Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0013900 | OGI:99023440 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg104:46285-48513 | ||||||||
| Gene Symbol | RLCK115, OsRLCK115 | ||||||||||
| DNA seq | CTAATGATCTCCTGGACGAGCACTGATGAGAGGCTGCAGAGCCTTGACGACGATCGTCATGTTGGGCCTGAAATCAGCCTCGTACTGGACGCACAGCGCCGCCACCGCCGCGAGCTGGGACACATGAACATTTTGATTCGTTCAGAAAATATACCAGATTATACACAGCAAGTTTGCTAAGCCGATCATGACACAAACGACTTGCTGATCTGAAGAAAAAAAACAGTTCAGAATTCAGATAACTACCTTGGCCACTGCCTTTGGTGGGTACTCGTCGTTCAGCTTGGGATCCACGCACTGCTTAACCTTGTCCTCGCTTAACCTTGGAGTGGCCTAGAGATTTTTTTTTTTGACACGGCTTATTAAGAGTCAGTTGAGTGAACAATGAGCACTGTATCTGATATCAAGGCTCGAAAATGGGAACCTTACCCAGGTAACCAAGCTCTGCTGCCCCTTGGGCATGGTGTGATCCACAGGCTTCCTCCCAGTCAAAAGCTCAAGAAGGACAACACCGAAGCTGTAAACATCGCTCTTCTGGGTCAATTGTCCCGTCATTGCATACCTGACATACATAGTGTAGTATATCGTTTAGTTAATTCGTTATGTTATAAGTTGTTCAAAACAGAAATGTATGAGGATCAAACCACAATATTGCAATTGATTACTATTTGTGGTTCTCCTGCTATATTCAATAAAATTGTCACACTCTAAATGCGGGTCCGTTAAAAGCAAAAGAGATTACTATTTGTGTTTGGTCTAGACCATCAAATATATTGAGAACAAATATGTTATACATCTCCAATTTTAATATCACAGTTAAACGATTTGCCACCGATTTCGATAGTCGAGTTCATATTGTCATCGTGGATTCGTGATCGAGCTTACTCTGGCGCGTGGTAGCCGAAGGTGCCGAGCACCTTGGTGGAGTGGAGGCGGGCGGCGGAGTCCGGCGACTGGTTGGTGAGGTTGAAGTCGCCGATCTTGGCGTCGTGGCCGTCGAAGACGAGCACGTTGCTGGAGCGGATGTCGCGGTGGACGATCGGTGGCTGAGCGCGCTCGTGCAGGTACTCCAGTCCCCTCGCCGCGCCGTACGCGATCCGTGCTCGCTGGCTCCACGTCAACACCGGCCCGGGCTCCGCCCCCTTCACCCCCTTCTTCCCTGCAATAATAAAAATCATGAAAACCCCACAATGAGATGCAAAATACCATAAAATTCGGAAAATACTACAGCACGGTATCCGGTTCGAACAGGATAAGGTATTAACTGATACACCGTTTGGACGGAATGATACCTCTGAGGTATTACCTGATACTAGTAAGGTATCAGTTGATATCTAGGTATCAGACAATACCTCTGAGGTATCATCCTGTCCGAACGGGATATGGACCTGTAGTATTTCTCTAAAATTTATGCGTTTCAAACGGGGTTCCTTTAGAACAATTGGTGCAACGACACGTGAATGGTCGTCGTTGATGCACAGCATATGTTGTGATGAGTACTACTAGTAGTGAGTTTAATTTGGTTTTTTTTGTACCGTGGAGGATGTCGTAGAGGGAGCCTTTGGTGGCGAACTCGTAGAGCACGATGCGGTTGTTGAGCTCCAGGCAGTAGCCCAGCAGCTGGGTGAAGTGGTCGCACTTGAGCCTGGACACCACGGACAGCTGCGTGCAGTGCGTGCCGTGTCGTGACCGATAGAGGCAAGAACAAAACACGTACGCGAGTTAGTTTTTGGCGCTGATGAATACTCTTGGAGTAGCATTTGCACTTTTTTTTTTCTTGCTGAATTTGAACCGAATGTGCGGTTTTCTCGTTTACCTGCGCGCAGAAGTCGGCTTCTGACTGGCCGGAGCCGCCGTTGTTGTCGAACATCTTGACGGCGGCGGCCTCGCCGGTGCTCAGCGTGGCGCGGTACACGCGGCCATAGGATCCCTCCCCGACCAGCGACCTGTCGCCGAAGTTGCCGGTGAGACGGTTGAGCTCCGCCAGCGCCACGGCCGGGACGTCGATCGGCAGCACCTTCGCCGGCGCGCCGCCGGCTCTCGGCGCGTTCGGCCCTCTCGGCGGCCCTGCATTCCAAAGTGTCATCACGACGGCCGGCGGCGAACATTACGGACAAATTAATCAACTAGGACTGCGCAATTCGAACCTGGTGCTCGCGGTGGCGGCGCCGCCGGGTTGGCGGCCGGCGCGCCGTGGAGCTCCTCCTCGGCGCCGCTGCAACACCACAT
More
|
||||||||||
| CDS seq | ATGTGGTGTTGCAGCGGCGCCGAGGAGGAGCTCCACGGCGCGCCGGCCGCCAACCCGGCGGCGCCGCCACCGCGAGCACCAGGGCCGCCGAGAGGGCCGAACGCGCCGAGAGCCGGCGGCGCGCCGGCGAAGGTGCTGCCGATCGACGTCCCGGCCGTGGCGCTGGCGGAGCTCAACCGTCTCACCGGCAACTTCGGCGACAGGTCGCTGGTCGGGGAGGGATCCTATGGCCGCGTGTACCGCGCCACGCTGAGCACCGGCGAGGCCGCCGCCGTCAAGATGTTCGACAACAACGGCGGCTCCGGCCAGTCAGAAGCCGACTTCTGCGCGCAGCTGTCCGTGGTGTCCAGGCTCAAGTGCGACCACTTCACCCAGCTGCTGGGCTACTGCCTGGAGCTCAACAACCGCATCGTGCTCTACGAGTTCGCCACCAAAGGCTCCCTCTACGACATCCTCCACGGGAAGAAGGGGGTGAAGGGGGCGGAGCCCGGGCCGGTGTTGACGTGGAGCCAGCGAGCACGGATCGCGTACGGCGCGGCGAGGGGACTGGAGTACCTGCACGAGCGCGCTCAGCCACCGATCGTCCACCGCGACATCCGCTCCAGCAACGTGCTCGTCTTCGACGGCCACGACGCCAAGATCGGCGACTTCAACCTCACCAACCAGTCGCCGGACTCCGCCGCCCGCCTCCACTCCACCAAGGTGCTCGGCACCTTCGGCTACCACGCGCCAGAGTATGCAATGACGGGACAATTGACCCAGAAGAGCGATGTTTACAGCTTCGGTGTTGTCCTTCTTGAGCTTTTGACTGGGAGGAAGCCTGTGGATCACACCATGCCCAAGGGGCAGCAGAGCTTGGTTACCTGGGCCACTCCAAGGTTAAGCGAGGACAAGGTTAAGCAGTGCGTGGATCCCAAGCTGAACGACGAGTACCCACCAAAGGCAGTGGCCAAGCTCGCGGCGGTGGCGGCGCTGTGCGTCCAGTACGAGGCTGATTTCAGGCCCAACATGACGATCGTCGTCAAGGCTCTGCAGCCTCTCATCAGTGCTCGTCCAGGAGATCATTAG
More
|
||||||||||
| Protein seq | MWCCSGAEEELHGAPAANPAAPPPRAPGPPRGPNAPRAGGAPAKVLPIDVPAVALAELNRLTGNFGDRSLVGEGSYGRVYRATLSTGEAAAVKMFDNNGGSGQSEADFCAQLSVVSRLKCDHFTQLLGYCLELNNRIVLYEFATKGSLYDILHGKKGVKGAEPGPVLTWSQRARIAYGAARGLEYLHERAQPPIVHRDIRSSNVLVFDGHDAKIGDFNLTNQSPDSAARLHSTKVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNDEYPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQPLISARPGDH |
||||||||||
| Function | Probable protein kinase At2g41970 [UniProtKB/Swiss-Prot:P93749] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0013900 | OsLiXu_Ung0013900.01 | ChrUN-Ctg104 | 46285 | 48513 | - | NAM | ||
| CDS seq | ATGTGGTGTTGCAGCGGCGCCGAGGAGGAGCTCCACGGCGCGCCGGCCGCCAACCCGGCGGCGCCGCCACCGCGAGCACCAGGGCCGCCGAGAGGGCCGAACGCGCCGAGAGCCGGCGGCGCGCCGGCGAAGGTGCTGCCGATCGACGTCCCGGCCGTGGCGCTGGCGGAGCTCAACCGTCTCACCGGCAACTTCGGCGACAGGTCGCTGGTCGGGGAGGGATCCTATGGCCGCGTGTACCGCGCCACGCTGAGCACCGGCGAGGCCGCCGCCGTCAAGATGTTCGACAACAACGGCGGCTCCGGCCAGTCAGAAGCCGACTTCTGCGCGCAGCTGTCCGTGGTGTCCAGGCTCAAGTGCGACCACTTCACCCAGCTGCTGGGCTACTGCCTGGAGCTCAACAACCGCATCGTGCTCTACGAGTTCGCCACCAAAGGCTCCCTCTACGACATCCTCCACGGGAAGAAGGGGGTGAAGGGGGCGGAGCCCGGGCCGGTGTTGACGTGGAGCCAGCGAGCACGGATCGCGTACGGCGCGGCGAGGGGACTGGAGTACCTGCACGAGCGCGCTCAGCCACCGATCGTCCACCGCGACATCCGCTCCAGCAACGTGCTCGTCTTCGACGGCCACGACGCCAAGATCGGCGACTTCAACCTCACCAACCAGTCGCCGGACTCCGCCGCCCGCCTCCACTCCACCAAGGTGCTCGGCACCTTCGGCTACCACGCGCCAGAGTATGCAATGACGGGACAATTGACCCAGAAGAGCGATGTTTACAGCTTCGGTGTTGTCCTTCTTGAGCTTTTGACTGGGAGGAAGCCTGTGGATCACACCATGCCCAAGGGGCAGCAGAGCTTGGTTACCTGGGCCACTCCAAGGTTAAGCGAGGACAAGGTTAAGCAGTGCGTGGATCCCAAGCTGAACGACGAGTACCCACCAAAGGCAGTGGCCAAGCTCGCGGCGGTGGCGGCGCTGTGCGTCCAGTACGAGGCTGATTTCAGGCCCAACATGACGATCGTCGTCAAGGCTCTGCAGCCTCTCATCAGTGCTCGTCCAGGAGATCATTAG
More
|
|||||||
| Protein seq | MWCCSGAEEELHGAPAANPAAPPPRAPGPPRGPNAPRAGGAPAKVLPIDVPAVALAELNRLTGNFGDRSLVGEGSYGRVYRATLSTGEAAAVKMFDNNGGSGQSEADFCAQLSVVSRLKCDHFTQLLGYCLELNNRIVLYEFATKGSLYDILHGKKGVKGAEPGPVLTWSQRARIAYGAARGLEYLHERAQPPIVHRDIRSSNVLVFDGHDAKIGDFNLTNQSPDSAARLHSTKVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNDEYPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQPLISARPGDH
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0719850 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g51040 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0719850 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0032710 | SBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0032420 | SBH | 0.0 | 1.006936 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0032480 | SBH | 0.0 | 1.965042 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0032580 | SBH | 0.0 | 0.101271 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0032300 | SBH | 0.000000 | 5.912832 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0500900 | SBH | 0 | 0.064195 | 0.017085 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0031940 | SBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0500500 | SBH | 0 | 0.047258 | 0.0044745 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0032360 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0032390 | SBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0032380 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0032160 | RBH | 0.0 | 0.246833 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0032180 | SBH | 0.0 | 2.588156 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G032130 | SBH | 0.0 | 2.495634 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0031980 | SBH | 0.0 | 0.0 | 0.0 |
