Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLiXu_Ung0009410 OGI:99020040 | 1/16 LIU XU | Os125827RS1 | Gramene(+IsoSeq) ChrUN-Ctg83:16609-23655
Gene Symbol TPR46, OsTPR046, TPR046, OsTPR46
DNA seq

CTAGCCAAAGCTATCATCATAAGCCATATTGCCATAATGCGACCAAAATAGGCAGAAAGGATACCGAAATGCATCCTCAATCTCAGAGTTCCCTGGATCCAACTTGAATCCATTGTAAAGTGCTTCGCAAGCACTCTCATAGTCCTGTTGATAGAATACCAAGTAAATAATATCAAAGAAAAATTTGCAGAAAAAACAAAAACATGGCTAACAGCATCGTCTATATGTTAACCTTCAGTAACATCAGAGCAGCACCCAGCTGGTAGTAGGCCTTTGGCCAGTCAGATCGCAACTTCCTACATTCATGAGCATCCAGCAAAGCCTTGCCTCCATCACCCATGCGATGCCAGCAAAGGCTCCTATTTGAGAACAAGGTAGCATCATCAGGGTAAAGGTACAGTGCCTACATTGAACAAGGAAAACATGGGTTAGCAGATTTACTGAGAACATAAGAACAGCTATGAATTTGCAATCGATAAACAAGAAATTTGCACATTAACACAACCACACTAGTATAAAAGAACTGGTTGAGTCAGCTAGACAACTAAAACTAGAAATGAGAGTATGGGAAACAATGGTACGGTACTGTAACACTTACAAAATATGTGGAATTTAAAATCATACCACTTTTGGATCAACAAATCCTGTTCACTAGTTTTTAATCCTCCTTGAAAATATGGAGTTTTAAGCCTTTTTTGTAAGTTCGATCTAGTTTCTCTATGTTTAAGCCAAGTCAAGCAACTCCACAAAAGCTCTACTGTAGTTTTAATGTTGGATAGGAGTGACAGCAAGAACACTGAGAATCTCCTAAAACAATTGCACTACTCTCATTAGTACATATTCTCTTTCTGTTATGATAAAACAGGTACACCTCAGGAGAGTATATAAAAATATCAATATTGTTTCTACATGAGGAAATGCACCACATAAAAGAGCAAATAAAGATAGCTAGGACCTTGGCGCACTATGGGCACAAGCACCAAGTTTTTGCTACTTCCCCCTGCAGTGGCATTGCCAAAATTGGCAAAATTCTGGGGATACAAACAAAATAGCTCCTATGGACATTGAAAGGAAATGATGTTGCCAATATATTGCAGAAATGATGTGGTTTTTGAAAGGAAATACATATCTTCTCCTTTGCAGGTTATCTTTTTTATTACACATTGGCTCCGCTCATGGGCTATCCTCCAGAAGGTCAATTTGCGGGGTACTATCATTGCAGCTTGTCAACAATTGGAGCTAGTGGCCCTGGAGTTTTCTACCCCGGCACATGGGTGGCATTCTAGGCTACGGTTAGAGGGCTCCTGAAGTTCCTTTTGTTCCTGCTATTTTGGATGATGAGTTTATCTTTTGTTTCTTTCTTGTTGGCTGTATGCACTGTTTGGGTGCAGAAGCCGGAGGTGCTCTCAGAATAATTGTATGAAATTTACTGAGATTAATAAAGCTTCCATTATCTAAAAAAATGGACATTGATATATATTTTTTTGCCCAGCTCCAGTCAAACTTTGTACAATGGAATAGCATTTTTCTACTAAAAGAATAGATGAACGAGTTTGCATTCAAGTATAAGCAAAGCCAGGTCGTAACCTTCATACACTGTATGCAGGGACAAATTCAAAATAGAGATAAACAAAATGAGGAAACATGGTGCTCTGATGTACCTTACTGTAGAATCCTGTTGCAGATAGATAATCCTTTTTTTCGACAGCCTTATTACCCAGTGACTTTAAATCTGTTGCTTTCCTTTTATTGACAGGCTCACCCTAAACCACCAGTTATATCAAAGGATGAAGACTTGTGTTATGCAGGAAAAGTCCTAACAACAAGCAGCCAGGTATATTTATGCATTGGAGATTCAGGAAAGTTGAATTTAAGCATGTAACATCTTCAGTCATCATTTATATGATTCCACATGCCAATGTTTCAGTGATAGTATCCTAATTTCCATGCTCAGTCTCGTAATAGTGACAACTTACTGCCTAAATTTTAACTAGTAATGATATCCTAATTCCTACAGCAACTACAGTATAACACATTTTACTCAGACCTCATCAGCCACTGAGCCACACTCATAATGGGAAAGATGGTCGTTCTTTCATTAACTAATGAGACTGTTTCCTCCTACATTTTTTTACCTCCTATACATTTGTACTGCACTTCAATGCATCCCTTAATCTGGATCCAGATAATCTTTAGGCTGTGTTCTAACTTCTAACTACAAGTTCCCAACTTCTACTCCCTCGTTTTCCTCACGCGCGCTTCCCAAACTGCTAGACGGTGCTTTTTTTTTTTACAAAAAGAAAATTTATAGGAAAGTTGCTTTAAAAAATCATACTAATATATTTTTAAGTTTTTTAGCTAATACTTAATTAATCATGCGCTAATGAGTCGCTTCGTTTTGCATGCAAGGGGGGAAGTTTCCAACCCTTTCTACCGAACACACCCTTAGACGGTTCTCAATCATCGGTAACTAAGTCTTGTGCACAATTGGGATAATGAATTGACGTGGTATTCCTTAATGACGTTCAAATCATCTAATGCAAGTTTATCTTTCAATCACAATGGGTTGTTCCCAAAATAATTAACAAGCACAATTTATAGATAAAAATATCATATAAAACTTGTTTTGAGAAACAATGATTGACCATTGCTGCAAGAAAATGACTAATTCATACATTCACATTCAATTCTTAGGAAGATAAGACAACTTCTATAATTCTTTTCAATTATTTTAACAGAATTTCAGCACATATGCTCCCTCCTGTCAAAGAAAGTACCACTGTAGAATATCTGCAGTCCAACGGGCAAACCATCTTTGACTAAACATATCCTCTAGAGTATGTAGGCTGCACAAATAACATTTTGGATATGTTTGTGGGTAAGAGATAAACATATTCGGAATGAAAGGTTTTGACTAAAATTTTTTCTTCTTATATTATACTAGTACAAATGATGAAATATATTAATTTGCAAGATGAACTCAATGACATTATTCTCTAGTGTCAAGTTGCATCTTTTTGACTTTTCAAGAGGTCATGCACACATGATTTCATGCACTGAGCAGGACACTAATCATGAGTGCATTTTCTTCAATATTAAATCCTTTTAATATAAAAATTCTCGATGAAGCTTAACAAATGGAGTATATAAAAAAAAAAAAACTTATTTTTTGGTGGGTTTCCATCTCTCTGCCTCTCAAAATAGAAATTGTCTCTATTACTTTTGCTATACCAAGCTGGACAATTTGTGCCAAGCAAACTGTCAAAGTTGTAACTATCCAGAGTTCTTCAAAAATAACAGCTTGCAGGCATAAAAACTATATATAATTAAATATGGGAAGACCATTCCAAATATGCACTGGCAATTTAACAAAATGAATAGTACAGAGTCCCTATAAGAAAGAGAACAAAACTATTTGAATCCATGGAACCATTAGCAGAGCATAAACTCAGGTACAGAGCAACTTTGCAGTGTAGATTAGGGATTTCAGAGGAATGCATTTACAGCATTCATAATAGTAATGAATAACGGAGCAACTCCAGAACTTTGTTGAATTGGAAGGGAATAATCAACAAGCAATGATTAGCCACGAACATGTCTTTAACCTTGAACAAGTTCAGTGTTTAGTTACCAACAGAATTCCAATCAATGTAAAAACTGCAATGATTAAAGTGCATGTTTGTAGTGCAAAGAGGTAAATCTTACATTATCAGAAATGTTACAGTTGGCACCAGTCTCTTCCATTAAGTAATTGAAGCACTCTGTAGAACCACTGTTTTCAGCAGTTAACATGCGATCTTCACTGACAACAGCACCAACCTATCATATAAAATAAGTTTTACCATATGTCCTCAAGATGACTAGGTATCATTTCATAATTTTTGAAGTTTCATAAATGAATTAACAGCTTTATGCCACCACCTCTGTGTCAGCTGTCTATTGAGCTGTTGTTTTTATCCTACATATGGCAGGCAACCTAATCACAAATTCACAAGTAGGTTTTTTTAAAAGGGAAAAAAGTTTCAATCATAAGTGGATCATGGGCTACAAAATTGTGTAGTTGGTGTAGTTTTTAACAAGCCATATACAGACAAAATATGTTGAATTACTGAATGGAGCATGGAGAAAATGTCAAAACTTGCAAAGAAGCAAACAACCTGAACATGATTGTAAGGATTGACAAAATAAATAAAGGTAGAGCACCTTAATCAGGAGATTTATGCATTTTAATTCACCAGAATCCATAGCAGTATCAAGAGGTGTCAGACCATCTACCATCTTGTTAAACTGGTGAGAAACATTAGGCATATTAGTTCATATGGTACATGATACAACAGGGACAGAAGACAAACAATGGACGAAAAGATAAAACTTATAGAACCGCGATACTGCATCAAACGTGCAGTGAAAACGAATAGCTTCTATTGCATAAAAATATAATGAGAAAGTTGAGTTTGAAGCAAACATGGAACAAGCTAGTCTTGAAGAATTGCGTACCTACTGGCTACTAGGGAGTAGGGACATAAGGTTATAAGTAAGTAATGAACATTCAAGAGTTTAGTTATGCCACATAATGCAAAGTTTGTTAGCAATACTCAATACTGAGCATGAAGTGTTAATGATTTCAACTATGAAAATAAATAAAGTATCAAGCAACCCAAATACAATCAATAAAATAAAACATGACAAAAAGGAATTGACAAACAAAAGTTGGCGCAGAGAGCACACGATTGAAAGCATGCGTTTTAAGGCACAAATGGCACGCTGTAAAACTTACATCTGCATTGTGGTCCAATAAAATCTTCATAGCACCATCTCGCCCTTCAGTAGCAGCAACATGAAGTGGTGTCCCACAGTAAGCTACTGGGTCCACACAAGCTCCTTTTGCAAGTAATAGCTGTACCATTCCACATTCTCCTGAAAATAAACGAGAGAAGCCACTCATTAGAAGAGTTTTTGTTTTTGCTATAACATCTATGTTTCTCAAAAGCCAGTTGGACCTCCATTTTTCTTGAACATATTCCACAGAAGTTCCAGAAAATAGAAAATATTCCATAAGATGAAGATCTAACATTGGTCCGAGGAATTACAGAACTGATACTGTTGAAAAATGAAAATACTCAAGGTAATGTGTGGGCAACTAGGCATACATTTCAAGGGCTACTAGAAAGCCCTAAAAATACATAAAGAAAGTGACATAGAAAATGCATGTTCAGCAGTTCTTATCCATAGAAAATACACAATGAACTTTGTGTCCAAAGGAACTTTTAGAGGGCACCCACCTTCAATAAACACTGGCATGTTTAAGGAAATTCCAATGATAATTAAGAATATTATGACTATCAGATTTGATTAAAACTCAGTTTGTTATTAGCTGAAGCCCGAGGGAAAAATGTTGACGAGTGTAAATAGATCCTAGTAGGACAGCAAACCAGCACATAATTAATCTACTATAAGTTAAAAACAAAATAGGCAAGATTCAAGAAAAAGTGAAACCGGCAGATGAAAATAAGAGAAGAGTGTTTATAGAGGGGCACCTAAACAAATGGCGAAATGTATAGGGGTGAGGCCGTTATGGCTGGCTTTGTTTGCGTCGGCACCACGATCAAGAAGATACTCGACAGTGCTTACATGATTGAAGACTATTGCAATAATCAGAGGAGTCCTACCTGTCAAGCACAAAGAAAAGCTTATTGAAGCAAAGCACCTTCGTATACATTAAAGGAAACAATATTAGCTCCTATTTTTCTATAAAATATGCCTCCATAGAGTTAATGGTAGCAGCATTTTCTGTGAGCATAGCATCTAAAAGTTGCTTATCAAGACCTCGAGATAATAAAGTATGGAAAAAAAGAAGGAAATTTAAGTATCTTATCAAGTAGAATGTCTGGGCGCACGAGATAACATTTCACATCATGTTTTATATGAAGTGTAATGACCATGGGAGCATCACAGAATATGGAAAATGAAGCCATCCATTTTAAAAGCTAGGTAAAATTGATGCCTATTAACATTGTTTCACAGTGTCATGCATAATCTTATCAAGCACAAAACAGTTTGAGTAACACCTATGGTGAAGTAAACATTGAGACATATCGATCAACAAAACAAGTAACTCGAGTAAACATCATTAGATTGATCATTACAATATGGACATGCATGAAAATTCAAGACGCATTACAATATGGCCCACATCATTTACTTTTAGAAAAAGAAAAGAACATACTTCCTCCGGACCAAAATATAGCTATTTCTATCACGGTACCTTGTCCCAAAATGAAGCTATTTTTTCCAACGACCCTCTCCTCTAAACCAATCACAACCACTCTCCATTTAATCTTCAGCTACTTTCTATTGTTAACCAATCACAACCTTCCTCAAATCACACATTTTTGAGACGGAGGTAGTAGTAGATTTTAGTTTTTTCTTCCTATGCAACCGCAAAGGATTAAGGATTAATAAGAACTAAAATATGTGCACGTGATCATCCATAGCTACGAGGAAATGAGTAGAGTTCTGTATCGGGTGAGAGATGGACCTTCCTGGTCAGTGTCATCCACGTCCAGCCGCAGCTCCTCGACGAGGTAGCGGCACACCTCCAGCCTCCCTTTGCTGGCGGCGATGTGCAGCGCCCCCATCCCGTCCAACGGCCCCGTCCCCCGCAGCCTCGCCGCCTGCACCGCCTCCCCGAGCCGCCCCCTCCCTTCAACCAGCAGCATCGCCATCCCTGCAACGGCTCGGGAGTCGGGAGGCAAAAAATTCAGCACACACCCGGAGCACCCCAAAAAGACGAACAAAATCGATCGCGACCGGAATCGAGGCGCAGCGTGCGTGCGTGGCGTACCCCTGACGAGGTCGAGGTCGCCGTTGTGAGCCGCCTCGAAGAGCATGTGCTGCATCCATCCACCGGCTGCACGGGGCGAGGAGGAGCGGAGTTAGCAGAGAGCTTGGCGAGCTAGGGTTTTGGTTGCAGGGACATGGAGGGAGGGAGAGGGGGTTGGGGAGGCGCTTACCGTACATGGCTCCGTTGAAGAAAGCTGACGCCAT

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CDS seq

ATGGCGTCAGCTTTCTTCAACGGAGCCATGTACGCCGGTGGATGGATGCAGCACATGCTCTTCGAGGCGGCTCACAACGGCGACCTCGACCTCGTCAGGGGGATGGCGATGCTGCTGGTTGAAGGGAGGGGGCGGCTCGGGGAGGCGGTGCAGGCGGCGAGGCTGCGGGGGACGGGGCCGTTGGACGGGATGGGGGCGCTGCACATCGCCGCCAGCAAAGGGAGGCTGGAGGTGTGCCGCTACCTCGTCGAGGAGCTGCGGCTGGACGTGGATGACACTGACCAGGAAGGTAGGACTCCTCTGATTATTGCAATAGTCTTCAATCATGTAAGCACTGTCGAGTATCTTCTTGATCGTGGTGCCGACGCAAACAAAGCCAGCCATAACGGCCTCACCCCTATACATTTCGCCATTTGTTTAGGAGAATGTGGAATGGTACAGCTATTACTTGCAAAAGGAGCTTGTGTGGACCCAGTAGCTTACTGTGGGACACCACTTCATGTTGCTGCTACTGAAGGGCGAGATGGTGCTATGAAGATTTTATTGGACCACAATGCAGATTTTAACAAGATGGTAGATGGTCTGACACCTCTTGATACTGCTATGGATTCTGGTGAATTAAAATGCATAAATCTCCTGATTAAGGTTGGTGCTGTTGTCAGTGAAGATCGCATGTTAACTGCTGAAAACAGTGGTTCTACAGAGTGCTTCAATTACTTAATGGAAGAGACTGGTGCCAACTGTAACATTTCTGATAATGGTGAGCCTGTCAATAAAAGGAAAGCAACAGATTTAAAGTCACTGGGTAATAAGGCTGTCGAAAAAAAGGATTATCTATCTGCAACAGGATTCTACAGTAAGGCACTGTACCTTTACCCTGATGATGCTACCTTGTTCTCAAATAGGAGCCTTTGCTGGCATCGCATGGGTGATGGAGGCAAGGCTTTGCTGGATGCTCATGAATGTAGGAAGTTGCGATCTGACTGGCCAAAGGCCTACTACCAGCTGGGTGCTGCTCTGATGTTACTGAAGGACTATGAGAGTGCTTGCGAAGCACTTTACAATGGATTCAAGTTGGATCCAGGGAACTCTGAGATTGAGGATGCATTTCGGTATCCTTTCTGCCTATTTTGGTCGCATTATGGCAATATGGCTTATGATGATAGCTTTGGCTAG

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Protein seq

MASAFFNGAMYAGGWMQHMLFEAAHNGDLDLVRGMAMLLVEGRGRLGEAVQAARLRGTGPLDGMGALHIAASKGRLEVCRYLVEELRLDVDDTDQEGRTPLIIAIVFNHVSTVEYLLDRGADANKASHNGLTPIHFAICLGECGMVQLLLAKGACVDPVAYCGTPLHVAATEGRDGAMKILLDHNADFNKMVDGLTPLDTAMDSGELKCINLLIKVGAVVSEDRMLTAENSGSTECFNYLMEETGANCNISDNGEPVNKRKATDLKSLGNKAVEKKDYLSATGFYSKALYLYPDDATLFSNRSLCWHRMGDGGKALLDAHECRKLRSDWPKAYYQLGAALMLLKDYESACEALYNGFKLDPGNSEIEDAFRYPFCLFWSHYGNMAYDDSFG

Function Protein TANC2 [UniProtKB/Swiss-Prot:Q9HCD6]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLiXu_Ung0009410 OsLiXu_Ung0009410.01 ChrUN-Ctg83 16609 23655 - NAM
CDS seq

ATGGCGTCAGCTTTCTTCAACGGAGCCATGTACGCCGGTGGATGGATGCAGCACATGCTCTTCGAGGCGGCTCACAACGGCGACCTCGACCTCGTCAGGGGGATGGCGATGCTGCTGGTTGAAGGGAGGGGGCGGCTCGGGGAGGCGGTGCAGGCGGCGAGGCTGCGGGGGACGGGGCCGTTGGACGGGATGGGGGCGCTGCACATCGCCGCCAGCAAAGGGAGGCTGGAGGTGTGCCGCTACCTCGTCGAGGAGCTGCGGCTGGACGTGGATGACACTGACCAGGAAGGTAGGACTCCTCTGATTATTGCAATAGTCTTCAATCATGTAAGCACTGTCGAGTATCTTCTTGATCGTGGTGCCGACGCAAACAAAGCCAGCCATAACGGCCTCACCCCTATACATTTCGCCATTTGTTTAGGAGAATGTGGAATGGTACAGCTATTACTTGCAAAAGGAGCTTGTGTGGACCCAGTAGCTTACTGTGGGACACCACTTCATGTTGCTGCTACTGAAGGGCGAGATGGTGCTATGAAGATTTTATTGGACCACAATGCAGATTTTAACAAGATGGTAGATGGTCTGACACCTCTTGATACTGCTATGGATTCTGGTGAATTAAAATGCATAAATCTCCTGATTAAGGTTGGTGCTGTTGTCAGTGAAGATCGCATGTTAACTGCTGAAAACAGTGGTTCTACAGAGTGCTTCAATTACTTAATGGAAGAGACTGGTGCCAACTGTAACATTTCTGATAATGGTGAGCCTGTCAATAAAAGGAAAGCAACAGATTTAAAGTCACTGGGTAATAAGGCTGTCGAAAAAAAGGATTATCTATCTGCAACAGGATTCTACAGTAAGGCACTGTACCTTTACCCTGATGATGCTACCTTGTTCTCAAATAGGAGCCTTTGCTGGCATCGCATGGGTGATGGAGGCAAGGCTTTGCTGGATGCTCATGAATGTAGGAAGTTGCGATCTGACTGGCCAAAGGCCTACTACCAGCTGGGTGCTGCTCTGATGTTACTGAAGGACTATGAGAGTGCTTGCGAAGCACTTTACAATGGATTCAAGTTGGATCCAGGGAACTCTGAGATTGAGGATGCATTTCGGTATCCTTTCTGCCTATTTTGGTCGCATTATGGCAATATGGCTTATGATGATAGCTTTGGCTAG

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Protein seq

MASAFFNGAMYAGGWMQHMLFEAAHNGDLDLVRGMAMLLVEGRGRLGEAVQAARLRGTGPLDGMGALHIAASKGRLEVCRYLVEELRLDVDDTDQEGRTPLIIAIVFNHVSTVEYLLDRGADANKASHNGLTPIHFAICLGECGMVQLLLAKGACVDPVAYCGTPLHVAATEGRDGAMKILLDHNADFNKMVDGLTPLDTAMDSGELKCINLLIKVGAVVSEDRMLTAENSGSTECFNYLMEETGANCNISDNGEPVNKRKATDLKSLGNKAVEKKDYLSATGFYSKALYLYPDDATLFSNRSLCWHRMGDGGKALLDAHECRKLRSDWPKAYYQLGAALMLLKDYESACEALYNGFKLDPGNSEIEDAFRYPFCLFWSHYGNMAYDDSFG

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.000000

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0494000 SBH 0.0 0.0 0.370158
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g29190 SBH 0.0 0.0 0.169688
Nipponbare | IRGSP 1.0 | RAP-db Os02g0494000 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0017720 SBH 0.0 0.0 0.539293
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0017860 SBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0017760 SBH 0.0 0.0 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0017660 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0017570 SBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0287000 SBH 0.014531 0.0250345 3.3326985
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0017350 SBH 0.0 0.0 0.000000
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0308300 SBH 0 0.114396 2.2515475
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0017850 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0017440 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0018000 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0017760 RBH 0.0 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0017480 SBH 0.000000 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G017930 SBH 0.0 0.0 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0017670 SBH 0.0 0.0 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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