Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0014470 | OGI:99023940 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg108:19292-23940 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ggatcagcaacatataatttcatttcgcagatcgattcattcatctctctgatcctttggcttacactacaaaatttgtgcttcgattcacactccagagtccagaatgacaaaatggttgtctacgaaaatttctggccgcttgcatttcaagcaccgcgcacccttgtgctccacttattctcaaaatctcagttacagattacacaacactgaaatgaaaaggaaaaagagaaacaagtctaactcctatatgcacagttttttcacctagaggcatcaggagatgcgcatcagaggatgaattatacacaccgagatgaaatctcagtagcatgtattgctaatctgtggtgaattctacagaactgcatccttttccaactctaccgggtcagggagaatctcccttgaagccctcttgaaggagaatgaatcctcctcctcgtcctcatcctcgtcacttccttgtgacttcactgactgcttcctggctgactgccccaatgttggcctgagctccgagctcctgcaagagtccccatgaaaagcaaaatgccaagagcttcgagatgaagtactcgtgagtgatgaattcgactgtaattcctccctcaccacccgcagcgggttctccaatgctttcaggatgtaccgagccagtggacgcctggagggctttgggttcaggcatgtcttcgcaacaatggagactgcccatacctcttctaggtggtcttcatctactacaagtgaagggtctacaatgtttgaaagaccctccttgtcatgggcgtcaatgaaatccagtgttcttgccaaccactcctctgaaccagtgtcatttgagccgctcacaccaaaattcccggtgattagctccagtagcacctttccaaagcagtatacatcatacgagcagctagctggtggacctgttaggtgagagatacatacagtaatgttaggttatctttattttgcgcattagaattcctacacaaatagctgtatagtataatggtagagattataaaatatccataaaaaagttatgcagaagctttacacacctgatgcgttcttgtcaagagacctgccacaagaaagagacgaatatcagtgtttaagcaaggccccgtttacagatttaaacaaagactaaagtttcatagcaaacgtgatgttgccatgttaacaaaataacaagtgggttgccatattttatgatctgcaggtggtagggtttcttcttttatttgtgtgggtctggccattaatttacaagactaactcttgatgagaacttcctttttagaagtcatttgacaagaattcatgtaaggagaaacacttacaaatgaatatgtgtccccttatacatactcaaacccaaaaaaaaaacactgccgccatattttgttaacaaaatccagtacattaccttcagttataactaaacttaggttaaagtgttaacttcataaagaagttattgcttttgtcttagtactttttagtgctaaaggcacccttaagttagcaccattcaggtgatcataaaatcaagtttcttttaaaaggaatatgccatgatggactcaattttcagagcaattggtaagatcataagaacagttgtacccatgctaaactcatgcataaaaatgaggagacgataaaatataaaagtcttacttcgatgatctcaacatcctggagaagaaactcctgcttccctcactttgttgagtgcatacatcactcaaacttccaagacacacttcaaatttgtcatcaagaagcacactgcttgcctggatatctctacagttataatgaaaagataaggggaaaaaagattggcttgaaagtaattaaaacatccaagaacttgaacagcatgcatcaaataagaactgcagagtaaaataaaatgaaatagaaagatgaagcagctaagtcatgcagctggaataaaagatgactagcaccaaatacatcgatatttagtgcattgagttacctacaatgattgatgacactaaacctcaaaagataagtttccataaaataactgcagcaattttttttcatgatagagacatgagtttctcacatagttagacagtgtataatcatataatgaattatacatactgtacagtacttatacttgcatgaaactttcctgatttcctacaatacattgcacatgagaagttgtgaacaagccatatgcacatgaataacaagaagcaacattctaaaagttcagaaagggaagcagttcgtctgggggaaaatcattaaaaatcaattaagtacagtcagatagtattggtagtgctgatatggatccaatgcaacttggtgaaatagtccgtataatattatattttaaatgtgggatttcatgtcctcacaagtaaacagtttgtcagggaagcttcgcacatattgttttcccctttcagctatacttcttagaaaagaaatagtgggccaactgatgcaatagggccacaagaagctaagtagaagactatcaaatgtgtaactagaaacagttttaaattaatatattaaattgtcctgtttctttcactcacgcacttgccataatcagtgcagcttcttcattaaattggcaattcatgtgagctaaataacatgtggaacttccgcgctcttttttatgatggcgttaatgttcaaacttttcttagcacagttatcatatgctttttgcaattaaaatattttcactaactataaaccaatcagctgcacattatattagcaaattagctaacaggccaataatatcactaggcatacctgtgaaccaatggtggactacactcatcgtgcaggaagcacaatgcctcagcaacaccaatggcgatcttcagccttgttatccaatccaacgagcgcagcccctcctcagcatccactgacttcctgtgcaatgcggaagtcaagtctccctttgccatgtacttgtagaccagcaattcctcctcatctgtggccaaatgccccagcaatggaacaatcctcccatgggaattctttgcaaggaagcccaattcccccaagttcttattactgctcttcagatcaacctttttgacaacaacattgaagccactctccagttcaccaaggtaaatggccccagagtgcccatgcttgacaagattgtcatccccaaaacccccagtaacattatgcaactgctcataggtgaactcatctacaatggtaggcagacctttcacagcaccatttgctgccagtgattctgccatggatgacagcatcacaggattaacgctgctactcctgcgccccgaacgaatcccttcctcattctgctccaaccctcttcctctcagtcgctgtcccccactcttcatcaagcagaacactaatgctacaaggaaaagaaccaccaaaaatgctgcggctgccaggactccggcaagtacatacttccacttcacccctttcttgcttggtgatggcaatgcatttggtggctctggcaatgaaacaccaatcctcttgtagaatgcttcacaatccccctggcttcgctggcttgatccggacaagcaattcatgtttatgtccactgctccatcggagctgttcccaaatccagttccaatcacctcagtgaagtaatttctcgataaatcaacctgacgaaatctcttcctgaggggcccaagcacatctccaatggcaccgtacaacgaattcccggaagcgttgaaaactccggttccatcaccggcagagatagacacgtttggtagctccccggtgagattgttgtcagaaagatcgagaaatttgaggcccttgatgaggaacaatgtcgccggaatcgagccggagatgctattaccggcgaggtcaagggtcgtcaggttcccggacatgccaagatcggctggaagcgtgccattgacggaggtggagcggaggtccaagacttccagcgacgccgggaggccggtgccaaaccacgccgggatccgaccagggagcgggaaccccgaggcgttgaaaacctcgagcgccgtgagctcccgcagcgggtcgacggtgaacccctggctccgtgcacccgcgcgggtgcggcggagcccggtgagacggagctccgcgacgcgcccggcgcggcacacgacgccagtccagctgcagggatagcgcttcaccggccagtactccgcccgcaccccgatcgacccgcgcaggccgtggagcgcgagcacgtcctgcctcgcgagcagcagccgccgccgctcctccccccgcgcggcgtgggacgcgacgagcaggagaaccgcgacggcgacgaggcagcgcgggagcatggggacggacgaggaaacagcaccgcgcggcagggtagaggagaggagtggcgtggcggtggcggtggcggccacctcatggcgcgggcgcggcggccatggcgagagcgggagcgagcgaagtggaggtggaggtggtggcgtggtgcgcgcaaggtgttcgcctttttgggcggcctcctgcctgcctatttcggcttccggcgagttgaccacgcggagcccgcgggggacgcgggtggagaccaccat
More
|
||||||||||
| CDS seq | atgctcccgcgctgcctcgtcgccgtcgcggttctcctgctcgtcgcgtcccacgccgcgcggggggaggagcggcggcggctgctgctcgcgaggcaggacgtgctcgcgctccacggcctgcgcgggtcgatcggggtgcgggcggagtactggccggtgaagcgctatccctgcagctggactggcgtcgtgtgccgcgccgggcgcgtcgcggagctccgtctcaccgggctccgccgcacccgcgcgggtgcacggagccaggggttcaccgtcgacccgctgcgggagctcacggcgctcgaggttttcaacgcctcggggttcccgctccctggtcggatcccggcgtggtttggcaccggcctcccggcgtcgctggaagtcttggacctccgctccacctccgtcaatggcacgcttccagccgatcttggcatgtccgggaacctgacgacccttgacctcgccggtaatagcatctccggctcgattccggcgacattgttcctcatcaagggcctcaaatttctcgatctttctgacaacaatctcaccggggagctaccaaacgtgtctatctctgccggtgatggaaccggagttttcaacgcttccgggaattcgttgtacggtgccattggagatgtgcttgggcccctcaggaagagatttcgtcaggttgatttatcgagaaattacttcactgaggtgattggaactggatttgggaacagctccgatggagcagtggacataaacatgaattgcttgtccggatcaagccagcgaagccagggggattgtgaagcattctacaagaggattggtgtttcattgccagagccaccaaatgcattgccatcaccaagcaagaaaggggtgaagtggaagtatgtacttgccggagtcctggcagccgcagcatttttggtggttcttttccttgtagcattagtgttctgcttgatgaagagtgggggacagcgactgagaggaagagggttggagcagaatgaggaagggattcgttcggggcgcaggagtagcagcgttaatcctgtgatgctgtcatccatggcagaatcactggcagcaaatggtgctgtgaaaggtctgcctaccattgtagatgagttcacctatgagcagttgcataatgttactgggggttttggggatgacaatcttgtcaagcatgggcactctggggccatttaccttggtgaactggagagtggcttcaatgttgttgtcaaaaaggttgatctgaagagcagtaataagaacttgggggaattgggcttccttgcaaagaattcccatgggaggattgttccattgctggggcatttggccacagatgaggaggaattgctggtctacaagtacatggcaaagggagacttgacttccgcattgcacaggaagtcagtggatgctgaggaggggctgcgctcgttggattggataacaaggctgaagatcgccattggtgttgctgaggcattgtgcttcctgcacgatgagtgtagtccaccattggttcacagagatatccaggcaagcagtgtgcttcttgatgacaaatttgaagtgtgtcttggaagtttgagtgatgtatgcactcaacaaagtgagggaagcaggagtttcttctccaggatgttgagatcatcgaagtctcttgacaagaacgcatcaggtccaccagctagctgctcgtatgatgtatactgctttggaaaggtgctactggagctaatcaccgggaattttggtgtgagcggctcaaatgacactggttcagaggagtggttggcaagaacactggatttcattgacgcccatgacaaggagggtctttcaaacattgtagacccttcacttgtagtagatgaagaccacctagaagaggtatgggcagtctccattgttgcgaagacatgcctgaacccaaagccctccaggcgtccactggctcggtacatcctgaaagcattggagaacccgctgcgggtggtgagggaggaattacagtcgaattcatcactcacgagtacttcatctcgaagctcttggcattttgcttttcatggggactcttgcaggagctcggagctcaggccaacattggggcagtcagccaggaagcagtcagtgaagtcacaaggaagtgacgaggatgaggacgaggaggaggattcattctccttcaagagggcttcaagggagattctccctgacccggtagagttggaaaaggatgcagttctgtag
More
|
||||||||||
| Protein seq | MLPRCLVAVAVLLLVASHAARGEERRRLLLARQDVLALHGLRGSIGVRAEYWPVKRYPCSWTGVVCRAGRVAELRLTGLRRTRAGARSQGFTVDPLRELTALEVFNASGFPLPGRIPAWFGTGLPASLEVLDLRSTSVNGTLPADLGMSGNLTTLDLAGNSISGSIPATLFLIKGLKFLDLSDNNLTGELPNVSISAGDGTGVFNASGNSLYGAIGDVLGPLRKRFRQVDLSRNYFTEVIGTGFGNSSDGAVDINMNCLSGSSQRSQGDCEAFYKRIGVSLPEPPNALPSPSKKGVKWKYVLAGVLAAAAFLVVLFLVALVFCLMKSGGQRLRGRGLEQNEEGIRSGRRSSSVNPVMLSSMAESLAANGAVKGLPTIVDEFTYEQLHNVTGGFGDDNLVKHGHSGAIYLGELESGFNVVVKKVDLKSSNKNLGELGFLAKNSHGRIVPLLGHLATDEEELLVYKYMAKGDLTSALHRKSVDAEEGLRSLDWITRLKIAIGVAEALCFLHDECSPPLVHRDIQASSVLLDDKFEVCLGSLSDVCTQQSEGSRSFFSRMLRSSKSLDKNASGPPASCSYDVYCFGKVLLELITGNFGVSGSNDTGSEEWLARTLDFIDAHDKEGLSNIVDPSLVVDEDHLEEVWAVSIVAKTCLNPKPSRRPLARYILKALENPLRVVREELQSNSSLTSTSSRSSWHFAFHGDSCRSSELRPTLGQSARKQSVKSQGSDEDEDEEEDSFSFKRASREILPDPVELEKDAVL |
||||||||||
| Function | Probable LRR receptor-like serine/threonine-protein kinase At2g16250 [UniProtKB/Swiss-Prot:C0LGK4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0014470 | OsLiXu_Ung0014470.01 | ChrUN-Ctg108 | 19292 | 23940 | - | NAM | ||
| CDS seq | atgctcccgcgctgcctcgtcgccgtcgcggttctcctgctcgtcgcgtcccacgccgcgcggggggaggagcggcggcggctgctgctcgcgaggcaggacgtgctcgcgctccacggcctgcgcgggtcgatcggggtgcgggcggagtactggccggtgaagcgctatccctgcagctggactggcgtcgtgtgccgcgccgggcgcgtcgcggagctccgtctcaccgggctccgccgcacccgcgcgggtgcacggagccaggggttcaccgtcgacccgctgcgggagctcacggcgctcgaggttttcaacgcctcggggttcccgctccctggtcggatcccggcgtggtttggcaccggcctcccggcgtcgctggaagtcttggacctccgctccacctccgtcaatggcacgcttccagccgatcttggcatgtccgggaacctgacgacccttgacctcgccggtaatagcatctccggctcgattccggcgacattgttcctcatcaagggcctcaaatttctcgatctttctgacaacaatctcaccggggagctaccaaacgtgtctatctctgccggtgatggaaccggagttttcaacgcttccgggaattcgttgtacggtgccattggagatgtgcttgggcccctcaggaagagatttcgtcaggttgatttatcgagaaattacttcactgaggtgattggaactggatttgggaacagctccgatggagcagtggacataaacatgaattgcttgtccggatcaagccagcgaagccagggggattgtgaagcattctacaagaggattggtgtttcattgccagagccaccaaatgcattgccatcaccaagcaagaaaggggtgaagtggaagtatgtacttgccggagtcctggcagccgcagcatttttggtggttcttttccttgtagcattagtgttctgcttgatgaagagtgggggacagcgactgagaggaagagggttggagcagaatgaggaagggattcgttcggggcgcaggagtagcagcgttaatcctgtgatgctgtcatccatggcagaatcactggcagcaaatggtgctgtgaaaggtctgcctaccattgtagatgagttcacctatgagcagttgcataatgttactgggggttttggggatgacaatcttgtcaagcatgggcactctggggccatttaccttggtgaactggagagtggcttcaatgttgttgtcaaaaaggttgatctgaagagcagtaataagaacttgggggaattgggcttccttgcaaagaattcccatgggaggattgttccattgctggggcatttggccacagatgaggaggaattgctggtctacaagtacatggcaaagggagacttgacttccgcattgcacaggaagtcagtggatgctgaggaggggctgcgctcgttggattggataacaaggctgaagatcgccattggtgttgctgaggcattgtgcttcctgcacgatgagtgtagtccaccattggttcacagagatatccaggcaagcagtgtgcttcttgatgacaaatttgaagtgtgtcttggaagtttgagtgatgtatgcactcaacaaagtgagggaagcaggagtttcttctccaggatgttgagatcatcgaagtctcttgacaagaacgcatcaggtccaccagctagctgctcgtatgatgtatactgctttggaaaggtgctactggagctaatcaccgggaattttggtgtgagcggctcaaatgacactggttcagaggagtggttggcaagaacactggatttcattgacgcccatgacaaggagggtctttcaaacattgtagacccttcacttgtagtagatgaagaccacctagaagaggtatgggcagtctccattgttgcgaagacatgcctgaacccaaagccctccaggcgtccactggctcggtacatcctgaaagcattggagaacccgctgcgggtggtgagggaggaattacagtcgaattcatcactcacgagtacttcatctcgaagctcttggcattttgcttttcatggggactcttgcaggagctcggagctcaggccaacattggggcagtcagccaggaagcagtcagtgaagtcacaaggaagtgacgaggatgaggacgaggaggaggattcattctccttcaagagggcttcaagggagattctccctgacccggtagagttggaaaaggatgcagttctgtag
More
|
|||||||
| Protein seq | MLPRCLVAVAVLLLVASHAARGEERRRLLLARQDVLALHGLRGSIGVRAEYWPVKRYPCSWTGVVCRAGRVAELRLTGLRRTRAGARSQGFTVDPLRELTALEVFNASGFPLPGRIPAWFGTGLPASLEVLDLRSTSVNGTLPADLGMSGNLTTLDLAGNSISGSIPATLFLIKGLKFLDLSDNNLTGELPNVSISAGDGTGVFNASGNSLYGAIGDVLGPLRKRFRQVDLSRNYFTEVIGTGFGNSSDGAVDINMNCLSGSSQRSQGDCEAFYKRIGVSLPEPPNALPSPSKKGVKWKYVLAGVLAAAAFLVVLFLVALVFCLMKSGGQRLRGRGLEQNEEGIRSGRRSSSVNPVMLSSMAESLAANGAVKGLPTIVDEFTYEQLHNVTGGFGDDNLVKHGHSGAIYLGELESGFNVVVKKVDLKSSNKNLGELGFLAKNSHGRIVPLLGHLATDEEELLVYKYMAKGDLTSALHRKSVDAEEGLRSLDWITRLKIAIGVAEALCFLHDECSPPLVHRDIQASSVLLDDKFEVCLGSLSDVCTQQSEGSRSFFSRMLRSSKSLDKNASGPPASCSYDVYCFGKVLLELITGNFGVSGSNDTGSEEWLARTLDFIDAHDKEGLSNIVDPSLVVDEDHLEEVWAVSIVAKTCLNPKPSRRPLARYILKALENPLRVVREELQSNSSLTSTSSRSSWHFAFHGDSCRSSELRPTLGQSARKQSVKSQGSDEDEDEEEDSFSFKRASREILPDPVELEKDAVL
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0773300 | SBH | 0.640065 | 1.314257 | 3.397294 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g56250 | SBH | 0.469238 | 0.859752 | 0.489437 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0773300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0036410 | SBH | 0.402410 | 3.707710 | 2.078783 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0036080 | SBH | 0.126477 | 2.090867 | 1.419493 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0036160 | SBH | 0.598008 | 5.968019 | 2.189739 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0036450 | SBH | 0.114320 | 0.249811 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0035970 | SBH | 4.040048 | 1.287993 | 17.641598 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0546100 | SBH | 2.7001545 | 28.799406 | 5.482343 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0035770 | SBH | 0.205821 | 0.341742 | 0.263480 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0546800 | SBH | 4.0554 | 28.2951735 | 5.2193555 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0036250 | SBH | 0.000000 | 0.108374 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0036270 | SBH | 0.212263 | 1.107811 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0035920 | SBH | 0.840434 | 5.624218 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0036010 | RBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0035960 | SBH | 0.084243 | 1.606772 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G035770 | SBH | 0.272906 | 0.759389 | 0.379647 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0035550 | SBH | 0.329529 | 2.815567 | 1.114410 |
