Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_12g0006720 | OGI:12015030 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr12:5436505-5446700 | ||||||||
| Gene Symbol | LRR-RLK2, OsLRR-RLK2, RIR1, LRR-RLK2, OsLRR-RLK2 | ||||||||||
| DNA seq | tggatcaatcatgcatatcaatgtgttgacccgttcttgatgcatatacaattgtgtgtcatctcctaccttacattaacaactaatctagcctgttgcagttcaatcagagcttctgaccttgcaaaaggatgagctgctaaaagcatttcagtggcagctcaagagagagaagagagagaaatagaaactgcccaaacatgggggtttctccatggattatcatcttcttgttgattgttcttgtgcaagcttttgtcgcttcggccgatacgaacgcacaggacagtaagtatagtttcagttcttcaaaagtatatgttactacagtgctaattttgctcagtttgctgttcatcttgtctatgcctgcagcttctggacttaacgggcttgcaggtagctggggcagcgcaccatcgaattgggctggcaacgatccatgtggagacaaatggattgggataatttgcaccgggaaccgggtcacatccatgttggtatcagaaccagaaatttgtatatgcccatggatatcacttctcattgtgttcttccttctttgatggtgttttacagaagactgtcaagtttcggactgtccgggacgctttccggggacattcagtccttatcagaattgcagtacctgtatgtatcttcttctctctgtagtttgagcactttagattgcaaatcaggcgtaaacatgtacaatagttggaaatttggaaatttatgcaaacttctgaaacgattcttttcttgttgcagggacttatcctacaacaagaacttgaatggcccccttccttcaaccattggaaccttgagcaagctccaaaacttgtgagactagttaaactttggagaatttcagtgcatggattcttgtttgacttgtgtcctctctcatttctctgcagaattcttgtcggctgcggctttacaggtgaaataccaaaggagataggccagctctcaaacctgatatttctgtaagaaactgttcagacctgattgctgattcttcactatgtccaaaatctaaggcctactatctcatttgcatgtcctaaactttatcttcttgaacacaagatgttttccctaagttttggattgaccttccaactgtcaagtactatggttgggtttttagacttttgcaatttatgttatactcactcctaatcgagtggtgtccttccatttaccaatagctgaattggtcagcgttttgtcatgcatgcttataatcttgtagtaagaatttaagaacttggtctgaacattcagaaagagaggggcgatgcagttaaacctatttcttttgggacaattcaagtatatttgttatggagaatgaacaaaaaaaatgttatcttgtttcattactagataatattgaattctcaggtctggtgtccttcatttcaataacacaaaggattaatggctcaaagtttttaaaatattgcaaacatggtctagttatgcacttgatatgtttgcagaaattccttaatgaaatctgcatcatttatatgttacttcgcaacttaaccagtagcaactttaatctttgttctatttttttttctcaaacacacaggagatctacgcatcattatattgttctgtgttattattgtataagcctttgacattgtaattgcttctcgtaatatttctacacataatttcagtataataatcctgataaaaaggattgctaattgtattccattcctccagatcattgaactccaacaagttcactggtagcataccgccatcgcttggcggcctctcaaagctatattggtttgatctggctgacaatcagctcactggaggacttccaatatccaatgcgacaagtcctggtctggacaatctcacaagtactaagcacttgtaagtacattactattttttttattgatgtcataagatttttgatcttctggtctgttttctgatgaatatgtatacacattttgtcgcagccattttgggataaaccagctctctggcagcatacctagccagattttcaactcaaatatgaagctgatacatctgtatgactaaccaaattattcatcctcacaattgtgtaaattattgttgtgaagctcagatctgaggctgatctcttacatctgtaattatccaggcttcttgacaacaacaaattctccggtagcatcccttctaccttaggccttcttaatacactggaagttctgtaagtacaagcacatattatggatgacaataaaattcagaggttgacactgctgccttttgccatgaaatttgttcgtcacaggcgtttcgataacaatgcgcagttgaccggaccggttcctaccaacctcaagaacctaaccaagcttgcagaattgtgagtttattatgtttgtctgcttttgtttagtatcattgtatcaattctaaaacattagtagctcactctcttttttcttttcatttgaaaatagccatctagcaaacagcaatcttactggtccattgccagacctaactggaatgagctcactcagctttgtgtaagtgatgagtcaaaccttccaatgtgaaaaacaagatttgacctgcaattataatactatgcaaatttctggactgtttcctcttctgacctgaaacattgttacagggacatgagcaacaacagcttcagtgcatctgatgcgccctcctggataaccactttgccatcgtcattgacttcactgtaattctctcttctctactttcttgtgctaagtcatcatcaacaatttatataattctatcttctctgatatctcgtgctacttcatcaaggattttcgtctgattttcactgtctccaggtacctagaaaatctgcgcatcagtggggaggtaccgcaaagtctctttagtctcccttcaattcaaacactgtgagtagtcattgcttgctagtttaaaacataatgctagtgtcaactttgagctaaactgatagatataaatagtatagttcaaattcagttctgtgattacttcaagacaaatgcaggaggcttcggggcaaccgtctgaatggcaccctaaatatagcagacttcagcagtcagctccaactagtcgatttgcgggacaactttatcacagcactaactgtaggaacacaatacaagaagactctcatgtaagaatactctcactgtttttgcttattggctgatcagccatagccaaaatttgaattttaaacattaactttaagagttgattttgaggttttctcaacgtagtttattttctagcattggcttttaaatcgctaagaacgcagatataatagtctgatccatgaactatttttagttgcttcgttcatttttccacggcttatatcagccacagttacttttatcacaatcttcagagctctggctgattcacctctgttcacaggctctcaggaaatccatattgcaaccaagtgaacgacgacgtgcactgcaaagccaccggacaatcgaacccggcattgccaccatacaagactacctccaactgccctgccctgcctcccacatgcctctcaacccagcagctgagcccaacctgcatttgctctgtgccatacagaggcacactcttcttcagatcaccaggtttttcagacctgggcaacagctcatacttcattcagctggaggggacaatgaaagccaagttcttgaacctcagtctcccggtcgattcaattgcgatccacgacccgtttgtcgacaccaacaacaacttggagatgagcttggaggtgtaccccagtggcaaggatcagtttagtgagcaagacatttctggcattggtttcatcctgagtaaccagacatataagcctccttctaactttggcccatactatttccttggacagacctactcctttgctaatggtaagaccatactccctctggtttttaatatatggaatcgttaactttttgacatatgtttgactattcatcttattaaaaaaaaattgtgcaaatatccgaaaatgtaagtcatgttttaaagtaattttagtgataaatccaagccacaatcaaataaatagtaatttctttgaataaaacgactggtcaaatacgtatcaaaaagtcaatggcgtcaaatagtaattatgtaatttctttgacacacatttgaccattcatactttagatgacatctcctgctgtggttacagagactcaacaaatgctcattttttagataatggaagcttttattgaactcagtcaacaaatgctcatgtgtgtgttgaatcattgtttcatgaattcaggggcgttgcaaacttcaaaatcgaacacaaaccacatcccgcttatcgtcggtgcttcggttggaggtgcagctgtaattgcagcattgcttgcactcacaatctgcattgctagaaggaagagaagtccaaagcagactgaagataggagccagtcttatggtaagcactgttcatcatctaattcagtataacaacatctcattgttgcatactttcttctgaatgtggcatcacaactgcaatcatctgcagtttcctgggacatcaagagcaccagcactagcactgccccgcaggtgcgaggtgcgaggatgttctccttcgacgagctgaagaaggtcaccaacaacttctcggaggccaatgacatcggcaccggaggctacgggaaggtgaagaagccattgctgatcacttctgatacattctgtcctcctttgacatgttcagaacttgaaatgttcagaacttgaaatattcagagctgttgatcactgcaggtttacaggggaacacttcctactggtcagctggttgccgtgaagagatcccagcaaggctccctgcagggcaacctcgagttcaggactgagatcgagctcctgtccagggttcatcacaagaatgtcgtcagcctagtcggattctgcttcgaccagggcgagcagatgcttgtctacgagtatgtccccaatggcaccctcaaggagagcctcactggtaaaactactacttatctatctatctatctatctatctatctatcttctatctatctatctatctatctatctatctatctatctatctatctattatctatctatctattatctatctatcttctattatatactaaaagtccattaaacttcctcaaaacgctctcaagccgacacgtggcgctctaataaattagagaaaatcctagaaaatctgagaaaaaagcaaaacatccattcgttgatcttcacttaaatcggtgggtccaatattataagccgttagattagatattgatcttcttttgctatcatttgattcatctatctattatctattatctatctatctattatatactaaaagtccattaaacttcctcaaaacgctctcaagccgacacgtggcgctctaataaattagagaaaatcctagaaaatctgagaaaaaagcaaaacatccattcgttgatcttcacttaaatcggtgggtccaatattataagccgttagattagatattgatcttcttttgctatcatttgattcattgttaaatatacttttatgcatacgtatagttttacatatttcacaaaagtttttgaataagacgagcggtcaaacatgtgctaaaaagtcaactgtgtcaaataaaacgaaacggagggagtaatagaagatagatagattgatttattatcaataataaaaattattattattatttttgtctccactatgtacatggaaaataaaaagaaggaaaggttaattacgtacgtacacgggaaggagtaaccattgttggttacgtacgtaggtacctatgtaacagaaccgaagggaacggaaggagtagccgctgttcaggttgttttaagatcaatatctaatctaacggcttataatattggacccaccgatttaagtgaagatcaacgaatggatgttttgcttttttctcagattttctaggattttctgaaatatgtaaaactatacgtatgcataaaagtatatttaacaatgaatcaaatgatagcaaaagaattaataattatttaaattttttgaataagacgagcggtcaaacatgtgctaaaaagtcaactgtgtcaaataaaacgaaacggagggagtatatagtaaaattccattagtctctcctgtacatactgttcgtttggaaaaaaacaaacgacgtttactggaaaaacttgcgatgggaaaaaaatacctttacctatactgttcatttgaaaaaagcacgtaagtacgataaaaaaagctataaaaccttaaagaaaaatatatgtgttagaaccatcgtggaaaaatagactatctttttaaataggattttctacactataaaaatattttctaggattttctgaaatatgtaaaactatacgtatgcataaaagtatatttaacaatgaatcaaatgatagcaaaagaattaataattatttaaattttttgaataagacgagcggtcaaacatatgctaaaaagtcaactgtgtcaaataaaacgaaacggagggagtatatagtaaaattccattagtctctcctgtacatactgttcgtttggaaaaaaacaaacgacttttactggaaaaacttgcgatgggaaaaaaatacctttacctatactgttcatttgaaaaaagcacgtaagtacgataaaaaaagctataaaaccttaaagaaaaatatatgtgttagaaccatcgtggaaaaatagactatctttttaaataggattttctacactataaaaatataatttaatgctcataaatatggtcatgtggcacttctacaatcactcttagactgccacgtggaactacgtaatctcgtcatcaattttcatttaaattgatggacctgttatgaataataggggatgaaaacaaactagacgctaaaatatagatatttatcaaaatataaacaataatatgatactctgaagattatcaataatatgatactctgaagattatcacggtcgtatgtatgtttaacgatacattttttaatgaccaacctcactcattttaaaagagaatattgtatctataccatataaaatttaagcagtactgattaacactacaaacaaattgtgtcaacgcaaaacgtaaaaaataatatttttaaggaaagaattagtttcatcacatccatcttctctttctttcctaaagggcaacaagtagtaaacataattataggagggacatacatatgattaagttgaggcagacccattgaaggccactgttgataatagcactcaacttcctacttactaatgatctttgagggtgctgatagtgaaatacgacttaaaattatgctccatgctagctttgataggcacgaatacgtcactataaaacccatgtttgaaggcaaaagagaaataaatccttggtagctccacctgttagagggatattgatgtctaatttttatcagtgttatcccattaaccaatagaagcagtgtttttagaatatttattTAtatatttagaaataagagttgagataaatatttaggtatgcatatagtggagattaatgttttatgtattaataatgtattaggcttattttggtgatacagatgtaattccatttattaaaaaggcatctagcaacaatgatagttagtaatggtgacaataggtgagtttacgtgtattatgaacgaaaatgatttttgtttgaatataagaaacattcttatcgtttattaaagtctacggtctatttcacgacatatatttttttaattgtaaggcaaaatctataatttcttatatgcatatagtgagatatgacttaattttattaacaataaataaggtgcccgcgcatatgcgcgggcttcctttctagttgttattaattcttaaagatgaatgcgaaaatgtcgacagattttatagtggtctagctctgatactgatagtctccatggtttgaaatttcgaaccctaccggcaagcacaaatctccacctacattttcggatttttttcaaatatttgggaatttggtcaatttgtttaaattcaatcgaaatatgttaaaatttgaaataattttggtaaaaaacaccgaaattcatgatgttttttttcaaaattccgacaaccatcgaaatttcggaaatttcagtggttattgaaagtgcaaacactgattgtctctcatggtggtgccatcgaaaactttgttcagggaaatctggtgtgaggctggactggaagcggcggctccgggttgtcctcggtgcggcgaagggtatcgcctacctgcatgagctcgctgaccctccgatcatccaccgtgacatcaagtcgagcaatgttctcctcgatgagcggctcaacgccaaggtctccgacttcggcctgtccaagcttctcggcgaagacggtcgtggccagatcaccacccaagtcaagggcacaatggtaagtagtactacctccatcccaaaatgtttgacgccgttgacttttttaaaaatgtttgaccgttcgtcttattcaaaaaatttaagtaattgttaattctttttctatcatttgatttattgttaaataaatttttatgtatacatatagttttacacatatcacaaaagtttttgaataaaacgaacggtcaaacatgtttaaaaaagtcaacggtgtcaaacatttaaggaagatactccctccgtccctaaatgtttgacaccgttgacatttttaaacatgtttgaccattcgtcttattcaaaaaatttatgtaattattaattattttcctatcatttgtttcattgttaaatatattttatgtatatatatagttttacatatttcacAaaaaaatttaaataagacgaacggtaaaacgtgtataaaaaagtcaacagcgtcaaacatttagggatggagggagtatttcataacgaccaaccaatccacctaaaagcttaaactattcatctccaatagttttacttaaaagcttaaaactttttttctccaaccatcaagttgacccaaaagcttgaattattcggtctccgaacaatgaattgacctaaaagcttaagtaatttttatataatgatttaatggttcttgagaggtacaacgatagtttaaaatttagtctctctttggacttctcgaagcatAaaaaaaaggtttttgccttcaaccattgagtcaacacaaaaactttaattgttggctgcgtgcatccacttggatgtagaggccggcttaatccatttttaaaaaaactaaattgtattatgtccgaccaaccagttcagccaaaagcttaaactatcttcttcttctttttttttttttttttgctatcggtgtgacacgtgtggatgtgacgtggcaggggtacctggacccggagtactacatgacgcagcagctgacggaccggagcgacgtgtacagcttcggcgtgctgctgctggaggtgatcacggcgaggaagccgctggagcgcggccgctacgtggtccgggaggtcaaggaggcggtggaccgccgcaaggacatgtacggcctccacgagctcctcgaccccgcgctgggggcctcctcggcgctcgccggcctcgagccgtacgtcgacctggccctccgctgcgtcgaggagtccggcgccgaccgcccctccatgggcgaggccgtcgccgagatcgagcggatcgccaaggtggccggcgctgggggtgcggccgccgccgagtcggcggcgtcggactccatgagctacgccgctagccggacgccgcgccacccctatggcggcggcggcggcgacagcgcgtcggagtatagcggcggcgggctgccgtcgatgagggtggagcccaagtgaagatggtggatttgtttccaacgttttgtgtacagcttgatgatttagagtatgtacgatttcatttgtgtaaattttggtcgtctatgcatgctaagtttggatttttgaatttgaatgtttgatgatggctaattgagaatttggggtcgttgtcaatcgaactataccc
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| CDS seq | atgggggtttctccatggattatcatcttcttgttgattgttcttgtgcaagcttttgtcgcttcggccgatacgaacgcacaggacacttctggacttaacgggcttgcaggtagctggggcagcgcaccatcgaattgggctggcaacgatccatgtggagacaaatggattgggataatttgcaccgggaaccgggtcacatccataagactgtcaagtttcggactgtccgggacgctttccggggacattcagtccttatcagaattgcagtacctggacttatcctacaacaagaacttgaatggcccccttccttcaaccattggaaccttgagcaagctccaaaacttaattcttgtcggctgcggctttacaggtgaaataccaaaggagataggccagctctcaaacctgatatttctatcattgaactccaacaagttcactggtagcataccgccatcgcttggcggcctctcaaagctatattggtttgatctggctgacaatcagctcactggaggacttccaatatccaatgcgacaagtcctggtctggacaatctcacaagtactaagcacttccattttgggataaaccagctctctggcagcatacctagccagattttcaactcaaatatgaagctgatacatctgcttcttgacaacaacaaattctccggtagcatcccttctaccttaggccttcttaatacactggaagttctgcgtttcgataacaatgcgcagttgaccggaccggttcctaccaacctcaagaacctaaccaagcttgcagaattccatctagcaaacagcaatcttactggtccattgccagacctaactggaatgagctcactcagctttgtggacatgagcaacaacagcttcagtgcatctgatgcgccctcctggataaccactttgccatcgtcattgacttcactgtacctagaaaatctgcgcatcagtggggaggaggcttcggggcaaccgtctgaatggcaccctaaatatagcagacttcagcagtcagctccaactagaaatccatattgcaaccaagtgaacgacgacgtgcactgcaaagccaccggacaatcgaacccggcattgccaccatacaagactacctccaactgccctgccctgcctcccacatgcctctcaacccagcagctgagcccaacctgcatttgctctgtgccatacagaggcacactcttcttcagatcaccaggtttttcagacctgggcaacagctcatacttcattcagctggaggggacaatgaaagccaagttcttgaacctcagtctcccggtcgattcaattgcgatccacgacccgtttgtcgacaccaacaacaacttggagatgagcttggaggtgtaccccagtggcaaggatcagtttagtgagcaagacatttctggcattggtttcatcctgactgtaattgcagcattgcttgcactcacaatctgcattgctagaaggaagagaagtccaaagcagactgaagataggagccagtcttatgtttcctgggacatcaagagcaccagcactagcactgccccgcaggtgcgaggtgcgaggatgttctccttcgacgagctgaagaaggtcaccaacaacttctcggaggccaatgacatcggcaccggaggctacgggaaggtttacaggggaacacttcctactggtcagctggttgccgtgaagagatcccagcaaggctccctgcagggcaacctcgagttcaggactgagatcgagctcctgtccagggttcatcacaagaatgtcgtcagcctagtcggattctgcttcgaccagggcgagcagatgcttgtctacgagtatcggcggctccgggttgtcctcggtgcggcgaagggtatcgcctacctgcatgagctcgctgaccctccgatcatccaccgtgacatcaagtcgagcaatgttctcctcgatgagcggctcaacgccaaggggtacctggacccggagtactacatgacgcagcagctgacggaccggagcgacgtgtacagcttcggcgtgctgctgctggaggtgatcacggcgaggaagccgctggagcgcggccgctacgtggtccgggaggtcaaggaggcggtggaccgccgcaaggacatgtacggcctccacgagctcctcgaccccgcgctgggggcctcctcggcgctcgccggcctcgagccgtacgtcgacctggccctccgctgcgtcgaggagtccggcgccgaccgcccctccatgggcgaggccgtcgccgagatcgagcggatcgccaaggtggccggcgctgggggtgcggccgccgccgagtcggcggcgtcggactccatgagctacgccgctagccggacgccgcgccacccctatggcggcggcggcggcgacagcgcgtcggagtatagcggcggcgggctgccgtcgatgagggtggagcccaagtga
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| Protein seq | MGVSPWIIIFLLIVLVQAFVASADTNAQDTSGLNGLAGSWGSAPSNWAGNDPCGDKWIGIICTGNRVTSIRLSSFGLSGTLSGDIQSLSELQYLDLSYNKNLNGPLPSTIGTLSKLQNLILVGCGFTGEIPKEIGQLSNLIFLSLNSNKFTGSIPPSLGGLSKLYWFDLADNQLTGGLPISNATSPGLDNLTSTKHFHFGINQLSGSIPSQIFNSNMKLIHLLLDNNKFSGSIPSTLGLLNTLEVLRFDNNAQLTGPVPTNLKNLTKLAEFHLANSNLTGPLPDLTGMSSLSFVDMSNNSFSASDAPSWITTLPSSLTSLYLENLRISGEEASGQPSEWHPKYSRLQQSAPTRNPYCNQVNDDVHCKATGQSNPALPPYKTTSNCPALPPTCLSTQQLSPTCICSVPYRGTLFFRSPGFSDLGNSSYFIQLEGTMKAKFLNLSLPVDSIAIHDPFVDTNNNLEMSLEVYPSGKDQFSEQDISGIGFILTVIAALLALTICIARRKRSPKQTEDRSQSYVSWDIKSTSTSTAPQVRGARMFSFDELKKVTNNFSEANDIGTGGYGKVYRGTLPTGQLVAVKRSQQGSLQGNLEFRTEIELLSRVHHKNVVSLVGFCFDQGEQMLVYEYRRLRVVLGAAKGIAYLHELADPPIIHRDIKSSNVLLDERLNAKGYLDPEYYMTQQLTDRSDVYSFGVLLLEVITARKPLERGRYVVREVKEAVDRRKDMYGLHELLDPALGASSALAGLEPYVDLALRCVEESGADRPSMGEAVAEIERIAKVAGAGGAAAAESAASDSMSYAASRTPRHPYGGGGGDSASEYSGGGLPSMRVEPK |
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| Function | Probable leucine-rich repeat receptor-like protein kinase At5g49770 [UniProtKB/Swiss-Prot:Q9LT96] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_12g0006720 | OsLiXu_12g0006720.01 | Chr12 | 5436505 | 5446528 | + | NAM | ||
| CDS seq | atgggggtttctccatggattatcatcttcttgttgattgttcttgtgcaagcttttgtcgcttcggccgatacgaacgcacaggacacttctggacttaacgggcttgcaggtagctggggcagcgcaccatcgaattgggctggcaacgatccatgtggagacaaatggattgggataatttgcaccgggaaccgggtcacatccataagactgtcaagtttcggactgtccgggacgctttccggggacattcagtccttatcagaattgcagtacctggacttatcctacaacaagaacttgaatggcccccttccttcaaccattggaaccttgagcaagctccaaaacttaattcttgtcggctgcggctttacaggtgaaataccaaaggagataggccagctctcaaacctgatatttctatcattgaactccaacaagttcactggtagcataccgccatcgcttggcggcctctcaaagctatattggtttgatctggctgacaatcagctcactggaggacttccaatatccaatgcgacaagtcctggtctggacaatctcacaagtactaagcacttccattttgggataaaccagctctctggcagcatacctagccagattttcaactcaaatatgaagctgatacatctgcttcttgacaacaacaaattctccggtagcatcccttctaccttaggccttcttaatacactggaagttctgcgtttcgataacaatgcgcagttgaccggaccggttcctaccaacctcaagaacctaaccaagcttgcagaattccatctagcaaacagcaatcttactggtccattgccagacctaactggaatgagctcactcagctttgtggacatgagcaacaacagcttcagtgcatctgatgcgccctcctggataaccactttgccatcgtcattgacttcactgtacctagaaaatctgcgcatcagtggggaggaggcttcggggcaaccgtctgaatggcaccctaaatatagcagacttcagcagtcagctccaactagaaatccatattgcaaccaagtgaacgacgacgtgcactgcaaagccaccggacaatcgaacccggcattgccaccatacaagactacctccaactgccctgccctgcctcccacatgcctctcaacccagcagctgagcccaacctgcatttgctctgtgccatacagaggcacactcttcttcagatcaccaggtttttcagacctgggcaacagctcatacttcattcagctggaggggacaatgaaagccaagttcttgaacctcagtctcccggtcgattcaattgcgatccacgacccgtttgtcgacaccaacaacaacttggagatgagcttggaggtgtaccccagtggcaaggatcagtttagtgagcaagacatttctggcattggtttcatcctgactgtaattgcagcattgcttgcactcacaatctgcattgctagaaggaagagaagtccaaagcagactgaagataggagccagtcttatgtttcctgggacatcaagagcaccagcactagcactgccccgcaggtgcgaggtgcgaggatgttctccttcgacgagctgaagaaggtcaccaacaacttctcggaggccaatgacatcggcaccggaggctacgggaaggtttacaggggaacacttcctactggtcagctggttgccgtgaagagatcccagcaaggctccctgcagggcaacctcgagttcaggactgagatcgagctcctgtccagggttcatcacaagaatgtcgtcagcctagtcggattctgcttcgaccagggcgagcagatgcttgtctacgagtatcggcggctccgggttgtcctcggtgcggcgaagggtatcgcctacctgcatgagctcgctgaccctccgatcatccaccgtgacatcaagtcgagcaatgttctcctcgatgagcggctcaacgccaaggggtacctggacccggagtactacatgacgcagcagctgacggaccggagcgacgtgtacagcttcggcgtgctgctgctggaggtgatcacggcgaggaagccgctggagcgcggccgctacgtggtccgggaggtcaaggaggcggtggaccgccgcaaggacatgtacggcctccacgagctcctcgaccccgcgctgggggcctcctcggcgctcgccggcctcgagccgtacgtcgacctggccctccgctgcgtcgaggagtccggcgccgaccgcccctccatgggcgaggccgtcgccgagatcgagcggatcgccaaggtggccggcgctgggggtgcggccgccgccgagtcggcggcgtcggactccatgagctacgccgctagccggacgccgcgccacccctatggcggcggcggcggcgacagcgcgtcggagtatagcggcggcgggctgccgtcgatgagggtggagcccaagtga
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| Protein seq | MGVSPWIIIFLLIVLVQAFVASADTNAQDTSGLNGLAGSWGSAPSNWAGNDPCGDKWIGIICTGNRVTSIRLSSFGLSGTLSGDIQSLSELQYLDLSYNKNLNGPLPSTIGTLSKLQNLILVGCGFTGEIPKEIGQLSNLIFLSLNSNKFTGSIPPSLGGLSKLYWFDLADNQLTGGLPISNATSPGLDNLTSTKHFHFGINQLSGSIPSQIFNSNMKLIHLLLDNNKFSGSIPSTLGLLNTLEVLRFDNNAQLTGPVPTNLKNLTKLAEFHLANSNLTGPLPDLTGMSSLSFVDMSNNSFSASDAPSWITTLPSSLTSLYLENLRISGEEASGQPSEWHPKYSRLQQSAPTRNPYCNQVNDDVHCKATGQSNPALPPYKTTSNCPALPPTCLSTQQLSPTCICSVPYRGTLFFRSPGFSDLGNSSYFIQLEGTMKAKFLNLSLPVDSIAIHDPFVDTNNNLEMSLEVYPSGKDQFSEQDISGIGFILTVIAALLALTICIARRKRSPKQTEDRSQSYVSWDIKSTSTSTAPQVRGARMFSFDELKKVTNNFSEANDIGTGGYGKVYRGTLPTGQLVAVKRSQQGSLQGNLEFRTEIELLSRVHHKNVVSLVGFCFDQGEQMLVYEYRRLRVVLGAAKGIAYLHELADPPIIHRDIKSSNVLLDERLNAKGYLDPEYYMTQQLTDRSDVYSFGVLLLEVITARKPLERGRYVVREVKEAVDRRKDMYGLHELLDPALGASSALAGLEPYVDLALRCVEESGADRPSMGEAVAEIERIAKVAGAGGAAAAESAASDSMSYAASRTPRHPYGGGGGDSASEYSGGGLPSMRVEPK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_12g0006720 | OsLiXu_12g0006720.02 | Chr12 | 5446397 | 5446700 | + | IsoSeq | ||
| CDS seq | atgtacgatttcatttgtgtaaattttggtcgtctatgcatgctaagtttggat |
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| Protein seq | MYDFICVNFGRLCMLSLD |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.549694 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0210400 | RBH | 2.513637 | 3.010038 | 1.768092 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g10740 | RBH | 1.701596 | 1.922263 | 0.467923 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0210400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0006880 | RBH | 1.360748 | 80.511162 | 1.819556 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0006960 | RBH | 0.471570 | 13.219993 | 0.741597 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0006950 | RBH | 4.705822 | 58.858364 | 3.294276 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0006850 | RBH | 0.569401 | 1.076777 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0006690 | RBH | 8.347888 | 17.757616 | 2.572772 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0086000 | RBH | 15.6693195 | 97.128075 | 1.243659 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0006670 | RBH | 0.886827 | 2.617793 | 0.153153 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0091700 | RBH | 13.8745185 | 79.797226 | 0.3154225 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0006570 | RBH | 0.246652 | 0.867439 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0006840 | RBH | 0.395331 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0006690 | RBH | 0.902924 | 37.632534 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0008650 | RBH | 0.062674 | 0.0 | 0.175730 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0006610 | RBH | 0.607057 | 14.644185 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G006730 | RBH | 0.971521 | 7.471611 | 1.236098 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0006710 | RBH | 3.879267 | 92.575188 | 0.905274 |
