Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_12g0001200 | OGI:12002680 | 15/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr12:910124-911696 | ||||||||
| Gene Symbol | WRKY64, OsWRKY64 | ||||||||||
| DNA seq | cagtacttgcaaaagggtatagataaatttaactcgtttgttgacgtgttacagatagatcagtttaattacaaaactttttcaagcccacagagcatttgtatccatttcccagttgatatccaaatctaaaggtgcatatgcagtcatgtcgaacaacaagacatcagtggtcagttcatcagcagctggcagcatgtcaagaagcttattgcaatcctcaacgacgactgatgatgaacaggtgacggagatgttgctgcactggctgctgtcaccggcgtgtgccgcagcctgcagctcgctgctgctgctgcccggactctggcaatggctgtcggtgctaatctgtgatgcttcgacgacgacatgatcatcagctgatgccgcagggcccttgcagcaggtgtgctggccgtagtagaccaccgtgtacatgacgggatgatcgccattgtagctgttggcatggtgcaggtcttctcgctgctgcaccgtctttgtagccttgcacttctcttcctgcctgtaggtgcatctatagtagctcctgctcaattcagattgatgcagatatatatattagttggtgtttatactgattagatcttgataacacgattaatcaagggtgtaattaattgaatgaaactattaattcatgaatgtctgattacataccttgggtgtttggagttgttgatgtgcttctgcccgtatttcctccattggtggccatcgtagtgtggcactggagtttcaagcgacaccgaatcaccaaacctcctgttgtttgtaattgattggagatgatacaatcagtaaaaccaagaacagaaatcgttgatgaattcaaatgtttgtgaaaccagaggactgaaaaacatgagaaatgaaatttatttacagaagtagatataatttgtaccttctcttgtgttggcgaagaggcttggcgttgtgatcctcagctgccttgctgctgctgtgatcatcatcatcagaagaagaggaaacaatcttcctgactctccttttgtcatcaagatggccatcatcatcatgcggagaatcagaagagagctgaagctgtagctcagagatggctttcctggagcagtcgaggatgccctccaacatctgagcggcgaggtcgcctcgctcgtcggagtgaagcgccggcaacacgatggcccggagctgcgtcaccagagactgccccctggctatctccctcaacgccgcccggtggtcgcagcaaacagaagaaggatgccattgatcagcaactagtggcctcttgttgctgctgttcttcatctccttgattcctaattaagatatcaagctctctgattaagatagctgctgttcttaatcggtgctagctagatagttgtggaagaattaatggaagctgattaagggagatgatcacctggctttgtggcagggtggttaatcaggtttgtcacaagtgtgtactttaatgtggctatatatatacacaattaaacgagatatgcaggatgatggtgcgtgtatgcagtgctgttcaatatggccctacaat
More
|
||||||||||
| CDS seq | atgaagaacagcagcaacaagaggccactagttgctgatcaatggcatccttcttctgtttgctgcgaccaccgggcggcgttgagggagatagccagggggcagtctctggtgacgcagctccgggccatcgtgttgccggcgcttcactccgacgagcgaggcgacctcgccgctcagatgttggagggcatcctcgactgctccaggaaagccatctctgagctacagcttcagctctcttctgattctccgcatgatgatgatggccatcttgatgacaaaaggagagtcaggaagattgtttcctcttcttctgatgatgatgatcacagcagcagcaaggcagctgaggatcacaacgccaagcctcttcgccaacacaagagaaggaggtttggtgattcggtgtcgcttgaaactccagtgccacactacgatggccaccaatggaggaaatacgggcagaagcacatcaacaactccaaacacccaaggagctactatagatgcacctacaggcaggaagagaagtgcaaggctacaaagacggtgcagcagcgagaagacctgcaccatgccaacagctacaatggcgatcatcccgtcatgtacacggtggtctactacggccagcacacctgctgcaagggccctgcggcatcagctgatgatcatgtcgtcgtcgaagcatcacagattagcaccgacagccattgccagagtccgggcagcagcagcagcgagctgcaggctgcggcacacgccggtgacagcagccagtgcagcaacatctccgtcacctgttcatcatcagtcgtcgttgaggattgcaataagcttcttgacatgctgccagctgctgatgaactgaccactgatgtcttgttgttcgacatgactgcatatgcacctttagatttggatatcaactgggaaatggatacaaatgctctgtgggcttga
More
|
||||||||||
| Protein seq | MKNSSNKRPLVADQWHPSSVCCDHRAALREIARGQSLVTQLRAIVLPALHSDERGDLAAQMLEGILDCSRKAISELQLQLSSDSPHDDDGHLDDKRRVRKIVSSSSDDDDHSSSKAAEDHNAKPLRQHKRRRFGDSVSLETPVPHYDGHQWRKYGQKHINNSKHPRSYYRCTYRQEEKCKATKTVQQREDLHHANSYNGDHPVMYTVVYYGQHTCCKGPAASADDHVVVEASQISTDSHCQSPGSSSSELQAAAHAGDSSQCSNISVTCSSSVVVEDCNKLLDMLPAADELTTDVLLFDMTAYAPLDLDINWEMDTNALWA |
||||||||||
| Function | WRKY DNA-binding transcription factor 70 [UniProtKB/Swiss-Prot:K4BIZ9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_12g0001200 | OsLiXu_12g0001200.01 | Chr12 | 910124 | 911696 | - | NAM | ||
| CDS seq | atgaagaacagcagcaacaagaggccactagttgctgatcaatggcatccttcttctgtttgctgcgaccaccgggcggcgttgagggagatagccagggggcagtctctggtgacgcagctccgggccatcgtgttgccggcgcttcactccgacgagcgaggcgacctcgccgctcagatgttggagggcatcctcgactgctccaggaaagccatctctgagctacagcttcagctctcttctgattctccgcatgatgatgatggccatcttgatgacaaaaggagagtcaggaagattgtttcctcttcttctgatgatgatgatcacagcagcagcaaggcagctgaggatcacaacgccaagcctcttcgccaacacaagagaaggaggtttggtgattcggtgtcgcttgaaactccagtgccacactacgatggccaccaatggaggaaatacgggcagaagcacatcaacaactccaaacacccaaggagctactatagatgcacctacaggcaggaagagaagtgcaaggctacaaagacggtgcagcagcgagaagacctgcaccatgccaacagctacaatggcgatcatcccgtcatgtacacggtggtctactacggccagcacacctgctgcaagggccctgcggcatcagctgatgatcatgtcgtcgtcgaagcatcacagattagcaccgacagccattgccagagtccgggcagcagcagcagcgagctgcaggctgcggcacacgccggtgacagcagccagtgcagcaacatctccgtcacctgttcatcatcagtcgtcgttgaggattgcaataagcttcttgacatgctgccagctgctgatgaactgaccactgatgtcttgttgttcgacatgactgcatatgcacctttagatttggatatcaactgggaaatggatacaaatgctctgtgggcttga
More
|
|||||||
| Protein seq | MKNSSNKRPLVADQWHPSSVCCDHRAALREIARGQSLVTQLRAIVLPALHSDERGDLAAQMLEGILDCSRKAISELQLQLSSDSPHDDDGHLDDKRRVRKIVSSSSDDDDHSSSKAAEDHNAKPLRQHKRRRFGDSVSLETPVPHYDGHQWRKYGQKHINNSKHPRSYYRCTYRQEEKCKATKTVQQREDLHHANSYNGDHPVMYTVVYYGQHTCCKGPAASADDHVVVEASQISTDSHCQSPGSSSSELQAAAHAGDSSQCSNISVTCSSSVVVEDCNKLLDMLPAADELTTDVLLFDMTAYAPLDLDINWEMDTNALWA
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_12g0001200 | OsLiXu_12g0001200.02 | Chr12 | 910124 | 911696 | - | NAM | ||
| CDS seq | atgaagaacagcagcaacaagaggccactagttgctgatcaatggcatccttcttctgtttgctgcgaccaccgggcggcgttgagggagatagccagggggcagtctctggtgacgcagctccgggccatcgtgttgccggcgcttcactccgacgagcgaggcgacctcgccgctcagatgttggagggcatcctcgactgctccaggaaagccatctctgagctacagcttcagctctcttctgattctccgcatgatgatgatggccatcttgatgacaaaaggagagtcaggaagattgtttcctcttcttctgatgatgatgatcacagcagcagcaaggcagctgaggatcacaacgccaagcctcttcgccaacacaagagaaggaggtttggtgattcggtgtcgcttgaaactccagtgccacactacgatggccaccaatggaggaaatacgggcagaagcacatcaacaactccaaacacccaaggagctactatagatgcacctacaggcaggaagagaagtgcaaggctacaaagacggtgcagcagcgagaagacctgcaccatgccaacagctacaatggcgatcatcccgtcatgtacacggtggtctactacggccagcacacctgctgcaagggccctgcggcatcagctgatgatcatgtcgtcgtcgaagcatcacagattagcaccgacagccattgccagagtccgggcagcagcagcagcgagctgcaggctgcggcacacgccggtgacagcagccagtgcagcaacatctccgtcacctgttcatcatcagtcgtcgttgaggattgcaataagcttcttgacatgctgccagctgctgatgaactgaccactgatgtcttgttgttcgacatgactgcatatgcacctttagatttggatatcaactgggaaatggatacaaatgctctgtgggcttga
More
|
|||||||
| Protein seq | MKNSSNKRPLVADQWHPSSVCCDHRAALREIARGQSLVTQLRAIVLPALHSDERGDLAAQMLEGILDCSRKAISELQLQLSSDSPHDDDGHLDDKRRVRKIVSSSSDDDDHSSSKAAEDHNAKPLRQHKRRRFGDSVSLETPVPHYDGHQWRKYGQKHINNSKHPRSYYRCTYRQEEKCKATKTVQQREDLHHANSYNGDHPVMYTVVYYGQHTCCKGPAASADDHVVVEASQISTDSHCQSPGSSSSELQAAAHAGDSSQCSNISVTCSSSVVVEDCNKLLDMLPAADELTTDVLLFDMTAYAPLDLDINWEMDTNALWA
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0116700 | RBH | 0.000000 | 0.000000 | 0.500181 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g02450 | RBH | 0.000000 | 0.0 | 0.138135 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0116700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0001060 | RBH | 0.111345 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0001270 | RBH | 0.0 | 0.901429 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0001280 | RBH | 0.217841 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0001100 | RBH | 0.034155 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0001330 | RBH | 0.000000 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0014900 | RBH | 0.582841 | 2.4623105 | 0.0586695 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0001310 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0017400 | SBH | 0.2433095 | 1.0628095 | 0.0094585 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0001080 | RBH | 0.054329 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0001370 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0001340 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0001210 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0002110 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G002020 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0002240 | RBH | 0.0 | 0.0 | 0.0 |
