Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0042710 | OGI:99044380 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg314:62680-62970 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTATGCTTTGCGCAATCTGCTTGTCTCCTCAAACACATCTACTAGTAAAGAAGGGCTAGTTCTTTTCAGATTTGCATAACCTCCTGTTGCCGCAACAGCATCCATCGCATTTGAAGAGGCCATAAATTCAATGCAAACCTTCTTAAGCTTGTCACAGCTATGCTGATCAGCCAAAGCCAATGTAGTTGCCACATTGTCCACATGAAGACTCTTGCCAAGGATGTGTTGGCAAATCAACTTGAGCCTGTCCATGGCATATCTATCCGCAGCCACAAGTAAATGCCGGATCAT |
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| CDS seq | ATGATCCGGCATTTACTTGTGGCTGCGGATAGATATGCCATGGACAGGCTCAAGTTGATTTGCCAACACATCCTTGGCAAGAGTCTTCATGTGGACAATGTGGCAACTACATTGGCTTTGGCTGATCAGCATAGCTGTGACAAGCTTAAGAAGGTTTGCATTGAATTTATGGCCTCTTCAAATGCGATGGATGCTGTTGCGGCAACAGGAGGTTATGCAAATCTGAAAAGAACTAGCCCTTCTTTACTAGTAGATGTGTTTGAGGAGACAAGCAGATTGCGCAAAGCATAG |
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| Protein seq | MIRHLLVAADRYAMDRLKLICQHILGKSLHVDNVATTLALADQHSCDKLKKVCIEFMASSNAMDAVAATGGYANLKRTSPSLLVDVFEETSRLRKA |
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| Function | BTB/POZ and MATH domain-containing protein 1 [UniProtKB/Swiss-Prot:Q8L765] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0042710 | OsLiXu_Ung0042710.01 | ChrUN-Ctg314 | 62680 | 62970 | - | NAM | ||
| CDS seq | ATGATCCGGCATTTACTTGTGGCTGCGGATAGATATGCCATGGACAGGCTCAAGTTGATTTGCCAACACATCCTTGGCAAGAGTCTTCATGTGGACAATGTGGCAACTACATTGGCTTTGGCTGATCAGCATAGCTGTGACAAGCTTAAGAAGGTTTGCATTGAATTTATGGCCTCTTCAAATGCGATGGATGCTGTTGCGGCAACAGGAGGTTATGCAAATCTGAAAAGAACTAGCCCTTCTTTACTAGTAGATGTGTTTGAGGAGACAAGCAGATTGCGCAAAGCATAG
More
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| Protein seq | MIRHLLVAADRYAMDRLKLICQHILGKSLHVDNVATTLALADQHSCDKLKKVCIEFMASSNAMDAVAATGGYANLKRTSPSLLVDVFEETSRLRKA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0011350 | SBH | 0.036137 | 0.000000 | 0.309649 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0011640 | SBH | 0.0 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0011340 | SBH | 0.000000 | 0.845379 | 0.432470 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0007620 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0022410 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0253800 | SBH | 0.2806765 | 0.3109105 | 1.1770635 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0011470 | SBH | 0.000000 | 0.022633 | 0.055922 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0116600 | SBH | 0.023118 | 0 | 0.0098655 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0011230 | SBH | 0.0 | 0.016804 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0011180 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0007000 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0022610 | SBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0007080 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G007380 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0011470 | SBH | 0.0 | 0.0 | 7.660278 |
