtgtcaaaatcgttaaggaaaaaacacatacgctatgaataaaccgctgaccagaaagatcgacactgctttggtggtttttttctcctgtcacaatttctaggattagaatacccagactatatatgtctgacttagttgagatttctcctttatgacaatactctggtgccatataccctctgcatgacaataagaatagttcacttttaagcattccaagaaagagcaagttctacttaaattataaaaggatagaaaaagcaataagcatctaaacaccgaaaaggatattcaatagcttacattgatcctgtaaccattgtagtgcatgttcgtgtttgttcttcaccaaaaagccttgagagaccaaaatcagcaattttcggcagcaagttatcatccagtagtatattgcttggcttcagatccaaatgaatataggcttattttccaattcctcatgtaagtaacataaaccctggcatattccttttataattgcataacggtcatgccattcaagcacatgagattgatctgcagaggaaagggaagaagagtgaaagctccgatattttatgaacagagtgttaacagaaacaaaggtcaaacaatgtgacattagcaatacaagaaaagaaggggtgaatagagaaggtgtaccataaactaacttgtcaaggcttccatttgccatatactcgtagcagagcaacctttcttgcacttcagcacaaatatttttttttctggtactcatcatatatcactttctctgtctttcatcacagtagccaattaattgtactatgttctggtgcttaagtcccatgagatgatgaacctcattattaaattgtctgtcctgtattcctggcatgacctgaagcctcttgaccgctatgggtttcccatttgcaagaattccctgttaaacttcttttcttaatgtagatttggattttcaaatatccaaataagaaagatctgacattgacctttgacgtgtgccatcagttcatacagaatgtggtggtattcatatatagttttgcagtatatatttttaccataagttttgtagataaacaacagctatattccaattcgactacagcaacatatagattggagttcgacagtcgcaatggttatctgacacgaacgaaaataatcaaacagaattttagcgctttctttcatctaatagttaagtatggcttcaaatagttaggttactctctcaaatggaaaagtgctagaccataccttgtagaccactccaaacccacctttaccaagttcccgcc
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| CDS seq | atgccaggaatacaggacagacaatttaataatgaggttcatcatctcatgggacttaagcaccagaacataccaagcaatatactactggatgataacttgctgccgaaaattgctgattttggtctctcaaggctttttggtgaagaacaaacacgaacatgcactacaatggttacaggatcaatagggtatatggcaccagagtattgtcataaaggagaaatctcaactaagtcagacatatatagtctgggtattctaatcctagaaattgtgacaggagaaaaaaaccaccaaagcagtgtcgatctttctggtcagcggtttattcatagcgtacgtaacaaatggtcaaggatgtcgaaaataacatcaaggtatccgttgctggatacacatagcctccaacaagttcattcatgttttaaaattgggctgaattgtgtggagatagatcctaaaagacgacctcctgcaagaaaaattgtcaatatgcttccatgggaatgtaagaaggctgaagcaatggcatccatgcttcttccgaatgtttcaaatggtcgctttaccagttcagtggttgataaagaaagcaatgtgataggattaccagcgcaccaggttgactccaacatgaaggagatactgagtgtcaaccccttgagctttggttccccatga
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| Protein seq | MPGIQDRQFNNEVHHLMGLKHQNIPSNILLDDNLLPKIADFGLSRLFGEEQTRTCTTMVTGSIGYMAPEYCHKGEISTKSDIYSLGILILEIVTGEKNHQSSVDLSGQRFIHSVRNKWSRMSKITSRYPLLDTHSLQQVHSCFKIGLNCVEIDPKRRPPARKIVNMLPWECKKAEAMASMLLPNVSNGRFTSSVVDKESNVIGLPAHQVDSNMKEILSVNPLSFGSP |
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| Function | Cysteine-rich receptor-like protein kinase 8 [UniProtKB/Swiss-Prot:O65468] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0058540 | OsLiXu_Ung0058540.01 | ChrUN-Ctg440 | 110475 | 112598 | - | NAM | ||
| CDS seq | atgccaggaatacaggacagacaatttaataatgaggttcatcatctcatgggacttaagcaccagaacataccaagcaatatactactggatgataacttgctgccgaaaattgctgattttggtctctcaaggctttttggtgaagaacaaacacgaacatgcactacaatggttacaggatcaatagggtatatggcaccagagtattgtcataaaggagaaatctcaactaagtcagacatatatagtctgggtattctaatcctagaaattgtgacaggagaaaaaaaccaccaaagcagtgtcgatctttctggtcagcggtttattcatagcgtacgtaacaaatggtcaaggatgtcgaaaataacatcaaggtatccgttgctggatacacatagcctccaacaagttcattcatgttttaaaattgggctgaattgtgtggagatagatcctaaaagacgacctcctgcaagaaaaattgtcaatatgcttccatgggaatgtaagaaggctgaagcaatggcatccatgcttcttccgaatgtttcaaatggtcgctttaccagttcagtggttgataaagaaagcaatgtgataggattaccagcgcaccaggttgactccaacatgaaggagatactgagtgtcaaccccttgagctttggttccccatga
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| Protein seq | MPGIQDRQFNNEVHHLMGLKHQNIPSNILLDDNLLPKIADFGLSRLFGEEQTRTCTTMVTGSIGYMAPEYCHKGEISTKSDIYSLGILILEIVTGEKNHQSSVDLSGQRFIHSVRNKWSRMSKITSRYPLLDTHSLQQVHSCFKIGLNCVEIDPKRRPPARKIVNMLPWECKKAEAMASMLLPNVSNGRFTSSVVDKESNVIGLPAHQVDSNMKEILSVNPLSFGSP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0200000 | SBH | 0.405554 | 0.415906 | 1.544024 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g12620 | SBH | 0.000000 | 0.000000 | 0.314250 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0200000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0005530 | SBH | 0.000000 | 1.778537 | 2.559468 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0005380 | SBH | 0.0 | 0.000000 | 2.059144 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0005340 | SBH | 0.142481 | 1.651374 | 3.650414 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0005680 | SBH | 0.0 | 0.148520 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0005370 | SBH | 0.000000 | 7.079361 | 7.250955 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0122000 | SBH | 0.5639005 | 2.066949 | 1.519703 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0005560 | SBH | 0.028753 | 0.460054 | 0.375385 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0128400 | SBH | 0.9434425 | 2.214605 | 7.3696995 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0005440 | SBH | 0.000000 | 0.112127 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0005490 | SBH | 0.074769 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0005610 | SBH | 0.000000 | 2.143332 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0005350 | RBH | 0.053035 | 0.0 | 0.070039 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0005710 | SBH | 0.040077 | 2.175177 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G005550 | SBH | 0.0 | 2.049592 | 0.398645 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0005570 | SBH | 0.000000 | 0.000000 | 1.624113 |
