Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0050850 | OGI:99050720 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg389:73655-79370 | ||||||||
| Gene Symbol | RLCK266, OsRLCK266, OsSIRK1 | ||||||||||
| DNA seq | ctatctctggctcggcggcaaggggaggagaccgccggcggtggcaacaactactcctccacttccaaatctggtagcggcttctctgtgcatttgatttgaatttggggaacgcttgggagctagggttgctagatgtggattttttctctgtgcattatcttcccattctcttgtagattcttttgttgtagatgattcttgtattccgtaatagagatgatgcagatgctttgatttgtatgtcatgtttgatctgtggaaataaaaagcaaaggaaatgcttcgatttgtatgtcatgtttgaatgtttgatatgtggaaataagcaggaaaggaaatatgcatgtcggttttgttacattttatttttgccaaaatccatcatcactggcagtcgtcttaaccgccactagtgaaaatcttcttttcgctgatggctgccttaacctaaccgccagccaaaagcattttcactggcggctgcattatgtcgtccgccagtgaatcaatatacgctggcggctggtggccacttgtaaaaatggagcatttcacaggcctttgctttgtggcggctccaatttccgtcagcaaaaacctaaaatggccaccacgaaaaatagtttccgtagtagtgtatttggagagggttgagcacaaaagtgttgcttacgtagcatgccacgttagcggtcaaatgtagtcaagggacgattggaccggggatggcacattcaagttcacggacctaagtgacaccaccccataagtttaaggaccggtcatgtatttcactcttttatttatgttcggatctgtatattaatttatcgttttgtataccacggcttgattcatggaaagagattaaattgataaatagtctgaaaattggctaaatttctggatgtcacagtgtgctaggtcgtgctctcgtgcgcgtgtgtgttgtggccttgtgggtatatatgtacatgtgcatcttatgttatgtgtaataaaaaaatatatacttttagagtagtatatatagggatactaaattgttaatgaagataactccatgttgaaaaacatgatcttttaatgaaagggcatgtagcctagtggttgcattgacctgagtagcaccccacctgagttcaaatctgcataggagcgaatttcagatggcaaaatttgtcacaagacacacaaaaaatgtgtaattggctaggagacaccgcgaaaacatgacacggctgatggacactacaaaagttacgtaattagccataggacattagtctcattattttattatctccgtgtcaaaagatgtgagaaaattttcaaatggcgagattgccccagtcgctatcttccctcacccgaaatcacaaaaattttgtagctgctggcaaggttgtcgacggcgaggtagctggtgtggaggcggcagacagcgctggaggcggacgtggtcggcgagggacgggaggtggaggcgcacgagccctagcaggtggaggagcacgagatcctaccacggtgacgaaggatgctgcgccgccaccatcgtcctcctcgtcgtcgctgccggtggcggcggcgcggatgcggatgtggtcgcctggtcagggagggacgggaggtggaggagcgagccctcgcggatccgccgagagatcctgccatggcggcgaaggttgctgcaccgccgccatcctcgtcatcatcgtcggtgccggcggcagtagcatggagtgcgaggaggaggtggccgccagtgtcgcccgccccaccgcgcctccgaggccgccgtgctgttcccggcgaagtcaacgggaaggggaaaagaaggaaagtgaaggagaaaaggaaggaaagagaaggggcaatccgggcatttagaaaaatatctcacctctttttacccggaaataataaaataatacgaccggtgtcctacggccaattatacgttttgtgtagtgtccatcagctgtgtcacgtttttgcggtgtctcccatccaattatatgttttttgcgtgtcctgtggcaaattttgccatttcagattgggttatttgaggactaagttatctgcttgataggctaagtttctaatttaaaaagaatgtagagaccggataaaaaatacccatatttaaaaaaaatccaaagtagaggccggaaaaaaaatacctatatctaaaaaatatccaaacaaacacgaatagaacgtccccgcaaaaaaaaaaaaaaacacgaatagaacgaacagatgacatacctgaggtatttgcttgagcccatgttgcagcgtgtgtaaagcccaagcgatttgttggccacggcgtccgggtacatgtcggcgctcagtggcctcagctccagagccgagatgaacggagttccatggcctgtgtccagcaggcacaccgacagcgagctggccacggcgacggcgatcgcctcgaacgcgtacgtcgtcgcggcgtcggagacggtcacctcgtaccagaagtcgaggccgatgttcaggttgaacctcaccggcgtgctcgcgaggctcctctcgccgccgtcgtagtcgccgtgcatgaaccacgccctgacgaggtacttgaggcctctcgcggcggcggcgacggcgtagcagttgcggccgccggaagggaagctcctcaggctaaggcctgacgtgtatagcgctcggcttttgtattccgatgaaatctcgtgcttctctccggttgctatgtacgcgtcgtcggagacgtaggaaatgttcgtgcgatcgtccacgtaggaaggcccacttagcccgcagtcgatgctcacgaaccctgcagatagattcagagttaaaccacgtacgtacgtgaatatatagtgagattattatatatactggtttaactctgtatcataagatatatagatatatctctatatatgcacgtacgtacctagattatcaggctctgcatgtacgtacacatgcagcagtagaaaaggatgaacaagcagcaagaacttcagtactaagaacctcattaattctactcgatcgagatatatttcttcgtctttccttgttctgatcgggaaatatatagccgggctcgacaacaaccaaccgatcttattctatacgtagtacttatggatatgttatttgtgtttgtcgtcatgtctatggttgtcaacttaggataattaatactatataccaccctagctacttgatttcgactcaattgacaatagatttaccccttgatgctacgtacgttcaaaatggttaggtcctggttacgagaggctcagtagcaccttacgtcctaggtttgactcttcatggaaacgaattttccaggatataacggtgttgtgctttcagtggtagacgacgtaaccgtcgacagcgaggcgtctgtgatgactttgtgaatctcaaggatttgctggcccagtattcgaagatgctcatgatgcgtctgtgatgacttcgttaatctcaaggatttgtcggcccagtcttcgaagatgctcataggggtagggtttgcgtgtgttcataggagtgagtgcgcgtgcgttgtgagtgtctgcgttgtactgtgtattctaaaaaaaaaaaagttaggccagggagatcacgacacatcaattttttttttaatttggtatcacgaaaattgaaacattgggcgctgttcgatcacacattcttcgtcactctacgtaagtgcacatcatcgatgtacctgtcaaaggtatggctagcttgtgctgggtatatacagcatgaaaaagacgtgattccgtcagttcttacaattatatctccctggcctggtttcaaccatatttatctactagagactagggcgcgccaatggcgtgccgcctataggcaatgatgacgaaaatgtagttgacaatcaggataggttagtagattgtgaaacaaaggagatacttgtctcaatggtaggtattgttatctcaagttggctgaggacgaatacaataatggttcgattacacattatactcacataaactgcctagtgattatacaccacgaggcaaaattagcaaaagtaacaatcaatttatgagccgtctatcccttgtaaaagaaaaaaaaaactcttttaatgtcaaaacatttagcgactcgctatctactggatcatctgtagagcaaaacaaaagcaatcgttaatttaagggaaaacacatgaacactataaatgtaacccaacaaaaaatatatcgttcgatagcatcttgagacacgacaagaattgaaacaaagcaaagaggaagttctctgtccataatagcacgccaacagaaatgaattggcaacatctggacaaaacgatttaccagcaccataatactaacgcaaaattttattcggtaaaaagtcttgcgattaatcaaaggaatttttaaaacaagtctctagagatataaaatgcgtaaaaacaccgataactatactcatatgggtccgtacaataaatcgcagtgattatcacagtgatcagtaaaagaagaacacaaagtcgctatcatgcactaaacaagtcgtcttatcgaagaataaaacaccaacctagcatcttgagttgattagccgatctatgccaggctcgcattgccagtttgccagtagtttgccagtgccttgagtggtaatagagaccagtccatataatgagaaatggccaccatacccctataatttttgttgtattttaatattagcagggttctttcaaaattgagttaattgcaatggtgatgcaagccactggacaatctccttcatgtactttcctttctagctagttaggttaactttgaaatgtttctccaattttcacaaatagcagccacacatgagtccattctcaagaaatacaacaacctgacaattcagtattatgccatggcaactctgtaagagcataatcttttcatgttaaaacacgttctagatcctgagatgtaaatgtcatgataattcagtatggtcaaaattaatggcaagcatgctatgcgtatagatcgaaggctcatgtaccagatgctaacatcccataggagtatatagataactattatttagcccaaactgaatataaggataaattgcactgcaaggaaatactaccaatataggcatggaaaggaactgaagttgagactaatagaataaacccaccatttgtgggaaaaaacaataaatatatgctatggtacaactgattgtaaatacaaaaggtttgttaagatcaaacttttcatagttgtggtaaattgattatatttacaaacttttcataggaggtgccgacctcctctacgtcctcagcctcctccgcaacttccgcggaggcctcgacggcttcctcctcatcatcatcatccgctgcctcctcctcagcctccggcgcgtacccctcctcctggtaagactcctccggcacgtcggactcctcggcggcgctgggctcagcgaagtctagcgcggcggcagaggatgaagaggattcgaaggagtcggatgcggcgagcggcgcgagtgggaggcggcgggtggagcggatgtggaggcgcggggtggacggggagaggaggaggaggaatggggcggaggaggagggggagggcttggggaggaaggagtagccgaggagggcgag
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| CDS seq | atggtggggttcgtgagcatcgactgcgggctaagtgggccttcctacgtggacgatcgcacgaacatttcctacgtctccgacgacgcgtacatagcaaccggagagaagcacgagatttcatcggaatacaaaagccgagcgctatacacgtcaggccttagcctgaggagcttcccttccggcggccgcaactgctacgccgtcgccgccgccgcgagaggcctcaagtacctcgtcagggcgtggttcatgcacggcgactacgacggcggcgagaggagcctcgcgagcacgccggtgaggttcaacctgaacatcggcctcgacttctggtacgaggtgaccgtctccgacgccgcgacgacgtacgcgttcgaggcgatcgccgtcgccgtggccagctcgctgtcggtgtgcctgctggacacaggccatggaactccgttcatctcggctctggagctgaggccactgagcgccgacatgtacccggacgccgtggccaacaaatcgcttgggctttacacacgctgcaacatgggctcaagcaaatacctcagatttggaagtggaggagtagttgttgccaccgccggcggtctcctccccttgccgccgagccagagatag
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| Protein seq | MVGFVSIDCGLSGPSYVDDRTNISYVSDDAYIATGEKHEISSEYKSRALYTSGLSLRSFPSGGRNCYAVAAAARGLKYLVRAWFMHGDYDGGERSLASTPVRFNLNIGLDFWYEVTVSDAATTYAFEAIAVAVASSLSVCLLDTGHGTPFISALELRPLSADMYPDAVANKSLGLYTRCNMGSSKYLRFGSGGVVVATAGGLLPLPPSQR |
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| Function | Putative leucine-rich repeat receptor-like protein kinase At2g19210 [UniProtKB/Swiss-Prot:O65924] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0050850 | OsLiXu_Ung0050850.01 | ChrUN-Ctg389 | 73655 | 79370 | - | NAM | ||
| CDS seq | atggtggggttcgtgagcatcgactgcgggctaagtgggccttcctacgtggacgatcgcacgaacatttcctacgtctccgacgacgcgtacatagcaaccggagagaagcacgagatttcatcggaatacaaaagccgagcgctatacacgtcaggccttagcctgaggagcttcccttccggcggccgcaactgctacgccgtcgccgccgccgcgagaggcctcaagtacctcgtcagggcgtggttcatgcacggcgactacgacggcggcgagaggagcctcgcgagcacgccggtgaggttcaacctgaacatcggcctcgacttctggtacgaggtgaccgtctccgacgccgcgacgacgtacgcgttcgaggcgatcgccgtcgccgtggccagctcgctgtcggtgtgcctgctggacacaggccatggaactccgttcatctcggctctggagctgaggccactgagcgccgacatgtacccggacgccgtggccaacaaatcgcttgggctttacacacgctgcaacatgggctcaagcaaatacctcagatttggaagtggaggagtagttgttgccaccgccggcggtctcctccccttgccgccgagccagagatag
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| Protein seq | MVGFVSIDCGLSGPSYVDDRTNISYVSDDAYIATGEKHEISSEYKSRALYTSGLSLRSFPSGGRNCYAVAAAARGLKYLVRAWFMHGDYDGGERSLASTPVRFNLNIGLDFWYEVTVSDAATTYAFEAIAVAVASSLSVCLLDTGHGTPFISALELRPLSADMYPDAVANKSLGLYTRCNMGSSKYLRFGSGGVVVATAGGLLPLPPSQR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0356000 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g18620 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0356000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0007040 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0007040 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0007230 | SBH | 0.000000 | 0.0 | 0.582392 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0007100 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0007210 | SBH | 0.612551 | 3.465068 | 8.907764 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0198300 | SBH | 0.8216335 | 3.8622105 | 2.9796045 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0007250 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0176200 | SBH | 0.623677 | 1.0631815 | 2.3892725 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0007120 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0007110 | SBH | 0.142830 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0006940 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0006910 | RBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0006960 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G007490 | SBH | 0.0 | 0.0 | 0.373650 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0007290 | SBH | 0.0 | 0.0 | 0.0 |
