Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_12g0012810 | OGI:12048090 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr12:17105692-17114939 | ||||||||
| Gene Symbol | ST01 | ||||||||||
| DNA seq | aaggaaaccacttatttattacttcaaaaaaggaagacaatggttatctaaggaaaacatagtttatataggagactatcattcatatcgaataccatcgataaagattaaattgaagtatgaaggcaccgatatatGgctaacacaaacacacttccatatgccacagtttctttttcggaagcattcatgccatagttgataattagcattaataatAGagatagcataacgaaacaacaaacTCTtgaacatgactacgcaataatttgcatcgctcaatcctgcggcctcatactctgtctcccAagaacaaaaaagtttgctatgccacgatGataaaccaccattctccatacgagtacacatgtagtggtccagaagtcctatagttagtcagaacacaagcagtgagAaatcataggttacaagaaaatggacataagctgcatgaattaggaattaagagcagtaaatcagtaccagtgcggctttgcacataaaaaaaTaaacTttgatgcagataaacaggggggaattagtgactcgcagagttgcagtatccaaatggagtaacatttaacctgcatgagatgaaaagttagcaaggattgttagtatgttacccacagtccacagagagagagagcgaaagagcatatatgcaggagcattacatgatttgttactatgcaaggtagctgcagaactgttcatcgtcctcaagcagccTtacgttcttgaacttcaacagaaaccgaacagcaggaacatcaaagtccaacagAaacccagccatgataagctcagcgagagcaggaacttggtctgttctctcaaacaacaacccttttgatatctcctcagcAaaatatgctgcacactgtaccctctccgcattctccagtgacgccgacccgaaattcctagtcatgaaaattctggattcctCcctttcccagcggaaaatccgtgcagatttaacgttcaagcttcttcctgaagaaagccctacctgatagctcactgtgagaggcatagctgtctcatagacaaccacattggtgaggcatgataccatttcatgcctcTtttcagcaggaaagtcgagagcaggatctgcaagaaatgctagtatgatcctgagcaagccaggtttgatcacggttcctttctgaaccatggttagcgaatgatcgagcttcaagtcctcagattcatcccgcgtaacaaccttGgatattttctggacaccaacagtgctataaatctcatttagttttgctggagataagagagacaagctagctggtggataccatacaaataaaggttgctcagcctgcatcctgaacaaatcctccagcagcagatcatctggaatgaacacatcctgcttcggaagtagcaagatccgatcttctgagcagacaggaacttttgtgatggatccagcaaggtacttgccaatttctgtgttccaattcttatcaacaaattcAaagaaagcagcacaatcttttggtgtcggagtggatttggagttctgccacatgatccagagcctgcagtagtcgccaatcgttggatgacccttcacaccAaaaacagttttgaaaaacctaagtagcttgtagtcgtaccatgttaccaaaacatggagctgagagccaaagaggctatttctgtcatAaagaacacaacgatctGggctcacccactgtccattatcacttccctgtggtacccaaatccaattatcgttagcattgcgaggcttccaacgtaatgcctccaaatatgagtatatcctggAaattgcatcgccattagagcaactctttaagcactgcgccatcagcgcacagccagccctagcatccacaataactcctaatgtgtgcagctcactctcatatgacaatatctcctgcccataaaacacttcatctacgaaggggccatcatccctgtgaagagaagagcaggcaggaCcaaacaggagacaattcttgggatgcctatatcctgcagtcgtcttcAcccaCctcaggttgattgagctcatgaaattgtcaggtaaagctgagccaagcattttccagctcctgatgcacttcagcaatgatataacagcttctggtgtaatagctgaagcatcatgaggaattttgagtccagagatgacaaagggtgctccatgttttagttcagccttggcacccaaggccattagttcatctctgtagatgctgataccTttcccctggccatactcagaataataataatcatcaatgaagggtagattggaaattttagaaacaTgttcccattcagaaccaaaaataattgcttcctgaggagctctgaatccaagtgatgtatgcagccatctctcatacttcatgcaattggcaagatcaacaggtaactttccatgcttggtactaagTtctctgtagcattccagcatggcaactcccctctcctctgtaaacaaggaagaacataacagtttcgtgactctacaggcaattgccttacttgcctctataaagccAacgattacactaaccttccttaactctcctgcgtacaccctaatttcatctccatagaacttcaaatcaagcagcggtacatcatcaacAatattcagaagacatttccaatcatcattaacgaggAaagttccaggaggagctctgaagccaagacaagtcttcaaccatttcagctctttcagctttttagcaaaatgttgaggtatctcagcatatcgAAggcacTtgagcatcagtatggtgacatcaggagtaatttgatctctaatgagactgAagttgtcAactagcagctggtaATtCtgtttaaAGgcaacatgaactcccagtagctcaagctctggtttgtactcaagtatgtcctcaccataaaacagggtgtcaataaaaggcaatgagctgatgacagaagcattttcccatattctcggtcaggtttctgataaactgaagcattgcaaacatattgacccgagaaagagcaccgtttgatgattttgacataagatagttgacaatatgtacagatgcatctgcaaactcaaactgcactctaataccatgcagctcgtccttgtatgcgcttattttattttcatAaaattcttgatcaatgatggccacatcagaaaatacagatatgatctgccccaaatttcctgaatgtgcaggcaacaaaaaagatcgtgacggagaactgtacccaattgatgtcttcagccaacttccattcctaatatagctcctgatgttatgaggtagttggacacctatcgatcttagatccttgatccactgtaggagtAaaataacattttccatgctcaacggttggtcggcaatgtgtaaattagcatttgcgaactcaaactgcactccaattgctctcaactcttccacgtacccacgcagtttactcccatagaattcttcgtcaactatgggcacaccagaaaaaatgaattgaatctgtagcttgcttccccatcctacacttgatagAaaaaattctgatggcgacttgtaaccaacagaagtctttagccacttcccatttctgatacagctcaagaagttatgtggtagactgatattgcttgatcttatattcttaatccattgcagaagcaaaagtgcattctccctagctaaaggagatgaaacagaGgggaaactagcattgggaggatgcataaacggcacatccattgcttgtgcataagtccttaagaatgttatgagctgaccttcaggtgtaTaatttccggcataagttccagaagacatgtaatctgctgatagatcaatatacttttgagatctccaaggattcgttccaatcaaagtAaaccagttgctcccttcagcaggaacaagcaaagcatttttctgTtttatcacggatccacatttatctaccAaaggcattgcatgagacaggttgataatgctcccctcagtaatgtatttgtttgcatgtgagtgataaaggaagtggcagtaagcaatagcagaacttgccttataaatagtcttcgaagctgcaaaagcatattcatagaggttccgaatttccagcttcgcaattttctgaagccactcaataatctgtgttctcctgcaaaacgtgttaagagacttctgtgtattcaggggcagaaagaacatgttagaggtagttgagagttccttgctccagccaataatccatggtaagtcattaacattggatgctatacaaatcctcttatgatgcatgttagctccacttacactgcaatatgacggacaatcagctccagtcacatattttatgaGgggtacatccgacatgcttgtattaGaaaacttcaaccaccaattatcagcaataaaagataatatttcaagataaatatcttccggagcctgtgtcacaagatttgaaccatcaataaacttaccataccattcatggttgacatatccaactcccagaaatcctaatacatcattgtattccttgctatcaaGataggagttcaggacagaagtgccatgagaacataaattctgcagattaattccacgtttcttggccatgattagaaTtctccagaacgcaccatccagcctagcgacctcactgggtttgcagaaaaccttctgtgtatcAaaggactcgcaaggcattatatctttagttgcaaTattgttttttattgacaaccttactgaatcaaacacaggtatggaagAagttgctactggcAGaaacctAaaaattggaggaagggcaaatgatggggcattgcttgatgatttcAaaagagcttcaaatgcactgacaaaagcaTaaggtacgcaatcaagtataccacgattccattggctgtcaagcaggatggactcacgggatgaagcaagaAGgaaatcagcttgaataatgaagggcaaattagtaaccAtctcTgttggcaggaatgcAtagacaccaggtgaccgTgctcctctgcttagtcgttgtccatgaggaaatgctaaggtaatcacccatttatctacctccattcttttcttatctctgcactctggtttgaccacaaacttctgcttccacATatagtaGgtacactcCTctttatcaccccttttattttcttgcatagctagatggagaGTgtatgactctgcatttatatccttctgtgtcttatagtccacttcacttgagattgaaatctggctaagcttactggcctttggatcatcgtttatttccctgacagacagcTgcctaattttcgaaagaaacagaagaatttcaggatgcgtgcttgatagttcattcttcactgggagtatcttatcactcttcaggggtaagatgatagtggtcgtaggaagctttttagaatagccatataccgcatgtatgtcatcaatacttggcttctcatcaacccatttaggaacaatgtatccgatatcacaatcttctgagggttcTtcattaaattttatctgataCccattgctgAagatgtgtggttgactagataccagaaatacacttttaaatccaatacctgaatgaaaggtgattactttttcttagaaggacAaacaaccaaaaatgcaatattactatagtacaagatgttataaatgtagtcttaaataCcaatgggatagccttaaaaaaatcaatgttatttgctgcAaaagcaaaagtgttggttaccatgcaaattctaatgcttgattcagtgtataacaagttgtagggacatctttagaccatcgacaaggTatagatGactAgtaaattcaaatgtactattAacaccaggtagaggtaagcaaatctttttccagagtaaaaaGtgaaccaatattcatatagtcacagCaaaaataggaCcaaaaTattgatcctagcagtgatgtctttcttaatgataacgAactccagtgcaggttccacatctgatggatactcattatcctccgcattctaccaaaaaagtcagcacattagagaatgttgaatgtctagttgtatgctctctatcactaactaataaatgttacccctggtacagtttcaatatttcaacaggttataatgatcacataatgaagaagacataataatAAAaaaaaccgagatgtcttcaattatatgtgaattcagcttcaatatcgttaataattaaaaatcaagttcagaaattatattgctctaactagatcatgcccaggcaacaacagtaaagggcaactcctgatacattagcaaatctcgattacatggtgcttttggtacctctacatcctcacagtctcaTttttttacagagtccactgctgaatagtgtgatataagttggaaagttaaggtttagccaaagtaccagtgcgcttgaagatattacacaagtgaagaatgctgctagcctcagctgacaggtaaaataaagtactatccAaatgctagttgtaggaatcatacctcttaatttcgtccaagatggaattaattctctaaggtcaaagtgttctattttgagaattccaacccctcgtaactaaagTttagtgcgccacaacacaaactggcttttaaggaacaaatcacttcagcggcaatccgacgaacacctctagggcgtcattaggtggtgacagatttgcagggcacaagaccAaaaaaataataataatagaaaacgtgggtattcctcaaatcaagagaagcaggaGggatgccaggacaagagacatcggaaaacagtagatacgaggagaaaatcgaaccaggatgaactgcagctcctaaggatttcgcaggcgcgcgttgcggcctatcttgatgttgggggggaaaagagagagtagactaatttttgtggggggaattgaaggatcagaacggcgttaaggacgcaGgttgtctgcaacgtgtgcagtaccgcagaagatctGaatgggtttggcgatccatcagtttttcttttcttgttcagaacagagactgatctcatctcattgatcaaaaaaaaaaaaaaaaacagaacaggttgcgtgacctgccaacgattttcgagagtgtgcatgtattatactatttttcttttcttAaaaaaaattaatcAatagagcaccggcaatattttttataggatttgattaaTtattacttattaatAaatgttttccaataccaattttatgtcttttttttgcaggaagAaaTaatgcagtactcaatcAaaatatcctcagagactagcTttttttttttttgatcttctcacagactagctttgatataaagtttcaatctatgttagcaacaccaaagatcgcagtgcaaattgcaccaaatgctaactattattgatgttggcccacgAagagtttagttttataaattagtacaatcaaagagctatttGgagtttgttaacattggctaaggcatgcacgataagagaatctatcctatgtcactaagtttgtctcaattAaacgatttgatattaacTTtgttcttttataATatactagcgagttatctacttttctacaatgtgttattGggctaacTtttttttaaatacccaaattcccttatagacataacttcctccgtcccaaaatataaaaACttttagcccttaagatttgtcccAaaatataacaacttcttcaccaacattctcttcttaaccaatcacaaccttctaccatttacttttcccacctacctccactactcatccaatcacAaccctccaccactcacttctccctactttcttaataaccgtgtccaaatctaaaacttcttataTtctaggacagatggagtaaaTtttaacaattgatttatcttaacataagtttaGaaaaaaatgTtttttagcctcgttacagaaattgtgtaaaatttcaagatttttgcattctatttgaaaagtataatttatccattatatgctatctataatgttttctttctgttgttatttataacgcaaattatcTttcatatgctacacaaaatatttttgtgctattatcTtttgtgtaagcagtttccctAaaatatactcctccgtcccaaaataTaaaggattttggagggatgtggcacttcttagtataggatgtggcctgtccagattcatagttctagaaaatatcacgtcactccaaaatcccttatattataggatggagggagtaccacaagactaTtttttttagAaaaataaaaacacacaaaaaaaacttgcaaCaaacttccattttgtttgaggagtcatacatttaGttttcgccttttttttaagtgcttcgtactagcactctataagacgttgatgatgccgacggtgcttgcatgtttcaaatggAaaccggtcaaaattcaaagcactAaactttaatactttgatgtaGgacgaaagtagatttcctggcatattctgAatggttttcgagaaattcatcaaatttcaaacaataaattcagcaaaaaattgccgaaaaacaaTcatcccatcagggatcaagATgcagatcgtataggagagattatatcagttctgttttcccttcatgcatgcatgtatgaccatgagagAaaaacacagagaTtttcttattcaatcAaacatacgatatcgactcgcgcattaattaattaaTttttatctcagAaaggaataattaacaatgggattagcaccagggttcactctatcgttttcggactttgTttcGggggtcaccgaaattcagaaattttgagcaaaatttagttgaatttaaacaaatattacccaaattcatgaaaaaaTtTGAAAAATTTAAAAATTTCGGCCGAAGTAATATCGTATCGGAGATGACCGAAATGACCGGTCAGAAATTTCCAACCCTGATTAACACGCACGCACGCATGGATGAATATTCAGGTAAATCCTGCACTAGTACTATTTAAGTGATCAGATATACACCCACCTGGATGAGCTCCATGAGGAAATGGAGGTCCTTGGAGTAGAGCTCCTGGGAGAGGTAGGTGACCGCCTGGTGGATGTCCTCCGCCAGCGGGTTCCTCTCCTCTCGCCCGATGTAGAATCGCTCCCGCCGGATCCTCTCCACGTGCTCCCTCGCCGCCGCCGGCGAGGCCAT
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| CDS seq | ATGGCCTCGCCGGCGGCGGCGAGGGAGCACGTGGAGAGGATCCGGCGGGAGCGATTCTACATCGGGCGAGAGGAGAGGAACCCGCTGGCGGAGGACATCCACCAGGCGGTCACCTACCTCTCCCAGGAGCTCTACTCCAAGGACCTCCATTTCCTCATGGAGCTCATCCAGaatgcggaggataatgagtatccatcagatgtggaacctgcactggagtTcgttatcattaagaaagacatcactgctaggatcaatAttttgGtcctatttttGcttcaaccacacatctTcagcaatggGtatcagataaaatttaatgaAgaaccctcagaagattgtgatatcggatacattgttcctaaatgggttgatgagaagccaagtattgatgacatacatgcggtatatggctattctaaaaagcttcctacgaccactatcatcttacccctgaagagtgataagatactcccagtgaagaatgaactatcaagcacgcatcctgaaattcttctgtttctttcgaaaattaggcAgctgtctgtcagggaaataaacgatgatccaaaggccagtaagcttagccagatttcaatctcaagtgaagtggactataagacacagaaggatataaatgcagagtcatacACtctccatctagctatgcaagaaaataaaaggggtgataaagAGgagtgtacCtactatATgtggaagcagaagtttgtggtcaaaccagagtgcagagataagaaaagaatggaggtagataaatgggtgattaccttagcatttcctcatggacaacgactaagcagaggagcAcggtcacctggtgtctaTgcattcctgccaacAgagaTggttactaatttgcccttcattattcaagctgatttcCTtcttgcttcatcccgtgagtccatcctgcttgacagccaatggaatcgtggtatacttgattgcgtaccttAtgcttttgtcagtgcatttgaagctctttTgaaatcatcaagcaatgccccatcatttgcccttcctccaattttTaggtttCTgccagtagcaactTcttccatacctgtgtttgattcagtaaggttgtcaataaaaaacaatAttgcaactaaagatataatgccttgcgagtccttTgatacacagaaggttttctgcaaacccagtgaggtcgctaggctggatggtgcgttctggagaAttctaatcatggccaagaaacgtggaattaatctgcagaatttatgttctcatggcacttctgtcctgaactcctatCttgatagcaaggaatacaatgatgtattaggatttctgggagttggatatgtcaaccatgaatggtatggtaagtttattgatggttcaaatcttgtgacacaggctccggaagatatttatcttgaaatattatcttttattgctgataattggtggttgaagttttCtaatacaagcatgtcggatgtacccCtcataaaatatgtgactggagctgattgtccgtcatattgcagtgtaagtggagctaacatgcatcataagaggatttgtatagcatccaatgttaatgacttaccatggattattggctggagcaaggaactctcaactacctctaacatgttctttctgcccctgaatacacagaagtctcttaacacgttttgcaggagaacacagattattgagtggcttcagaaaattgcgaagctggaaattcggaacctctatgaatatgcttttgcagcttcgaagactatttataaggcaagttctgctattgcttactgccacttcctttatcactcacatgcaaacaaatacattactgaggggagcattatcaacctgtctcatgcaatgccttTggtagataaatgtggatccgtgataaaAcagaaaaatgctttgcttgttcctgctgaagggagcaactggttTactttgattggaacgaatccttggagatctcaaaagtatattgatctatcagcagattacatgtcttctggaacttatgccggaaattAtacacctgaaggtcagctcataacattcttaaggacttatgcacaagcaatggatgtgccgtttatgcatcctcccaatgctagtttcccCtctgtttcatctcctttagctagggagaatgcacttttgcttctgcaatggattaagaatataagatcaagcaatatcagtctaccacataacttcttgagctgtatcagaaatgggaagtggctaaagacttctgttggttacaagtcgccatcagaatttttTctatcaagtgtaggatggggaagcaagctacagattcaattcattttttctggtgtgcccatagttgacgaagaattctatgggagtaaactgcgtgggtacgtggaagagttgagagcaattggagtgcagtttgagttcgcaaatgctaatttacacattgccgaccaaccgttgagcatggaaaatgttatttTactcctacagtggatcaaggatctaagatcgataggtgtccaactacctcataacatcaggagctatattaggaatggaagttggctgaagacatcaattgggtacagttctccgtcacgatcttttttgttgcctgcacattcaggaaatttggggcagatcatatctgtattttctgatgtggccatcattgatcaagaatttTatgaaaataaaataagcgcatacaaggacgagctgcatggtattagagtgcagtttgagtttgcagatgcatctgtacatattgtcaactatcttatgtcaaaatcatcaaacggtgctctttctcgggtcaatatctcattgccttttattgacaccctgttttatggtgaggacatacttgagtacaaaccagagcttgagctactgggagttcatgttgcCTttaaacaGaATtaccagctgctagtTgacaactTcagtctcattagagatcaaattactcctgatgtcaccatactgatgctcaAgtgccTTcgatatgctgagatacctcaacattttgctaaaaagctgaaagagctgaaatggttgaagacttgtcttggcttcagagctcctcctggaacttTcctcgttaatgatgattggaaatgtcttctgaatatTgttgatgatgtaccgctgcttgatttgaagttctatggagatgaaattagggtgtacgcaggagagttaaggaaggttagtgtaatcgtTggctttatagaggcaaaggagaggggagttgccatgctggaatgctacagagaActtagtaccaagcatggaaagttacctgttgatcttgccaattgcatgaagtatgagagatggctgcatacatcacttggattcagagctcctcaggaagcaattatttttggttctgaatgggaacAtgtttctaaaatttccaatctacccttcattgatgattattattattctgagtatggccaggggaaAggtatcagcatctacagagatgaactaatggccttgggtgccaaggctgaactaaaacatggagcaccctttgtcatctctggactcaaaattcctcatgatgcttcagctattacaccagaagctgttatatcattgctgaagtgcatcaggagctggaaaatgcttggctcagctttacctgacaatttcatgagctcaatcaacctgagGtgggTgaagacgactgcaggatataggcatcccaagaattgtctcctgtttgGtcctgcctgctcttctcttcacagggatgatggccccttcgtagatgaagtgttttatgggcaggagatattgtcatatgagagtgagctgcacacattaggagttattgtggatgctagggctggctgtgcgctgatggcgcagtgcttaaagagttgctctaatggcgatgcaattTccaggatatactcatatttggaggcattacgttggaagcctcgcaatgctaacgataattggatttgggtaccacagggaagtgataatggacagtgggtgagccCagatcgttgtgttcttTatgacagaaatagcctctttggctctcagctccatgttttggtaacatggtacgactacaagctacttaggtttttcaaaactgttttTggtgtgaagggtcatccaacgattggcgactactgcaggctctggatcatgtggcagaactccaaatccactccgacaccaaaagattgtgctgctttcttTgaatttgttgataagaattggaacacagaaattggcaagtaccttgctggatccatcacaaaagttcctgtctgctcagaagatcggatcttgctacttccgaagcaggatgtgttcattccagatgatctgctgctggaggatttgttcaggatgcaggctgagcaacctttatttgtatggtatccaccagctagcttgtctctcttatctccagcaaaactaaatgagatttatagcactgttggtgtccagaaaatatcCaaggttgttacgcgggatgaatctgaggacttgaagctcgatcattcgctaaccatggttcagaaaggaaccgtgatcaaacctggcttgctcaggatcatactagcatttcttgcagatcctgctctcgactttcctgctgaaaAgaggcatgaaatggtatcatgcctcaccaatgtggttgtctatgagacagctatgcctctcacagtgagctatcaggtagggctttcttcaggaagaagcttgaacgttaaatctgcacggattttccgctgggaaaggGaggaatccagaattttcatgactaggaatttcgggtcggcgtcactggagaatgcggagagggtacagtgtgcagcatatttTgctgaggagatatcaaaagggttgttgtttgagagaacagaccaagttcctgctctcgctgagcttatcatggctgggttTctgttggactttgatgttcctgctgttcggtttctgttgaagttcaagaacgtaAggctgcttgaggacgatgaacagttctgcagctaccttgcatag
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| Protein seq | MASPAAAREHVERIRRERFYIGREERNPLAEDIHQAVTYLSQELYSKDLHFLMELIQNAEDNEYPSDVEPALEFVIIKKDITARINILVLFLLQPHIFSNGYQIKFNEEPSEDCDIGYIVPKWVDEKPSIDDIHAVYGYSKKLPTTTIILPLKSDKILPVKNELSSTHPEILLFLSKIRQLSVREINDDPKASKLSQISISSEVDYKTQKDINAESYTLHLAMQENKRGDKEECTYYMWKQKFVVKPECRDKKRMEVDKWVITLAFPHGQRLSRGARSPGVYAFLPTEMVTNLPFIIQADFLLASSRESILLDSQWNRGILDCVPYAFVSAFEALLKSSSNAPSFALPPIFRFLPVATSSIPVFDSVRLSIKNNIATKDIMPCESFDTQKVFCKPSEVARLDGAFWRILIMAKKRGINLQNLCSHGTSVLNSYLDSKEYNDVLGFLGVGYVNHEWYGKFIDGSNLVTQAPEDIYLEILSFIADNWWLKFSNTSMSDVPLIKYVTGADCPSYCSVSGANMHHKRICIASNVNDLPWIIGWSKELSTTSNMFFLPLNTQKSLNTFCRRTQIIEWLQKIAKLEIRNLYEYAFAASKTIYKASSAIAYCHFLYHSHANKYITEGSIINLSHAMPLVDKCGSVIKQKNALLVPAEGSNWFTLIGTNPWRSQKYIDLSADYMSSGTYAGNYTPEGQLITFLRTYAQAMDVPFMHPPNASFPSVSSPLARENALLLLQWIKNIRSSNISLPHNFLSCIRNGKWLKTSVGYKSPSEFFLSSVGWGSKLQIQFIFSGVPIVDEEFYGSKLRGYVEELRAIGVQFEFANANLHIADQPLSMENVILLLQWIKDLRSIGVQLPHNIRSYIRNGSWLKTSIGYSSPSRSFLLPAHSGNLGQIISVFSDVAIIDQEFYENKISAYKDELHGIRVQFEFADASVHIVNYLMSKSSNGALSRVNISLPFIDTLFYGEDILEYKPELELLGVHVAFKQNYQLLVDNFSLIRDQITPDVTILMLKCLRYAEIPQHFAKKLKELKWLKTCLGFRAPPGTFLVNDDWKCLLNIVDDVPLLDLKFYGDEIRVYAGELRKVSVIVGFIEAKERGVAMLECYRELSTKHGKLPVDLANCMKYERWLHTSLGFRAPQEAIIFGSEWEHVSKISNLPFIDDYYYSEYGQGKGISIYRDELMALGAKAELKHGAPFVISGLKIPHDASAITPEAVISLLKCIRSWKMLGSALPDNFMSSINLRWVKTTAGYRHPKNCLLFGPACSSLHRDDGPFVDEVFYGQEILSYESELHTLGVIVDARAGCALMAQCLKSCSNGDAISRIYSYLEALRWKPRNANDNWIWVPQGSDNGQWVSPDRCVLYDRNSLFGSQLHVLVTWYDYKLLRFFKTVFGVKGHPTIGDYCRLWIMWQNSKSTPTPKDCAAFFEFVDKNWNTEIGKYLAGSITKVPVCSEDRILLLPKQDVFIPDDLLLEDLFRMQAEQPLFVWYPPASLSLLSPAKLNEIYSTVGVQKISKVVTRDESEDLKLDHSLTMVQKGTVIKPGLLRIILAFLADPALDFPAEKRHEMVSCLTNVVVYETAMPLTVSYQVGLSSGRSLNVKSARIFRWEREESRIFMTRNFGSASLENAERVQCAAYFAEEISKGLLFERTDQVPALAELIMAGFLLDFDVPAVRFLLKFKNVRLLEDDEQFCSYLA |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_12g0012810 | OsLiXu_12g0012810.01 | Chr12 | 17105692 | 17114939 | - | NAM | ||
| CDS seq | ATGGCCTCGCCGGCGGCGGCGAGGGAGCACGTGGAGAGGATCCGGCGGGAGCGATTCTACATCGGGCGAGAGGAGAGGAACCCGCTGGCGGAGGACATCCACCAGGCGGTCACCTACCTCTCCCAGGAGCTCTACTCCAAGGACCTCCATTTCCTCATGGAGCTCATCCAGaatgcggaggataatgagtatccatcagatgtggaacctgcactggagtTcgttatcattaagaaagacatcactgctaggatcaatAttttgGtcctatttttGcttcaaccacacatctTcagcaatggGtatcagataaaatttaatgaAgaaccctcagaagattgtgatatcggatacattgttcctaaatgggttgatgagaagccaagtattgatgacatacatgcggtatatggctattctaaaaagcttcctacgaccactatcatcttacccctgaagagtgataagatactcccagtgaagaatgaactatcaagcacgcatcctgaaattcttctgtttctttcgaaaattaggcAgctgtctgtcagggaaataaacgatgatccaaaggccagtaagcttagccagatttcaatctcaagtgaagtggactataagacacagaaggatataaatgcagagtcatacACtctccatctagctatgcaagaaaataaaaggggtgataaagAGgagtgtacCtactatATgtggaagcagaagtttgtggtcaaaccagagtgcagagataagaaaagaatggaggtagataaatgggtgattaccttagcatttcctcatggacaacgactaagcagaggagcAcggtcacctggtgtctaTgcattcctgccaacAgagaTggttactaatttgcccttcattattcaagctgatttcCTtcttgcttcatcccgtgagtccatcctgcttgacagccaatggaatcgtggtatacttgattgcgtaccttAtgcttttgtcagtgcatttgaagctctttTgaaatcatcaagcaatgccccatcatttgcccttcctccaattttTaggtttCTgccagtagcaactTcttccatacctgtgtttgattcagtaaggttgtcaataaaaaacaatAttgcaactaaagatataatgccttgcgagtccttTgatacacagaaggttttctgcaaacccagtgaggtcgctaggctggatggtgcgttctggagaAttctaatcatggccaagaaacgtggaattaatctgcagaatttatgttctcatggcacttctgtcctgaactcctatCttgatagcaaggaatacaatgatgtattaggatttctgggagttggatatgtcaaccatgaatggtatggtaagtttattgatggttcaaatcttgtgacacaggctccggaagatatttatcttgaaatattatcttttattgctgataattggtggttgaagttttCtaatacaagcatgtcggatgtacccCtcataaaatatgtgactggagctgattgtccgtcatattgcagtgtaagtggagctaacatgcatcataagaggatttgtatagcatccaatgttaatgacttaccatggattattggctggagcaaggaactctcaactacctctaacatgttctttctgcccctgaatacacagaagtctcttaacacgttttgcaggagaacacagattattgagtggcttcagaaaattgcgaagctggaaattcggaacctctatgaatatgcttttgcagcttcgaagactatttataaggcaagttctgctattgcttactgccacttcctttatcactcacatgcaaacaaatacattactgaggggagcattatcaacctgtctcatgcaatgccttTggtagataaatgtggatccgtgataaaAcagaaaaatgctttgcttgttcctgctgaagggagcaactggttTactttgattggaacgaatccttggagatctcaaaagtatattgatctatcagcagattacatgtcttctggaacttatgccggaaattAtacacctgaaggtcagctcataacattcttaaggacttatgcacaagcaatggatgtgccgtttatgcatcctcccaatgctagtttcccCtctgtttcatctcctttagctagggagaatgcacttttgcttctgcaatggattaagaatataagatcaagcaatatcagtctaccacataacttcttgagctgtatcagaaatgggaagtggctaaagacttctgttggttacaagtcgccatcagaatttttTctatcaagtgtaggatggggaagcaagctacagattcaattcattttttctggtgtgcccatagttgacgaagaattctatgggagtaaactgcgtgggtacgtggaagagttgagagcaattggagtgcagtttgagttcgcaaatgctaatttacacattgccgaccaaccgttgagcatggaaaatgttatttTactcctacagtggatcaaggatctaagatcgataggtgtccaactacctcataacatcaggagctatattaggaatggaagttggctgaagacatcaattgggtacagttctccgtcacgatcttttttgttgcctgcacattcaggaaatttggggcagatcatatctgtattttctgatgtggccatcattgatcaagaatttTatgaaaataaaataagcgcatacaaggacgagctgcatggtattagagtgcagtttgagtttgcagatgcatctgtacatattgtcaactatcttatgtcaaaatcatcaaacggtgctctttctcgggtcaatatctcattgccttttattgacaccctgttttatggtgaggacatacttgagtacaaaccagagcttgagctactgggagttcatgttgcCTttaaacaGaATtaccagctgctagtTgacaactTcagtctcattagagatcaaattactcctgatgtcaccatactgatgctcaAgtgccTTcgatatgctgagatacctcaacattttgctaaaaagctgaaagagctgaaatggttgaagacttgtcttggcttcagagctcctcctggaacttTcctcgttaatgatgattggaaatgtcttctgaatatTgttgatgatgtaccgctgcttgatttgaagttctatggagatgaaattagggtgtacgcaggagagttaaggaaggttagtgtaatcgtTggctttatagaggcaaaggagaggggagttgccatgctggaatgctacagagaActtagtaccaagcatggaaagttacctgttgatcttgccaattgcatgaagtatgagagatggctgcatacatcacttggattcagagctcctcaggaagcaattatttttggttctgaatgggaacAtgtttctaaaatttccaatctacccttcattgatgattattattattctgagtatggccaggggaaAggtatcagcatctacagagatgaactaatggccttgggtgccaaggctgaactaaaacatggagcaccctttgtcatctctggactcaaaattcctcatgatgcttcagctattacaccagaagctgttatatcattgctgaagtgcatcaggagctggaaaatgcttggctcagctttacctgacaatttcatgagctcaatcaacctgagGtgggTgaagacgactgcaggatataggcatcccaagaattgtctcctgtttgGtcctgcctgctcttctcttcacagggatgatggccccttcgtagatgaagtgttttatgggcaggagatattgtcatatgagagtgagctgcacacattaggagttattgtggatgctagggctggctgtgcgctgatggcgcagtgcttaaagagttgctctaatggcgatgcaattTccaggatatactcatatttggaggcattacgttggaagcctcgcaatgctaacgataattggatttgggtaccacagggaagtgataatggacagtgggtgagccCagatcgttgtgttcttTatgacagaaatagcctctttggctctcagctccatgttttggtaacatggtacgactacaagctacttaggtttttcaaaactgttttTggtgtgaagggtcatccaacgattggcgactactgcaggctctggatcatgtggcagaactccaaatccactccgacaccaaaagattgtgctgctttcttTgaatttgttgataagaattggaacacagaaattggcaagtaccttgctggatccatcacaaaagttcctgtctgctcagaagatcggatcttgctacttccgaagcaggatgtgttcattccagatgatctgctgctggaggatttgttcaggatgcaggctgagcaacctttatttgtatggtatccaccagctagcttgtctctcttatctccagcaaaactaaatgagatttatagcactgttggtgtccagaaaatatcCaaggttgttacgcgggatgaatctgaggacttgaagctcgatcattcgctaaccatggttcagaaaggaaccgtgatcaaacctggcttgctcaggatcatactagcatttcttgcagatcctgctctcgactttcctgctgaaaAgaggcatgaaatggtatcatgcctcaccaatgtggttgtctatgagacagctatgcctctcacagtgagctatcaggtagggctttcttcaggaagaagcttgaacgttaaatctgcacggattttccgctgggaaaggGaggaatccagaattttcatgactaggaatttcgggtcggcgtcactggagaatgcggagagggtacagtgtgcagcatatttTgctgaggagatatcaaaagggttgttgtttgagagaacagaccaagttcctgctctcgctgagcttatcatggctgggttTctgttggactttgatgttcctgctgttcggtttctgttgaagttcaagaacgtaAggctgcttgaggacgatgaacagttctgcagctaccttgcatag
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| Protein seq | MASPAAAREHVERIRRERFYIGREERNPLAEDIHQAVTYLSQELYSKDLHFLMELIQNAEDNEYPSDVEPALEFVIIKKDITARINILVLFLLQPHIFSNGYQIKFNEEPSEDCDIGYIVPKWVDEKPSIDDIHAVYGYSKKLPTTTIILPLKSDKILPVKNELSSTHPEILLFLSKIRQLSVREINDDPKASKLSQISISSEVDYKTQKDINAESYTLHLAMQENKRGDKEECTYYMWKQKFVVKPECRDKKRMEVDKWVITLAFPHGQRLSRGARSPGVYAFLPTEMVTNLPFIIQADFLLASSRESILLDSQWNRGILDCVPYAFVSAFEALLKSSSNAPSFALPPIFRFLPVATSSIPVFDSVRLSIKNNIATKDIMPCESFDTQKVFCKPSEVARLDGAFWRILIMAKKRGINLQNLCSHGTSVLNSYLDSKEYNDVLGFLGVGYVNHEWYGKFIDGSNLVTQAPEDIYLEILSFIADNWWLKFSNTSMSDVPLIKYVTGADCPSYCSVSGANMHHKRICIASNVNDLPWIIGWSKELSTTSNMFFLPLNTQKSLNTFCRRTQIIEWLQKIAKLEIRNLYEYAFAASKTIYKASSAIAYCHFLYHSHANKYITEGSIINLSHAMPLVDKCGSVIKQKNALLVPAEGSNWFTLIGTNPWRSQKYIDLSADYMSSGTYAGNYTPEGQLITFLRTYAQAMDVPFMHPPNASFPSVSSPLARENALLLLQWIKNIRSSNISLPHNFLSCIRNGKWLKTSVGYKSPSEFFLSSVGWGSKLQIQFIFSGVPIVDEEFYGSKLRGYVEELRAIGVQFEFANANLHIADQPLSMENVILLLQWIKDLRSIGVQLPHNIRSYIRNGSWLKTSIGYSSPSRSFLLPAHSGNLGQIISVFSDVAIIDQEFYENKISAYKDELHGIRVQFEFADASVHIVNYLMSKSSNGALSRVNISLPFIDTLFYGEDILEYKPELELLGVHVAFKQNYQLLVDNFSLIRDQITPDVTILMLKCLRYAEIPQHFAKKLKELKWLKTCLGFRAPPGTFLVNDDWKCLLNIVDDVPLLDLKFYGDEIRVYAGELRKVSVIVGFIEAKERGVAMLECYRELSTKHGKLPVDLANCMKYERWLHTSLGFRAPQEAIIFGSEWEHVSKISNLPFIDDYYYSEYGQGKGISIYRDELMALGAKAELKHGAPFVISGLKIPHDASAITPEAVISLLKCIRSWKMLGSALPDNFMSSINLRWVKTTAGYRHPKNCLLFGPACSSLHRDDGPFVDEVFYGQEILSYESELHTLGVIVDARAGCALMAQCLKSCSNGDAISRIYSYLEALRWKPRNANDNWIWVPQGSDNGQWVSPDRCVLYDRNSLFGSQLHVLVTWYDYKLLRFFKTVFGVKGHPTIGDYCRLWIMWQNSKSTPTPKDCAAFFEFVDKNWNTEIGKYLAGSITKVPVCSEDRILLLPKQDVFIPDDLLLEDLFRMQAEQPLFVWYPPASLSLLSPAKLNEIYSTVGVQKISKVVTRDESEDLKLDHSLTMVQKGTVIKPGLLRIILAFLADPALDFPAEKRHEMVSCLTNVVVYETAMPLTVSYQVGLSSGRSLNVKSARIFRWEREESRIFMTRNFGSASLENAERVQCAAYFAEEISKGLLFERTDQVPALAELIMAGFLLDFDVPAVRFLLKFKNVRLLEDDEQFCSYLA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.132346 | 0.0 | 0.321812 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0477700 | RBH | 0.452006 | 0.097384 | 0.996011 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g29350 | RBH | 0.217950 | 0.196629 | 0.186010 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0477700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0013090 | RBH | 0.159701 | 2.401143 | 1.748846 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0013220 | RBH | 0.081453 | 0.534082 | 1.518914 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0013130 | RBH | 0.281511 | 0.917556 | 3.275102 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0012890 | RBH | 0.076900 | 0.079363 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0012620 | RBH | 1.949128 | 0.574186 | 7.116458 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0242100 | RBH | 0.8321625 | 5.998228 | 3.162793 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0012810 | RBH | 0.070394 | 0.093659 | 0.814694 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0262500 | RBH | 2.263597 | 7.5460375 | 8.0212665 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0012680 | RBH | 0.083089 | 0.040040 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0013020 | RBH | 0.058993 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0012840 | RBH | 2.885864 | 2.112137 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0013050 | RBH | 0.096681 | 1.268553 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G012730 | RBH | 0.219181 | 0.741933 | 0.768812 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0012500 | RBH | 0.087170 | 2.643361 | 0.857579 |
