Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_12g0002340 | OGI:12004550 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr12:1681537-1686942 | ||||||||
| Gene Symbol | CIPK32, OsCIPK32, OsSnRK3.34, SnRK3.34 | ||||||||||
| DNA seq | attccaactcactctcgtctcctcttcttcttcttcaacctctcctttcatacatgctgttgctgccaccactactgctcttcctcgcctcttcctgatctcagcagccatttccctttcctgggatctcctcctcttctactactcttcttccatcgccataagagcagccgcagatcgatcgaattgcattgcagtcttttgcagatttcagcttaattgccggtgagtcgttctgatgcctcttctcttcttgatttctccaacctactaaattgctttcatcccctctctagctatctctgcaactttctttgcattgtgtgcgttgtttccttttcaatctctgtagatgttgtttggtgctgtgtgctgagagaataaggttgctgaatttagcttgtcgtttctgtatccattggagattttctcggctttcttgaaattttctgtccccgtttactcctgtgggttcatcactgctaactacaagctgctgggatgtgattatttctaccctaccagtaatcctatggaaactgcttccagggttactttggtggagtacttcagttcctgacgactgagaatatctgaatatgtgttcattctcgaaccttcttcgtcttgctgctcctcgatccatacataaaaaaagttcctgcctttcctgtttgagagttctacccgcttaatgatcttgatttgtgttatttcaaaaagaaatattcttgatttgtactgtttctggaaatatgccctgccctcttaacctttgatgaatattcaatagcttctttgcagcttcctcgtgtctcattgactaaatatgctgtccagatccaaatgatgctctctttcctttttctactgcaaattgatcggtcaagttttcggaaaaataaattaatggattcacatgatcttctaacttactaccaattaatttaattgactagtccacaaatcttatggtatcttacacactataaaatcttggagaactgattgctcaacagctttgcatgtgtgtctctgtagcagaagatactattatatgttttcaaagactaaaatttgactagtgcatatatcattttggggaagaaataagatgagaaatacagcatgtacatgtcattgtgctcctgtacctacaagtttgtcaacaggcttccgatctttttcagctaataatgaataggctccggatgaaatttgttcacacaatcgcacatacacaaaacatctttatcatgtatcatctattcatctttttccatgtatcaacagtaactgagcaaacgttttccacaggacagtgaagtgaaagcatcttcaagggcgtggaagctctctgagattccaaagggtcacaaggcaggggatgagtacaaccaaagtgaagagacgtgtgggaaagtatgagctaggaagaacaattggagagggcacattcgcgaaggtcaagttcgcgagggataccgagaccggtgatccagtagccatcaagatcctagataaggagaaagtcctcaagcataagatggtcgaacaggtcactgtcaaacaccagctaacgaccaagttctgaatctgaattattgtagcacctttaattgtttggtgatatttcacatctggaatattatgatcctgtccttcagatttccctttatttaagtgactgtccttccgattctttttgcctgttaattactttcatgggacaaaaaacatggcactttgttcagggtttagtagcttttgatggaagtaataccttttgctgatgggtaactctgtttttggaatgcagattaaaagggaaatctcgacaatgaagttgattaagcacccaaatgttgtccgtatatatgaggtaattaaaaatatcctcttccttttgtgttggtatctcagttaatcctatatttgttcagcagaaaatagctaggaagagagaaaggtttttaaagcatgtctagggtccatgccagaacatcaaagtatctataggccccatcgtttggcttttttcctaataagccaaaacggcttattaggaaataaaaatgaatttataggtaaaacttttatatatgtgttcttggtaacttaaaagccaatgctaaaaaacaaactacgttgaaaatatttcaaaatcaatctcaaaattaagtttaaaaatttaaattttggctttttctttggctgattaggccatccgatgggagccgattaatcataattttgtttacagaaattccagatgcaattagtcagaatctttttattaggggacactgctaatcgtcaaatcaatgttctctctgatttcaggtgatgggaagcaagacaaagatctacattgttttagaatatgttaccggtggtgagctctttgatacaattgtaagtgattctgctatgttgtccatttccaatttaaatagttatatcttcttttcaaaacacatataaaaatacatttttaatttgtactgacatttacttgaattcccttttgtatttaggttaaccatggtcgtatgagggaagatgaggcaagaaggtacttccaacaattaattaatgctgttgattattgtcatagcaggggtgtgtaccacagggacttaaaagtgagttcatctccctttcctctgctgcctcttttgtcaacaagaaatatatttcagaatctaagcttccttccaaaagaaacaatctaaattacaatacttgcagccagaaaatttactactagattcatatgggaatctgaaggtctctgattttgggctgagtgcactttctcagcaaattaaggtaaaggtttattgctttatactgtatcatctaagtatgtaccaacaggctacaaatattacagttcagaaattattagataatcgttatatgtctcttcaattaatatttcTtttttctttgtggccttgttcaggatgatggtttgctgcacacaacctgcgggacaccaaattatgttgcaccggaggtaatgtcagaaagagaaattatagaattttaacctaccatacttggaactatttttcatcagaagccattaataattcacacatttcatccacctttgtgataggtccttgaagatcaaggatatgatggagcaatggcagatttgtggtcatgtggagttatcctgttcgttctgctagcagggtatttgccttttgaggactctaatcttatgacgttgtataagaaagtgagaattgtaccacttttagatcattgttgttgtattaatatttcatgcttatttgattcttctctgcacttcctggcagatatcaaatgcagagtttacgtttccaccttggacgtcttttcctgccaagaggttgttaacaagaatccttgatccaaacccaatgacggtatgctagaacaactgaataacatagtagataattaggtataatgcatcactgaaggcactgtaatgtgtcttctaataacacagtagatcctgtaatgcccgtagcattcatcaaccagataatactcaattctacaggggctagcactccttttagaaagctcttctatgcttaataataatcattaaaacagatagtaataactaataaaataatatcatctttcttcgtgacacaacattggatgatttcttaagctaactacttgagctactgttgtagagagtaacaattccagaaatattagaggatgagtggttcaaaaagggctacaaacgcccagagtttgacgaaaaatatgacacaacattggatgatgttgatgctgtcttcaatgactctgaagtgagtaaactgcaatatgcacttgaatttctgtttcacatgacatgaagataaaagcatgccagttgctaaatggtttgaccactgtgatttgacctcctccaggagcaccatgtgacagaaaagaaagaagaaccagaagctctcaatgcatttgaactgatttcaatgtcagcaggcctcaatcttgggaatttgtttgattcagagcaggtacgtgatctccctatttaatcaatattgaccaacaaccttttgaacctattctccctgtatcatttttatgaacgaacctgtaacttaaagttaagcgtcattgtttttggttcaacttatacctccctaaatcaagctggaaacatgtaaactggctcactggcactttgtcaatttactcaatcatatggttggagaatgctgcatgtcacaagtcccagaatatatgtagtagttcattggtcagaatgtcttttgatttttgcacctcataattctgccataactttgttatagttttgcaacttattctgctgtactttaattttgttcacactatttcaggaattcaaaagagaaacaaggttcacatcaaaatgtccaccaaaagaaattgtccgcaagattgaggaagccgcaaaacctctaggatttgatgttcagaagaaaaattacaaggtatgctccccttgcctaacaactatctgcatgaatatccgttttaaagtaatgggttctagggacaatttatagcaaattcaaatatatattttctgcgtgctgaatttttttttattgattgaccagttaaggttggaaaaggtaaaagcagggagaaaaggaaatctcaatgttgctactgaggtaatatgaagaactgctgtactgcaatctggtttgtgtaagcttcttcaatctaacatttattgtgcactattattcagatactgcaggttgcaccctctcttcatatggttgaagtacgaaaagcaaaaggcgacaccctcgaatttcataaggtagatcatgccaattaaaagttgatgctcatgaattatcattggaaaattgagtcagtgctttgatgattggatcaactactcacagaattatgactatgttttttttttcttttgcaacatttggttgaatggcttgtactgaatcacttcaaacttgtaatgtgttgcagttctacaagaacctctccagaaccttaaaggatgttgtttggaaatcagatgatcttcaaaatcaactttcctagagtaacttgggagaggaggaatgggtgaactattttagcatcccattcttttgaatcagcattcccatttctagaggctggaaaagcagaaagcatgttcattgcatctgtaattagatgtgaatggccctgtaaactatgtttggtctccactagtgttgtaaatgctgctcttatttgtcagagaacccttgtgatagctcaagtgaagctgatcactcaatgggttttgtgtgtcaagttttgtatgtaaatcagaatcttgtgaggaacaagtatccagcattattcattttcatttacactgtg
More
|
||||||||||
| CDS seq | atgagtacaaccaaagtgaagagacgtgtgggaaagtatgagctaggaagaacaattggagagggcacattcgcgaaggtcaagttcgcgagggataccgagaccggtgatccagtagccatcaagatcctagataaggagaaagtcctcaagcataagatggtcgaacagattaaaagggaaatctcgacaatgaagttgattaagcacccaaatgttgtccgtatatatgaggtgatgggaagcaagacaaagatctacattgttttagaatatgttaccggtggtgagctctttgatacaattgttaaccatggtcgtatgagggaagatgaggcaagaaggtacttccaacaattaattaatgctgttgattattgtcatagcaggggtgtgtaccacagggacttaaaaccagaaaatttactactagattcatatgggaatctgaaggtctctgattttgggctgagtgcactttctcagcaaattaaggatgatggtttgctgcacacaacctgcgggacaccaaattatgttgcaccggaggtccttgaagatcaaggatatgatggagcaatggcagatttgtggtcatgtggagttatcctgttcgttctgctagcagggtatttgccttttgaggactctaatcttatgacgttgtataagaaaatatcaaatgcagagtttacgtttccaccttggacgtcttttcctgccaagaggttgttaacaagaatccttgatccaaacccaatgacgagagtaacaattccagaaatattagaggatgagtggttcaaaaagggctacaaacgcccagagtttgacgaaaaatatgacacaacattggatgatgttgatgctgtcttcaatgactctgaagagcaccatgtgacagaaaagaaagaagaaccagaagctctcaatgcatttgaactgatttcaatgtcagcaggcctcaatcttgggaatttgtttgattcagagcaggaattcaaaagagaaacaaggttcacatcaaaatgtccaccaaaagaaattgtccgcaagattgaggaagccgcaaaacctctaggatttgatgttcagaagaaaaattacaagttaaggttggaaaaggtaaaagcagggagaaaaggaaatctcaatgttgctactgagatactgcaggttgcaccctctcttcatatggttgaagtacgaaaagcaaaaggcgacaccctcgaatttcataagttctacaagaacctctccagaaccttaaaggatgttgtttggaaatcagatgatcttcaaaatcaactttcctag
More
|
||||||||||
| Protein seq | MSTTKVKRRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKMVEQIKREISTMKLIKHPNVVRIYEVMGSKTKIYIVLEYVTGGELFDTIVNHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDSYGNLKVSDFGLSALSQQIKDDGLLHTTCGTPNYVAPEVLEDQGYDGAMADLWSCGVILFVLLAGYLPFEDSNLMTLYKKISNAEFTFPPWTSFPAKRLLTRILDPNPMTRVTIPEILEDEWFKKGYKRPEFDEKYDTTLDDVDAVFNDSEEHHVTEKKEEPEALNAFELISMSAGLNLGNLFDSEQEFKRETRFTSKCPPKEIVRKIEEAAKPLGFDVQKKNYKLRLEKVKAGRKGNLNVATEILQVAPSLHMVEVRKAKGDTLEFHKFYKNLSRTLKDVVWKSDDLQNQLS |
||||||||||
| Function | CBL-interacting protein kinase 32 [UniProtKB/Swiss-Prot:Q2QY53] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_12g0002340 | OsLiXu_12g0002340.02 | Chr12 | 1681548 | 1686936 | + | NAM | ||
| CDS seq | atgagtacaaccaaagtgaagagacgtgtgggaaagtatgagctaggaagaacaattggagagggcacattcgcgaaggtcaagttcgcgagggataccgagaccggtgatccagtagccatcaagatcctagataaggagaaagtcctcaagcataagatggtcgaacagattaaaagggaaatctcgacaatgaagttgattaagcacccaaatgttgtccgtatatatgaggtgatgggaagcaagacaaagatctacattgttttagaatatgttaccggtggtgagctctttgatacaattgttaaccatggtcgtatgagggaagatgaggcaagaaggtacttccaacaattaattaatgctgttgattattgtcatagcaggggtgtgtaccacagggacttaaaaccagaaaatttactactagattcatatgggaatctgaaggtctctgattttgggctgagtgcactttctcagcaaattaaggatgatggtttgctgcacacaacctgcgggacaccaaattatgttgcaccggaggtccttgaagatcaaggatatgatggagcaatggcagatttgtggtcatgtggagttatcctgttcgttctgctagcagggtatttgccttttgaggactctaatcttatgacgttgtataagaaaatatcaaatgcagagtttacgtttccaccttggacgtcttttcctgccaagaggttgttaacaagaatccttgatccaaacccaatgacgagagtaacaattccagaaatattagaggatgagtggttcaaaaagggctacaaacgcccagagtttgacgaaaaatatgacacaacattggatgatgttgatgctgtcttcaatgactctgaagagcaccatgtgacagaaaagaaagaagaaccagaagctctcaatgcatttgaactgatttcaatgtcagcaggcctcaatcttgggaatttgtttgattcagagcaggaattcaaaagagaaacaaggttcacatcaaaatgtccaccaaaagaaattgtccgcaagattgaggaagccgcaaaacctctaggatttgatgttcagaagaaaaattacaagttaaggttggaaaaggtaaaagcagggagaaaaggaaatctcaatgttgctactgagatactgcaggttgcaccctctcttcatatggttgaagtacgaaaagcaaaaggcgacaccctcgaatttcataagttctacaagaacctctccagaaccttaaaggatgttgtttggaaatcagatgatcttcaaaatcaactttcctag
More
|
|||||||
| Protein seq | MSTTKVKRRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKMVEQIKREISTMKLIKHPNVVRIYEVMGSKTKIYIVLEYVTGGELFDTIVNHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDSYGNLKVSDFGLSALSQQIKDDGLLHTTCGTPNYVAPEVLEDQGYDGAMADLWSCGVILFVLLAGYLPFEDSNLMTLYKKISNAEFTFPPWTSFPAKRLLTRILDPNPMTRVTIPEILEDEWFKKGYKRPEFDEKYDTTLDDVDAVFNDSEEHHVTEKKEEPEALNAFELISMSAGLNLGNLFDSEQEFKRETRFTSKCPPKEIVRKIEEAAKPLGFDVQKKNYKLRLEKVKAGRKGNLNVATEILQVAPSLHMVEVRKAKGDTLEFHKFYKNLSRTLKDVVWKSDDLQNQLS
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_12g0002340 | OsLiXu_12g0002340.01 | Chr12 | 1681537 | 1685909 | + | NAM | ||
| CDS seq | atgagtacaaccaaagtgaagagacgtgtgggaaagtatgagctaggaagaacaattggagagggcacattcgcgaaggtcaagttcgcgagggataccgagaccggtgatccagtagccatcaagatcctagataaggagaaagtcctcaagcataagatggtcgaacagattaaaagggaaatctcgacaatgaagttgattaagcacccaaatgttgtccgtatatatgaggtgatgggaagcaagacaaagatctacattgttttagaatatgttaccggtggtgagctctttgatacaattgttaaccatggtcgtatgagggaagatgaggcaagaaggtacttccaacaattaattaatgctgttgattattgtcatagcaggggtgtgtaccacagggacttaaaaccagaaaatttactactagattcatatgggaatctgaaggtctctgattttgggctgagtgcactttctcagcaaattaaggatgatggtttgctgcacacaacctgcgggacaccaaattatgttgcaccggaggtccttgaagatcaaggatatgatggagcaatggcagatttgtggtcatgtggagttatcctgttcgttctgctagcagggtatttgccttttgaggactctaatcttatgacgttgtataagaaaatatcaaatgcagagtttacgtttccaccttggacgtcttttcctgccaagaggttgttaacaagaatccttgatccaaacccaatgacgagagtaacaattccagaaatattagaggatgagtggttcaaaaagggctacaaacgcccagagtttgacgaaaaatatgacacaacattggatgatgttgatgctgtcttcaatgactctgaagagcaccatgtgacagaaaagaaagaagaaccagaagctctcaatgcatttgaactgatttcaatgtcagcaggcctcaatcttgggaatttgtttgattcagagcaggtacgtgatctccctatttaa
More
|
|||||||
| Protein seq | MSTTKVKRRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKMVEQIKREISTMKLIKHPNVVRIYEVMGSKTKIYIVLEYVTGGELFDTIVNHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDSYGNLKVSDFGLSALSQQIKDDGLLHTTCGTPNYVAPEVLEDQGYDGAMADLWSCGVILFVLLAGYLPFEDSNLMTLYKKISNAEFTFPPWTSFPAKRLLTRILDPNPMTRVTIPEILEDEWFKKGYKRPEFDEKYDTTLDDVDAVFNDSEEHHVTEKKEEPEALNAFELISMSAGLNLGNLFDSEQVRDLPI
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_12g0002340 | OsLiXu_12g0002340.03 | Chr12 | 1686574 | 1686942 | + | IsoSeq | ||
| CDS seq | atgttcattgcatctgtaattagatgtgaatggccctgtaaactatgtttggtctccactagtgttgtaaatgctgctcttatttgtcagagaacccttgtgatagctcaagtgaagctgatcactcaatgggttttgtgtgtcaagttttgt |
|||||||
| Protein seq | MFIASVIRCEWPCKLCLVSTSVVNAALICQRTLVIAQVKLITQWVLCVKFC |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.114350 | 0.0 | 2.364814 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0132200 | RBH | 3.626610 | 2.576357 | 12.404683 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g03810 | RBH | 1.248502 | 0.519260 | 2.332800 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0132200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0002120 | RBH | 0.752089 | 27.181890 | 19.537542 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0002320 | RBH | 0.982860 | 3.887379 | 6.226997 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0002340 | RBH | 0.431132 | 27.462450 | 23.898010 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0002150 | RBH | 0.245070 | 0.357325 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0002370 | RBH | 3.368222 | 15.351996 | 36.160057 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0027800 | RBH | 8.2027035 | 3.2104885 | 36.254652 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0002380 | RBH | 0.184839 | 1.136296 | 2.920593 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0029200 | RBH | 13.483582 | 3.3085905 | 42.737423 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0002180 | RBH | 0.163834 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0002360 | RBH | 0.385352 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0002390 | RBH | 0.000000 | 8.206514 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0002260 | RBH | 1.830206 | 0.0 | 3.490984 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0002330 | RBH | 0.300218 | 3.437992 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G002240 | RBH | 0.453585 | 4.451768 | 4.692552 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0002450 | RBH | 0.000000 | 12.460645 | 13.109036 |
