Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsLiXu_Ung0049510 | OGI:99049780 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg378:216652-221081 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | ctagttctattattcgacgcactagggagttttatatccttgaattggagcctatagcttcgtcgaatgcagaagacgcgcatgcatgcacgcacgcatcgacgcatggtgcgtcatgcatcatggctcggcatagagatggtccggcagcctgggcttgacaacggcgaggagagggatcttccgcggcatggtgagcccgaagacactactacagatccgggcttcagtgacgggtcatctgtaacgggccaacgcaactcatcaaagatgagtcatctttgacgggccgaaaaaatatcctcttcaatatatggctaccagagaggacccgtcacagatgtgaagtcatctgtgacggcttgcacttgtaacgggtcacaaccatggctcgtcacaaatgacatgtcatctgtgaggggtgtagtattatgaaccatcacaaaagagaccactcatctctgacgggtcTttaactaacacacgtcacagataacgttatctctgacgggtggtagttatgacccgtcagtgatgagtgaaaattcaaatttttaaattttgtaaaaaacctcggattgaaacatgtcctatataaaagttgtagctctcaatgatatccacaactttataactaacaacatttctattagagatcgtttacatccccgaagatgcattacaagtgatcagatctacttttaaaaacaaaattttgagttttttttcaaatgacatggatggatacatgccccgtatcaaagtcatagaactcaatcagatctacaacattataattgaaaatattttcatttcacaaaatttacatgttataaagtgagatatattttgaaaaatgaaattttgaattcttcaaacaacatcggatgaagatattttctatgtaaaagttataaaacacgatgagatctataactatttagttgataatattttcatttgaagtcatttagggtgttaaatatatgttaaatgattcagacaagcatagacaaaataataacattgggttcgtagtcaatatgtgttgagtaggtgagttggtaagggagctctatatggaggttgaggtcttgagttcgaatctcacttgtagcatacaagttatattgcgttaaaaattgtgaatttgtaggtagtgatgtgtaaccatgtataggatggctagtaaaattcaaaatatttttttgaggttttttgttgcgtttaaaattcaaaaaattgtgaatttgtaggtagtgatgtgtaaccatgtataggatggctagtaaaattcAaaatatttttttgaggttttttgttgcgtttaaaattcaaaaattgtattttttgctttgtcatcagtgacgggtcgtaagttacaacccgtcagagatgagtcatcagtgacggtcaggtagttacgacacgtcactgatgactcatctgtgacgggtgacaagttttaacccgttagagatgacttatataccggtcagagatggattatctgtgacgggtgtttcatccgtcacaggtgaTtttgtcatcagtgaccactaatcactgaccaagaccaaacccgtcaaaggtgaGggtttgggcccgtcagagatgacctggtccggcgtagtgagatctcttccatgctcagctcgCcggcggcgatgccgtcggggaggttccaggagaaggcgtgcagcaggttggcgagggcgagctggatgaccttgagaccgaggctgtaccccgggcacatccgccggcccgtgccgaacggtagaagctcgaagtctcgCcccttgacgtcgatcccgcttcccacgaaccgctccggccggaactcctccggcgagtcccacaacgacgggtcgcggttgatggtccacgtgttgacgagcacgcgcgtgccggcggggacgtcgtagccggcgacggtggcgtcctcgcgagacatccGgggtatcagcagcggcgccaccgggtgcatccgcatcgtctccttcatgatggcgtcgacgtaggggaggtgcgggatgtcgctctctgtcaccaagcggccactgccaacgacgttgtctagctccttggtggccttggcgaggatcgccggattcttcaggacctctgacatggcccattccacggtcactgcactggtgtccgcgccaccggtgacaaggttctgcacaaggcatatatgccaaacggtgcactgtatcaaaatgtcgtcctaatagttatatcaaaaaataggataaaaattagacaatacaaaattactatatttattagaaagaaaagttaaattcgacttgcacggagggaaaatttcaagctgtgaacacgattatatattttttttgacgtgactacgacctcaagctggattatcgtaaccagcaacctcaatctcatgtcccattgctactagtagtctagtacatccaaaagtgcatgcaTtttttttgttcttatagaattttcttttaaattactcatccgatttatgatccgatttcatgattatattttttatgaaaaaatacaaattactattataatttatctaattaaattacttttagattttattaaaTtgcttcttagtcataaaagtaaattcaataaagcctgaaagtaatttacatataacttaaaagaaaaggaaagtaacttgttatcgcattaaaagtaaatatgttgtggggtaaaaacataagtctatctagaaattagatttaattgatgtgttatCccataacagatttacttctaatgccgtgacaagttattttcttttttttaagttactgctataatatatatataaattgcttttaggccttattaaatttacttttatatatctaagatgtagtttagtaaaatctaaaattaatttgtattttttcactaaaatataatcatgtaagatcttgttgtaaagatttaattgttacggacacaacagtgtatttggatagtgtattcggatcgtagttcggatgagtaaattaagagaaaaaattatttgaagcaaaggtagtaggaacatattttatacttacttgatagacaagtactatatttagacaacatctgatgacgtcacttgttagcactaaaacgagatgtctcttgatttagattttgcgggttttttttcacatgttagttcaatttagaaaatccctatccagattagtattgataggtatattgtattccgtactaaattatggaataggagtgaacaaatttcaattgccaagacAtaaaatagggaaagaaaacctcgataatatatgaatatggttgatgtattacttttttttttgcagagaaggataTttttttacccggtttctatatccaaccgaacatatctagacatatacagccttaaacaacccaatataaaattcgctcttactgagatttcaaaccttgtgttgttattgaggtctcacggcatgatgaactacctgggtaatacccttgacaccattctgggtaagctggacgtcgagattagggtcatcggcgagctgcaggagaacgtccaccatgtccctggccacaaagccatccccctgtaaccgccgccgctcgtcgtgctcgtcgaggacacggtccaggaaccggtgcattaacctgttcaccttcttcatcctcctgacgtacccctgcaggtccagccaatccagccatgggatgaagtcaccgatgttgagcacgccgctcatcaggaacagctcatccatcatccacttgaactcctctggagtcgtcggcggcgacgaagccgtttcggctccggccggctgcttctcgacgtacttctttccgagcaccatgcgcgagatcacgccgagcgtcaccatggacaggtggtccccgagctgcacggcgttccccgccacgccggcgctgtgcaggtcacgcagcagcgcgcgcacctcctcgtggcggatgtgctcgagcgactcgagccgcctggcgctgaagagctcggcgacgcacatcttgcgcgcctggcgccagtaggcgccatagggcgaccagacgatgtcggcgcagtcgtaggcggtgtacttgccggcggcggtcctgggtcggtcggcgaacaccgcgtcgttagtcttgaggaagagcttggccatctcgacggaggagccgacgacgacggggcaggagccgaaccagagctgcacgatggggccatggcgcttggatatctcgtggatggagcggtgcggcagcgcgccgatgaggttgaggttgccgatgatcggccatggctttggtccgggtgggagcttgtaagctccgcggcggcggagcagaacggcctggaggaggaagacgaagacaacggtggcgagcatgacggcaaagaaagttgcccatgatggtagtagctccat
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CDS seq | atggagctactaccatcatgggcaactttctttgccgtcatgctcgccaccgttgtcttcgtcttcctcctccaggccgttctgctccgccgccgcggagcttacaagctcccacccggaccaaagccatggccgatcatcggcaacctcaacctcatcggcgcgctgccgcaccgctccatccacgagatatccaagcgccatggccccatcgtgcagctctggttcggctcctgccccgtcgtcgtcggctcctccgtcgagatggccaagctcttcctcaagactaacgacgcggtgttcgccgaccgacccaggaccgccgccggcaagtacaccgcctacgactgcgccgacatcgtctggtcgccctatggcgcctactggcgccaggcgcgcaagatgtgcgtcgccgagctcttcagcgccaggcggctcgagtcgctcgagcacatccgccacgaggaggtgcgcgcgctgctgcgtgacctgcacagcgccggcgtggcggggaacgccgtgcagctcggggaccacctgtccatggtgacgctcggcgtgatctcgcgcatggtgctcggaaagaagtacgtcgagaagcagccggccggagccgaaacggcttcgtcgccgccgacgactccagaggagttcaagtggatgatggatgagctgttcctgatgagcggcgtgctcaacatcggtgacttcatcccatggctggattggctggacctgcaggggtacgtcaggaggatgaagaaggtgaacaggttaatgcaccggttcctggaccgtgtcctcgacgagcacgacgagcggcggcggttacagggggatggctttgtggccagggacatggtggacgttctcctgcagctcgccgatgaccctaatctcgacgtccagcttacccagaatggtgtcaagggtattacccagaaccttgtcaccggtggcgcggacaccagtgcagtgaccgtggaatgggccatgtcagaggtcctgaagaatccggcgatcctcgccaaggccaccaaggagctagacaacgtcgttggcagtggccgcttggtgacagagagcgacatcccgcacctcccctacgtcgacgccatcatgaaggagacgatgcggatgcacccggtggcgccgctgctgatacccCggatgtctcgcgaggacgccaccgtcgccggctacgacgtccccgccggcacgcgcgtgctcgtcaacacgtggaccatcaaccgcgacccgtcgttgtgggactcgccggaggagttccggccggagcggttcgtgggaagcgggatcgacgtcaagggGcgagacttcgagcttctaccgttcggcacgggccggcggatgtgcccggggtacagcctcggtctcaagaactag
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Protein seq | MELLPSWATFFAVMLATVVFVFLLQAVLLRRRGAYKLPPGPKPWPIIGNLNLIGALPHRSIHEISKRHGPIVQLWFGSCPVVVGSSVEMAKLFLKTNDAVFADRPRTAAGKYTAYDCADIVWSPYGAYWRQARKMCVAELFSARRLESLEHIRHEEVRALLRDLHSAGVAGNAVQLGDHLSMVTLGVISRMVLGKKYVEKQPAGAETASSPPTTPEEFKWMMDELFLMSGVLNIGDFIPWLDWLDLQGYVRRMKKVNRLMHRFLDRVLDEHDERRRLQGDGFVARDMVDVLLQLADDPNLDVQLTQNGVKGITQNLVTGGADTSAVTVEWAMSEVLKNPAILAKATKELDNVVGSGRLVTESDIPHLPYVDAIMKETMRMHPVAPLLIPRMSREDATVAGYDVPAGTRVLVNTWTINRDPSLWDSPEEFRPERFVGSGIDVKGRDFELLPFGTGRRMCPGYSLGLKN |
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Function | Dimethylnonatriene synthase [UniProtKB/Swiss-Prot:A0A1D6HSP4] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLiXu_Ung0049510 | OsLiXu_Ung0049510.01 | ChrUN-Ctg378 | 216652 | 221081 | - | NAM | ||
CDS seq | atggagctactaccatcatgggcaactttctttgccgtcatgctcgccaccgttgtcttcgtcttcctcctccaggccgttctgctccgccgccgcggagcttacaagctcccacccggaccaaagccatggccgatcatcggcaacctcaacctcatcggcgcgctgccgcaccgctccatccacgagatatccaagcgccatggccccatcgtgcagctctggttcggctcctgccccgtcgtcgtcggctcctccgtcgagatggccaagctcttcctcaagactaacgacgcggtgttcgccgaccgacccaggaccgccgccggcaagtacaccgcctacgactgcgccgacatcgtctggtcgccctatggcgcctactggcgccaggcgcgcaagatgtgcgtcgccgagctcttcagcgccaggcggctcgagtcgctcgagcacatccgccacgaggaggtgcgcgcgctgctgcgtgacctgcacagcgccggcgtggcggggaacgccgtgcagctcggggaccacctgtccatggtgacgctcggcgtgatctcgcgcatggtgctcggaaagaagtacgtcgagaagcagccggccggagccgaaacggcttcgtcgccgccgacgactccagaggagttcaagtggatgatggatgagctgttcctgatgagcggcgtgctcaacatcggtgacttcatcccatggctggattggctggacctgcaggggtacgtcaggaggatgaagaaggtgaacaggttaatgcaccggttcctggaccgtgtcctcgacgagcacgacgagcggcggcggttacagggggatggctttgtggccagggacatggtggacgttctcctgcagctcgccgatgaccctaatctcgacgtccagcttacccagaatggtgtcaagggtattacccagaaccttgtcaccggtggcgcggacaccagtgcagtgaccgtggaatgggccatgtcagaggtcctgaagaatccggcgatcctcgccaaggccaccaaggagctagacaacgtcgttggcagtggccgcttggtgacagagagcgacatcccgcacctcccctacgtcgacgccatcatgaaggagacgatgcggatgcacccggtggcgccgctgctgatacccCggatgtctcgcgaggacgccaccgtcgccggctacgacgtccccgccggcacgcgcgtgctcgtcaacacgtggaccatcaaccgcgacccgtcgttgtgggactcgccggaggagttccggccggagcggttcgtgggaagcgggatcgacgtcaagggGcgagacttcgagcttctaccgttcggcacgggccggcggatgtgcccggggtacagcctcggtctcaagaactag
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Protein seq | MELLPSWATFFAVMLATVVFVFLLQAVLLRRRGAYKLPPGPKPWPIIGNLNLIGALPHRSIHEISKRHGPIVQLWFGSCPVVVGSSVEMAKLFLKTNDAVFADRPRTAAGKYTAYDCADIVWSPYGAYWRQARKMCVAELFSARRLESLEHIRHEEVRALLRDLHSAGVAGNAVQLGDHLSMVTLGVISRMVLGKKYVEKQPAGAETASSPPTTPEEFKWMMDELFLMSGVLNIGDFIPWLDWLDLQGYVRRMKKVNRLMHRFLDRVLDEHDERRRLQGDGFVARDMVDVLLQLADDPNLDVQLTQNGVKGITQNLVTGGADTSAVTVEWAMSEVLKNPAILAKATKELDNVVGSGRLVTESDIPHLPYVDAIMKETMRMHPVAPLLIPRMSREDATVAGYDVPAGTRVLVNTWTINRDPSLWDSPEEFRPERFVGSGIDVKGRDFELLPFGTGRRMCPGYSLGLKN
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0264400 | SBH | 0.0 | 0.0 | 0.314725 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g08990 | SBH | 0.0 | 0.0 | 0.080422 |
Nipponbare | IRGSP 1.0 | RAP-db | Os09g0264400 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0002920 | SBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0002930 | SBH | 0.000000 | 0.0 | 0.383463 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0003000 | SBH | 0.0 | 1.169707 | 0.000000 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0002820 | SBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0003020 | SBH | 0.0 | 0.0 | 4.089747 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0079200 | SBH | 0.0198445 | 0 | 0 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0002910 | SBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0081700 | SBH | 1.7687955 | 0.227338 | 0.006835 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0002940 | SBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0002970 | SBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0002970 | SBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0002880 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0002980 | SBH | 0.000000 | 0.000000 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G003090 | SBH | 0.165471 | 0.000000 | 0.000000 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0003040 | SBH | 0.0 | 4.148007 | 0.000000 |