Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0048590 | OGI:99049090 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg366:103361-109584 | ||||||||
| Gene Symbol | OsWD40-165 | ||||||||||
| DNA seq | atcaaatccaatttcacttttatgtagctcagcaaaaaattatgctgtgaaatccgcttgttaagataacagcgacaaatgacgaaccatccaggaacacgacctcaatttgcaatgtgctttgaagtaagaactcacaattcctcggtgaaatatttcaccatcaaaaagtctattctaaacacgaatatttattctgaaatgctctgacatgaggcatggccgatatatatccattcttctagccacagctgctcaaagtagttaatttacataggcaagatgaggttccttggtatcctgagcctggtcttggatttgcacacttttttgtatgaactattaaatttcaaaattttgcacaaatgtaatggccttctctgatcacaaatcaaatctaacatcccatttttccatccatgtaagcattaaaggtccaattgtttttcctgagctggaaataaggcatctgcaatcgaatactttttttatcaaaaattattaccagacatgataaaatgtagtgtaaaaatgacataggtatgcaccaaaaaacagctcatgagattatatatgcaccaaaagtgccccgttgtagatatgctggtgatacaattttagatttaatacataaaatttagtttagagaacaggtttgggtctctcttggagatgctctaaggataccaagaagagggtaactgatgcatctcttgtcttcaataacagcaaaatcctctaaataataaactatgcttgtattaccctagcacaatccacacacgtctggattgaaatacaaaattaagcataattggttaagttggtcattggcaactgttacattcacggacctagcatagttactagtgaaagtaaacaccacgacaccgaaaatttaccctagtgaatcaaacattggtacataaagtctgagcgtaggattttcatgagctgatcaaaaagtccttgagcatatatcaagtgtaacaacagtaaacaaaaatcaagaagggaaatggggagaaagtgaaataaaaactcaaccatgtataatacttatttccttacaatcagtacagatcatggtaaaatatatcatagcaaagtgttgagagacaagaaagaatataagggagttttacctagcgccacttatctcaactgcgtaggggagcagaggaggcctgaagcatctgcaccaaccacagcaagctcacatatggtacaaagctgcccttcgatggaaggaacaaaccgggatccacagtacgggcaggaaacatccttctggccacggtaaattggaacatatgtggcaccacagacgacaaatggatttctgtagtcatagttcagctcacagctatccttctttccactgcactgttgctgcacctgtcgggccctctttgcttggctctcattagggttgttctccagcagcatccttgcaaagtgctctgcagtagcaaagttcttttgcttgtagcacaaacccatagcacttccaagcacaagcctcatatgaactctctgaagcttgcagttagtgaagtaagctgccaattcttgttggcggttgacatcatctctcaattccttcctcttaagttccatcctcaggccaaggacatactccctcacaatctcgatcaactctttcacttcatccacttccctcctcgagtctaccacgataagagggatggtatgcaagatgttaaggaactgcctcagggcttctgggaacttaccttctgtggtggccttgtaggcagccttgagtctgtcttccatttgtgagaaggtgaaaacaagtgcaggagggcctctcacattaggacttgcagactcactccaacctttctcaacagcaaccggaataatgggggcagttgcaagtgcacgaagatatgagtggctgcccatgtgcagatcgagaaataggggcttgagaggagcaaagtttttgatgcccaattgacggctaagcaatctcattgcagtgtcaaagtttcctgctgctgcgtgctccccagcaagagaagatttctgagtccaaatctggctgacaggcatgcctggaggaggagcaacaaagaccactgagagtgcattactggcgtttttaggggtctctgcttcaggcggaagttccaggtcttctaggtcccagccaccttcctcaccatcctcctcatttgcttcaccctcctcagcatcaaaaccatcaccaccattcgccatcgcttcgcttgcatcaaccatatccaggtcctcatcaccccagtcagcaccagcagcttcatcgtcttcctcaagttcagccttcccagtagcatccagtccaccctcaaagataccacgcatcaccctaagcaatggccaatcaccactggctgtgagaggtgcaggggggatcaaaagagagcgagtttttccttcaggtagagaaggaatattttcacccaattcagcagcaagcctatcagcaatttctgtgagtccatgggtggcagcagtaatataagcaagaggtagctgtccagcattctctaggatctcaactctcttcatagcatcaccaagatacagagcattgtggaattgacccatcaggttattgttctgtccagcaattttgcacatgaaccccaccttgtccatgtaaccagtaataagatataggaaagcaagcctctcaaaattctttgtacgttggtacgcatattccacaataccaacgtttccctgcctcagggcctcgattcccaaccggtaccagtgatctttgtcatcaatctctttggcagaagcaactgcaatttggatgttaccactctcaagagctaggttaaatcttgtcttctcatctttcacaaagtggagggcaacttctggaaagcctttctgttgcaaataagaaatcacagcctgcccacacagctgggaattcttaatcatactcatcacatgatcgtatcgtttccgtagaagggccagcttgaaaatgtattcagaagcatcaactgtgatcagcttgttctttccatcacgatctaggcagaaaatattattcccaatagcccttgttatgtaaataggaacgtcaagggttttaatgatcccactatctccattgggaagacaatacttgatatggttcaaagtagtgtaaataaacacaccattctcatcccaggcaccacttttcacacggatggtttcatggagcgtacaacgatggacaagcttcttgtttgctataaccaccgcatgcttgctcagcaatgcaatagattccatatcactcgaccaaacaacatatttaacagcaggtgcctggagctcgccaagaattaacctttgctgcagatcaaagatggtcactcggtcttcagctttgcacagcaagttaccagtcccagcataataaattgcatccgtcgcaataggaagagggcttttctttacaatttcattcttaagattcttcaccagaacttgattgctactcttctcgaggactgcaaacctgttgcgtgcaacaaaaacagctgacccaccagctcccttctttgcctcctgcaaataatcagtcctgccagcagaatccttcggaactatatagagttcataggagcctccatccacatcagagcaaatcaggacggcattttcagttggactatacgacagtgtcctgggtgactgattcaagctgactgatccaggtcttcttattggagccaactgaacctccttctgtgtggagtattcaaagaaccgaagaaaacggtccttcacatagaagacagtatcaccactcacagagaaagctggacgttccctctctaatttaaacacaatcataccattgtcatgaccagcggcaagaagattcatctcagggtgggcagcaagaatccagaaacgatcatgttcccgcctgaatgtttgaataccagttcgcttggtggcatcccagaCacgaatgcttttgtcctctgagttggacacaatgatgtcttgctttgcatggaacatcacgcaggacacattattcatgtgcccccgcaaagtatcaacttcccaagccttggtgtctgtccaaaaatagcacacttagattgcatcatttcaaatacctcaatagtggtatgcatataatagcgtttggccagtctaccaatgtgcagtagaataaagtgctacgcaacaagagtgaccacctttagtcccagctaaagtgatatactctaggtcgggagctagttactaattgagtaattgtgaaacatgtttcttgcattcagcttgtttggtgacaagttagttacttcttctgtatgataaattgaacaaaacaaatgaatctatcatttaaccaaatccattgttttgtagtactgttatatggaaggatgaatggataaaaacataaatatgtaagtgtttatcgatggaaaatgataatcaaaaagttcagggcgtagtagcagtattaccattcattctccatagcttcacttgccggtcatctgccccagaaacaatgagcggcatgtggggtgaaatgacgcccagttcaccccacggtcatgcccttccaacacatattttacaactgcatcaacacctccaaacagatcagtgttcatctgggtgaggcgcaggatgtcatccgcaggtgacaccgtcttcttcctcaaagcaccaatatcccatacacggacagtctgatccagtgatgcggacacaaccagatcctccttgggatggaatgatgcgcacatgacatagtggttatgtccagtcagcacagccacacatgtgcgtgactgccagttccatatcggattgtctggtcatcactagcacttactatccatgggtactcgtggtggaattgcacggtgcgaatgtagtcaaggtgcccatgaagtgtgaagaggcagcggtgtgtcttgtaattccacaccttaatcttgtaatcatcacctgcaatgcatgacagaaatcttagaatctacgattcaacaattccatatcccaatcgtattagcccacagctatcccagaaatacaaccaggcggaacaccagtgtgacttaggccctgtttctttcagcttgggattattataatccagattattgggagtaagttgaaagaaacagacaacttattgaagtagcttattataatctggagcccagcttattataatctgataagctcatttaggtgagcattttccagattattgggtgaaaaattacccaccatgccaccccactccctctttagacttgcaaacccaataatctaggctctaataatctaggaaagaaacaactaaccgtttattctactacagattacaacaatctagcttatagtaatctgactcaataatctagattataataatcccaagctgaaagaaacagggccttagtttcaagtttcaacagatcccgaaattgaggtttcaacaaattccaaagttccatgatggcacctcgccattgctaacttgctatggtatcagattcacaactataaaagctgcttctctctagttaaggcctacacatcgactcatatcttacctcttgtttgaaaggattgcggaaatcaatggagatctcggtcataaatagaaacaaaatgtcacctgaaggtcttaaaactaacaacacagtggtcttaagctagcatgatagaagaagcaacaccagatccgaccaacaaaatggcacttgcacaaccaaagcagacctaatcgtagacctcgggtgttgccattgcagcatgcagaaatctaacgccctcaataccgacgtggatccaaccaaacgcgcgaaaggcaataaaagagcacagcaaatgggcgagatctaggaggaatgaatgattgactgacctccggagacgaagagcggctgggtggcgtggaagtggacgccgcggacggggccgtcgtgctcgtcgaagcggtcgaggagggtgcccatgcggtagtcccacatctggatcaccccgctgtggaggctggccaggatccatggccgccgcgggtggaagctcagccccttcacccggttgctcttcgtctcgaacttggtcagcatcttcgctagccgtcccccagcggcggcggcggcggcagcggcaggcgaaaccctagccgctgaggcgagcggaggagagagaga
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| CDS seq | atgccgctcattgtttctggggcagatgaccggcaagtgaagctatggagaatgaatgacaccaaggcttgggaagttgatactttgcgggggcacatgaataatgtgtcctgcgtgatgttccatgcaaagcaagacatcattgtgtccaactcagaggacaaaagcattcgtGtctgggatgccaccaagcgaactggtattcaaacattcaggcgggaacatgatcgtttctggattcttgctgcccaccctgagatgaatcttcttgccgctggtcatgacaatggtatgattgtgtttaaattagagagggaacgtccagctttctctgtgagtggtgatactgtcttctatgtgaaggaccgttttcttcggttctttgaatactccacacagaaggaggttcagttggctccaataagaagacctggatcagtcagcttgaatcagtcacccaggacactgtcgtatagtccaactgaaaatgccgtcctgatttgctctgatgtggatggaggctcctatgaactctatatagttccgaaggattctgctggcaggactgattatttgcaggaggcaaagaagggagctggtgggtcagctgtttttgttgcacgcaacaggtttgcagtcctcgagaagagtagcaatcaagttctggtgaagaatcttaagaatgaaattgtaaagaaaagccctcttcctattgcgacggatgcaatttattatgctgggactggtaacttgctgtgcaaagctgaagaccgagtgaccatctttgatctgcagcaaaggttaattcttggcgagctccaggcacctgctgttaaatatgttgtttggtcgagtgatatggaatctattgcattgctgagcaagcatgcggtggttatagcaaacaagaagcttgtccatcgttgtacgctccatgaaaccatccgtgtgaaaagtggtgcctgggatgagaatggtgtgtttatttacactactttgaaccatatcaagtattgtcttcccaatggagatagtgggatcattaaaacccttgacgttcctatttacataacaagggctattgggaataatattttctgcctagatcgtgatggaaagaacaagctgatcacagttgatgcttctgaatacattttcaagctggcccttctacggaaacgatacgatcatgtgatgagtatgattaagaattcccagctgtgtgggcaggctgtgatttcttatttgcaacagaaaggctttccagaagttgccctccactttgtgaaagatgagaagacaagatttaacctagctcttgagagtggtaacatccaaattgcagttgcttctgccaaagagattgatgacaaagatcactggtaccggttgggaatcgaggccctgaggcagggaaacgttggtattgtggaatatgcgtaccaacgtacaaagaattttgagaggcttgctttcctatatcttattactggttacatggacaaggtggggttcatgtgcaaaattgctggacagaacaataacctgatgggtcaattccacaatgctctgtatcttggtgatgctatgaagagagttgagatcctagagaatgctggacagctacctcttgcttatattactgctgccacccatggactcacagaaattgctgataggcttgctgctgaattgggtgaaaatattccttctctacctgaaggaaaaactcgctctcttttgatcccccctgcacctctcacagccagtggtgattggccattgcttagggtgatgcgtggtatctttgagggtggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgactggggtgatgaggacctggatatggttgatgcaagcgaagcgatggcgaatggtggtgatggttttgatgctgaggagggtgaagcaaatgaggaggatggtgaggaaggtggctgggacctagaagacctggaacttccgcctgaagcagagacccctaaaaacgccagtaatgcactctcagtggtctttgttgctcctcctccaggcatgcctgtcagccagatttggactcagaaatcttctcttgctggggagcacgcagcagcaggaaactttgacactgcaatgagattgcttagccgtcaattgggcatcaaaaactttgctcctctcaagcccctatttctcgatctgcacatgggcagccactcatatcttcgtgcacttgcaactgcccccattattccggttgctgttgagaaaggttggagtgagtctgcaagtcctaatgtgagaggccctcctgcacttgttttcaccttctcacaaatggaagacagactcaaggctgcctacaaggccaccacagaaggtaagttcccagaagccctgaggcagttccttaacatcttgcataccatccctcttatcgtggtagactcgaggagggaagtggatgaagtgaaagagttgatcgagattgtgagggagtatgtccttggcctgaggatggaacttaagaggaaggaattgagagatgatgtcaaccgccaacaagaattggcagcttacttcactaactgcaagcttcagagagttcatatgaggcttgtgcttggaagtgctatgggtttgtgctacaagcaaaagaactttgctactgcagagcactttgcaaggatgctgctggagaacaaccctaatgagagccaagcaaagagggcccgacaggtgcagcaacagtgcagtggaaagaaggatagctgtgagctgaactatgactacagaaatccatttgtcgtctgtggtgccacatatgttccaatttaccgtggccagaaggatgtttcctgcccgtactgtggatcccggtttgttccttccatcgaagggcagctttgtaccatatgtgagcttgctgtggttggtgcagatgcttcaggcctcctctgctcccctacgcagttgagataa
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| Protein seq | MPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAAHPEMNLLAAGHDNGMIVFKLERERPAFSVSGDTVFYVKDRFLRFFEYSTQKEVQLAPIRRPGSVSLNQSPRTLSYSPTENAVLICSDVDGGSYELYIVPKDSAGRTDYLQEAKKGAGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIVKKSPLPIATDAIYYAGTGNLLCKAEDRVTIFDLQQRLILGELQAPAVKYVVWSSDMESIALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITRAIGNNIFCLDRDGKNKLITVDASEYIFKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGYMDKVGFMCKIAGQNNNLMGQFHNALYLGDAMKRVEILENAGQLPLAYITAATHGLTEIADRLAAELGENIPSLPEGKTRSLLIPPAPLTASGDWPLLRVMRGIFEGGLDATGKAELEEDDEAAGADWGDEDLDMVDASEAMANGGDGFDAEEGEANEEDGEEGGWDLEDLELPPEAETPKNASNALSVVFVAPPPGMPVSQIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKPLFLDLHMGSHSYLRALATAPIIPVAVEKGWSESASPNVRGPPALVFTFSQMEDRLKAAYKATTEGKFPEALRQFLNILHTIPLIVVDSRREVDEVKELIEIVREYVLGLRMELKRKELRDDVNRQQELAAYFTNCKLQRVHMRLVLGSAMGLCYKQKNFATAEHFARMLLENNPNESQAKRARQVQQQCSGKKDSCELNYDYRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSIEGQLCTICELAVVGADASGLLCSPTQLR |
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| Function | Coatomer subunit alpha-3 [UniProtKB/Swiss-Prot:Q0J3D9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0048590 | OsLiXu_Ung0048590.03 | ChrUN-Ctg366 | 105871 | 109584 | - | NAM | ||
| CDS seq | atgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgcggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttccacgccacccagccgctcttcgtctccggaggtgatgattacaagattaaggtgtggaattacaagacacaccgctgcctcttcacacttcatgggcaccttgactacattcgcaccgtgcaattccaccacgagtacccatggatagtaagtgctagtgatgaccagacaatccgatatggaactggcagtcacgcacatgtgtggctgtgctga
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| Protein seq | MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRYGTGSHAHVWLC |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0048590 | OsLiXu_Ung0048590.02 | ChrUN-Ctg366 | 103361 | 109584 | - | NAM | ||
| CDS seq | atgccgctcattgtttctggggcagatgaccggcaagtgaagctatggagaatgaatgacaccaaggcttgggaagttgatactttgcgggggcacatgaataatgtgtcctgcgtgatgttccatgcaaagcaagacatcattgtgtccaactcagaggacaaaagcattcgtGtctgggatgccaccaagcgaactggtattcaaacattcaggcgggaacatgatcgtttctggattcttgctgcccaccctgagatgaatcttcttgccgctggtcatgacaatggtatgattgtgtttaaattagagagggaacgtccagctttctctgtgagtggtgatactgtcttctatgtgaaggaccgttttcttcggttctttgaatactccacacagaaggaggttcagttggctccaataagaagacctggatcagtcagcttgaatcagtcacccaggacactgtcgtatagtccaactgaaaatgccgtcctgatttgctctgatgtggatggaggctcctatgaactctatatagttccgaaggattctgctggcaggactgattatttgcaggaggcaaagaagggagctggtgggtcagctgtttttgttgcacgcaacaggtttgcagtcctcgagaagagtagcaatcaagttctggtgaagaatcttaagaatgaaattgtaaagaaaagccctcttcctattgcgacggatgcaatttattatgctgggactggtaacttgctgtgcaaagctgaagaccgagtgaccatctttgatctgcagcaaaggttaattcttggcgagctccaggcacctgctgttaaatatgttgtttggtcgagtgatatggaatctattgcattgctgagcaagcatgcggtggttatagcaaacaagaagcttgtccatcgttgtacgctccatgaaaccatccgtgtgaaaagtggtgcctgggatgagaatggtgtgtttatttacactactttgaaccatatcaagtattgtcttcccaatggagatagtgggatcattaaaacccttgacgttcctatttacataacaagggctattgggaataatattttctgcctagatcgtgatggaaagaacaagctgatcacagttgatgcttctgaatacattttcaagctggcccttctacggaaacgatacgatcatgtgatgagtatgattaagaattcccagctgtgtgggcaggctgtgatttcttatttgcaacagaaaggctttccagaagttgccctccactttgtgaaagatgagaagacaagatttaacctagctcttgagagtggtaacatccaaattgcagttgcttctgccaaagagattgatgacaaagatcactggtaccggttgggaatcgaggccctgaggcagggaaacgttggtattgtggaatatgcgtaccaacgtacaaagaattttgagaggcttgctttcctatatcttattactggttacatggacaaggtggggttcatgtgcaaaattgctggacagaacaataacctgatgggtcaattccacaatgctctgtatcttggtgatgctatgaagagagttgagatcctagagaatgctggacagctacctcttgcttatattactgctgccacccatggactcacagaaattgctgataggcttgctgctgaattgggtgaaaatattccttctctacctgaaggaaaaactcgctctcttttgatcccccctgcacctctcacagccagtggtgattggccattgcttagggtgatgcgtggtatctttgagggtggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgactggggtgatgaggacctggatatggttgatgcaagcgaagcgatggcgaatggtggtgatggttttgatgctgaggagggtgaagcaaatgaggaggatggtgaggaaggtggctgggacctagaagacctggaacttccgcctgaagcagagacccctaaaaacgccagtaatgcactctcagtggtctttgttgctcctcctccaggcatgcctgtcagccagatttggactcagaaatcttctcttgctggggagcacgcagcagcaggaaactttgacactgcaatgagattgcttagccgtcaattgggcatcaaaaactttgctcctctcaagcccctatttctcgatctgcacatgggcagccactcatatcttcgtgcacttgcaactgcccccattattccggttgctgttgagaaaggttggagtgagtctgcaagtcctaatgtgagaggccctcctgcacttgttttcaccttctcacaaatggaagacagactcaaggctgcctacaaggccaccacagaaggtaagttcccagaagccctgaggcagttccttaacatcttgcataccatccctcttatcgtggtagactcgaggagggaagtggatgaagtgaaagagttgatcgagattgtgagggagtatgtccttggcctgaggatggaacttaagaggaaggaattgagagatgatgtcaaccgccaacaagaattggcagcttacttcactaactgcaagcttcagagagttcatatgaggcttgtgcttggaagtgctatgggtttgtgctacaagcaaaagaactttgctactgcagagcactttgcaaggatgctgctggagaacaaccctaatgagagccaagcaaagagggcccgacaggtgcagcaacagtgcagtggaaagaaggatagctgtgagctgaactatgactacagaaatccatttgtcgtctgtggtgccacatatgttccaatttaccgtggccagaaggatgtttcctgcccgtactgtggatcccggtttgttccttccatcgaagggcagctttgtaccatatgtgagcttgctgtggttggtgcagatgcttcaggcctcctctgctcccctacgcagttgagataa
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| Protein seq | MPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAAHPEMNLLAAGHDNGMIVFKLERERPAFSVSGDTVFYVKDRFLRFFEYSTQKEVQLAPIRRPGSVSLNQSPRTLSYSPTENAVLICSDVDGGSYELYIVPKDSAGRTDYLQEAKKGAGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIVKKSPLPIATDAIYYAGTGNLLCKAEDRVTIFDLQQRLILGELQAPAVKYVVWSSDMESIALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITRAIGNNIFCLDRDGKNKLITVDASEYIFKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGYMDKVGFMCKIAGQNNNLMGQFHNALYLGDAMKRVEILENAGQLPLAYITAATHGLTEIADRLAAELGENIPSLPEGKTRSLLIPPAPLTASGDWPLLRVMRGIFEGGLDATGKAELEEDDEAAGADWGDEDLDMVDASEAMANGGDGFDAEEGEANEEDGEEGGWDLEDLELPPEAETPKNASNALSVVFVAPPPGMPVSQIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKPLFLDLHMGSHSYLRALATAPIIPVAVEKGWSESASPNVRGPPALVFTFSQMEDRLKAAYKATTEGKFPEALRQFLNILHTIPLIVVDSRREVDEVKELIEIVREYVLGLRMELKRKELRDDVNRQQELAAYFTNCKLQRVHMRLVLGSAMGLCYKQKNFATAEHFARMLLENNPNESQAKRARQVQQQCSGKKDSCELNYDYRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSIEGQLCTICELAVVGADASGLLCSPTQLR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0048590 | OsLiXu_Ung0048590.01 | ChrUN-Ctg366 | 103361 | 109584 | - | NAM | ||
| CDS seq | atgccgctcattgtttctggggcagatgaccggcaagtgaagctatggagaatgaatgacaccaaggcttgggaagttgatactttgcgggggcacatgaataatgtgtcctgcgtgatgttccatgcaaagcaagacatcattgtgtccaactcagaggacaaaagcattcgtGtctgggatgccaccaagcgaactggtattcaaacattcaggcgggaacatgatcgtttctggattcttgctgcccaccctgagatgaatcttcttgccgctggtcatgacaatggtatgattgtgtttaaattagagagggaacgtccagctttctctgtgagtggtgatactgtcttctatgtgaaggaccgttttcttcggttctttgaatactccacacagaaggaggttcagttggctccaataagaagacctggatcagtcagcttgaatcagtcacccaggacactgtcgtatagtccaactgaaaatgccgtcctgatttgctctgatgtggatggaggctcctatgaactctatatagttccgaaggattctgctggcaggactgattatttgcaggaggcaaagaagggagctggtgggtcagctgtttttgttgcacgcaacaggtttgcagtcctcgagaagagtagcaatcaagttctggtgaagaatcttaagaatgaaattgtaaagaaaagccctcttcctattgcgacggatgcaatttattatgctgggactggtaacttgctgtgcaaagctgaagaccgagtgaccatctttgatctgcagcaaaggttaattcttggcgagctccaggcacctgctgttaaatatgttgtttggtcgagtgatatggaatctattgcattgctgagcaagcatgcggtggttatagcaaacaagaagcttgtccatcgttgtacgctccatgaaaccatccgtgtgaaaagtggtgcctgggatgagaatggtgtgtttatttacactactttgaaccatatcaagtattgtcttcccaatggagatagtgggatcattaaaacccttgacgttcctatttacataacaagggctattgggaataatattttctgcctagatcgtgatggaaagaacaagctgatcacagttgatgcttctgaatacattttcaagctggcccttctacggaaacgatacgatcatgtgatgagtatgattaagaattcccagctgtgtgggcaggctgtgatttcttatttgcaacagaaaggctttccagaagttgccctccactttgtgaaagatgagaagacaagatttaacctagctcttgagagtggtaacatccaaattgcagttgcttctgccaaagagattgatgacaaagatcactggtaccggttgggaatcgaggccctgaggcagggaaacgttggtattgtggaatatgcgtaccaacgtacaaagaattttgagaggcttgctttcctatatcttattactggttacatggacaaggtggggttcatgtgcaaaattgctggacagaacaataacctgatgggtcaattccacaatgctctgtatcttggtgatgctatgaagagagttgagatcctagagaatgctggacagctacctcttgcttatattactgctgccacccatggactcacagaaattgctgataggcttgctgctgaattgggtgaaaatattccttctctacctgaaggaaaaactcgctctcttttgatcccccctgcacctctcacagccagtggtgattggccattgcttagggtgatgcgtggtatctttgagggtggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgactggggtgatgaggacctggatatggttgatgcaagcgaagcgatggcgaatggtggtgatggttttgatgctgaggagggtgaagcaaatgaggaggatggtgaggaaggtggctgggacctagaagacctggaacttccgcctgaagcagagacccctaaaaacgccagtaatgcactctcagtggtctttgttgctcctcctccaggcatgcctgtcagccagatttggactcagaaatcttctcttgctggggagcacgcagcagcaggaaactttgacactgcaatgagattgcttagccgtcaattgggcatcaaaaactttgctcctctcaagcccctatttctcgatctgcacatgggcagccactcatatcttcgtgcacttgcaactgcccccattattccggttgctgttgagaaaggttggagtgagtctgcaagtcctaatgtgagaggccctcctgcacttgttttcaccttctcacaaatggaagacagactcaaggctgcctacaaggccaccacagaaggtaagttcccagaagccctgaggcagttccttaacatcttgcataccatccctcttatcgtggtagactcgaggagggaagtggatgaagtgaaagagttgatcgagattgtgagggagtatgtccttggcctgaggatggaacttaagaggaaggaattgagagatgatgtcaaccgccaacaagaattggcagcttacttcactaactgcaagcttcagagagttcatatgaggcttgtgcttggaagtgctatgggtttgtgctacaagcaaaagaactttgctactgcagagcactttgcaaggatgctgctggagaacaaccctaatgagagccaagcaaagagggcccgacaggtgcagcaacagtgcagtggaaagaaggatagctgtgagctgaactatgactacagaaatccatttgtcgtctgtggtgccacatatgttccaatttaccgtggccagaaggatgtttcctgcccgtactgtggatcccggtttgttccttccatcgaagggcagctttgtaccatatgtgagcttgctgtggttggtgcagatgcttcaggcctcctctgctcccctacgcagttgagataa
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| Protein seq | MPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAAHPEMNLLAAGHDNGMIVFKLERERPAFSVSGDTVFYVKDRFLRFFEYSTQKEVQLAPIRRPGSVSLNQSPRTLSYSPTENAVLICSDVDGGSYELYIVPKDSAGRTDYLQEAKKGAGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIVKKSPLPIATDAIYYAGTGNLLCKAEDRVTIFDLQQRLILGELQAPAVKYVVWSSDMESIALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITRAIGNNIFCLDRDGKNKLITVDASEYIFKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGYMDKVGFMCKIAGQNNNLMGQFHNALYLGDAMKRVEILENAGQLPLAYITAATHGLTEIADRLAAELGENIPSLPEGKTRSLLIPPAPLTASGDWPLLRVMRGIFEGGLDATGKAELEEDDEAAGADWGDEDLDMVDASEAMANGGDGFDAEEGEANEEDGEEGGWDLEDLELPPEAETPKNASNALSVVFVAPPPGMPVSQIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKPLFLDLHMGSHSYLRALATAPIIPVAVEKGWSESASPNVRGPPALVFTFSQMEDRLKAAYKATTEGKFPEALRQFLNILHTIPLIVVDSRREVDEVKELIEIVREYVLGLRMELKRKELRDDVNRQQELAAYFTNCKLQRVHMRLVLGSAMGLCYKQKNFATAEHFARMLLENNPNESQAKRARQVQQQCSGKKDSCELNYDYRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSIEGQLCTICELAVVGADASGLLCSPTQLR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | ChrUN-Ctg366 | 103829 | 104506 | - | OsLiXu_Ung0048590.01 | OsLiXu_Ung0048590.01,OsLiXu_Ung0048590.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 1.413492 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0127800 | SBH | 4.229715 | 3.327656 | 11.543898 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g04110 | SBH | 2.200206 | 1.665551 | 2.342168 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0127800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0001250 | SBH | 1.164123 | 18.377028 | 16.861437 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0001220 | SBH | 0.319842 | 6.584761 | 3.824685 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0001270 | SBH | 1.660131 | 27.113075 | 17.791767 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0001160 | SBH | 0.371364 | 1.861250 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0001350 | SBH | 10.313492 | 71.527779 | 27.896049 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0030800 | SBH | 16.3994595 | 21.786618 | 21.661698 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0001350 | SBH | 0.250580 | 3.257095 | 2.628271 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0040400 | SBH | 15.9024005 | 13.151414 | 39.55554 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0001290 | SBH | 0.400820 | 0.404110 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0001280 | SBH | 0.725676 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0001400 | SBH | 7.360044 | 36.210701 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0001281 | RBH | 0.455780 | 0.0 | 1.858104 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0001310 | SBH | 0.298787 | 23.356428 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G001360 | SBH | 0.869258 | 22.895742 | 6.972977 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0001320 | SBH | 1.774750 | 31.183863 | 15.914477 |
