Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsLiXu_11g0020920 | OGI:11072070 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr11:28352986-28354488 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | tcacttggcgaagagcacgtccatgtcctccaagctccgccccctcgtctccggcagccgcacgtacacgaacacgcacgccaccgccgccacgccggcgtagaggaagaagcacccggccatggtgatcccgccggcgagcgagatgaaagtcatgctcaccacgccgcacgtcagccggttcacggccatgccgaggctcgcgccctgcgcgcgcagccgcagcggcatgatctcggcggtgtacgtcgccgtcatcggcccgaacccgacggagaacgccgccacgaacgccatcacggacgccacgcacgccgcggcgctcgccgtggacggcgacgcgacgcggagggcgagggcgagcgaggtgagggtgacggccacgccgccggtgctggcgagcaggagcgggcggcggccgaggcggtcggagaggagcgtggcgacgaggatgaagcacgtcttgacgacgccgacggcgaccgtggcgcccaggacggaggtgttcgacgccatgcctgccttcttgaacaccagcgggctgtacagcacgatggcgtcgatgccggacgcttgctggaagaagtggaggccgacaacgcaggtgacgatccgccggaccatcgccgacggccgcaggaggagctcccgccacacgccgacgccggcggactcctgcggcgcctcgacggctcgcttgatctcctcgaggcggagctcggcctcctcgacggagtcggaggtgcgcacgagcaccgcgcgcgcgtcggcgtggcgaccgcgcatggcgagccagcgcggcgactccggcatggcgagcacgcccgcggcgaggaacaccggcgggagcacgccgatgccgtacatgacgcgccacccgacgtgcaccggcaatccagccaacgcgtagttcgacacgtagctcagcaagatcccgacgttgacgaacatctgacacacgcaagcggagcatcgatcagagcgacccaaatcaaacactactagagctatgatgcgagcgttacatcgagcagcgaggagaggacgccgcgggcggaggccggcgagatctcggcgttgtacacgggcgcgacgacgagggagaagccgacgccgacgctggtgacgaagcgcgcggccatgagcgcggcgtaggtggcgccgagcgacatggcgagcgcgccggccatgaggtacgcgttcgccagcacgagcgtgccgcggcggccgagcacgtcggccgcccagccggcggcgaggatggacacgagcatgaacacgttcatcgacccggcgagcacctcgatctgcgcgtcgctcagccccacgtcctcccggacgaacagctgcgcgccgctcatcagcgcgagatctgcaaagcacacgaaacacgatgagcttgctccattgatgcgtgcgtcgtgctcaagaacttgcacacgtactgtagcccatgaggatggtggtcatggaggcgagggtggcgcagccgaaggcgtacat
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CDS seq | atgtacgccttcggctgcgccaccctcgcctccatgaccaccatcctcatgggctacaatctcgcgctgatgagcggcgcgcagctgttcgtccgggaggacgtggggctgagcgacgcgcagatcgaggtgctcgccgggtcgatgaacgtgttcatgctcgtgtccatcctcgccgccggctgggcggccgacgtgctcggccgccgcggcacgctcgtgctggcgaacgcgtacctcatggccggcgcgctcgccatgtcgctcggcgccacctacgccgcgctcatggccgcgcgcttcgtcaccagcgtcggcgtcggcttctccctcgtcgtcgcgcccgtgtacaacgccgagatctcgccggcctccgcccgcggcgtcctctcctcgctgctcgatatgttcgtcaacgtcgggatcttgctgagctacgtgtcgaactacgcgttggctggattgccggtgcacgtcgggtggcgcgtcatgtacggcatcggcgtgctcccgccggtgttcctcgccgcgggcgtgctcgccatgccggagtcgccgcgctggctcgccatgcgcggtcgccacgccgacgcgcgcgcggtgctcgtgcgcacctccgactccgtcgaggaggccgagctccgcctcgaggagatcaagcgagccgtcgaggcgccgcaggagtccgccggcgtcggcgtgtggcgggagctcctcctgcggccgtcggcgatggtccggcggatcgtcacctgcgttgtcggcctccacttcttccagcaagcgtccggcatcgacgccatcgtgctgtacagcccgctggtgttcaagaaggcaggcatggcgtcgaacacctccgtcctgggcgccacggtcgccgtcggcgtcgtcaagacgtgcttcatcctcgtcgccacgctcctctccgaccgcctcggccgccgcccgctcctgctcgccagcaccggcggcgtggccgtcaccctcacctcgctcgccctcgccctccgcgtcgcgtcgccgtccacggcgagcgccgcggcgtgcgtggcgtccgtgatggcgttcgtggcggcgttctccgtcgggttcgggccgatgacggcgacgtacaccgccgagatcatgccgctgcggctgcgcgcgcagggcgcgagcctcggcatggccgtgaaccggctgacgtgcggcgtggtgagcatgactttcatctcgctcgccggcgggatcaccatggccgggtgcttcttcctctacgccggcgtggcggcggtggcgtgcgtgttcgtgtacgtgcggctgccggagacgagggggcggagcttggaggacatggacgtgctcttcgccaagtga
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Protein seq | MYAFGCATLASMTTILMGYNLALMSGAQLFVREDVGLSDAQIEVLAGSMNVFMLVSILAAGWAADVLGRRGTLVLANAYLMAGALAMSLGATYAALMAARFVTSVGVGFSLVVAPVYNAEISPASARGVLSSLLDMFVNVGILLSYVSNYALAGLPVHVGWRVMYGIGVLPPVFLAAGVLAMPESPRWLAMRGRHADARAVLVRTSDSVEEAELRLEEIKRAVEAPQESAGVGVWRELLLRPSAMVRRIVTCVVGLHFFQQASGIDAIVLYSPLVFKKAGMASNTSVLGATVAVGVVKTCFILVATLLSDRLGRRPLLLASTGGVAVTLTSLALALRVASPSTASAAACVASVMAFVAAFSVGFGPMTATYTAEIMPLRLRAQGASLGMAVNRLTCGVVSMTFISLAGGITMAGCFFLYAGVAAVACVFVYVRLPETRGRSLEDMDVLFAK |
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Function | Polyol transporter 5 [UniProtKB/Swiss-Prot:Q8VZ80] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLiXu_11g0020920 | OsLiXu_11g0020920.01 | Chr11 | 28352986 | 28354488 | - | NAM | ||
CDS seq | atgtacgccttcggctgcgccaccctcgcctccatgaccaccatcctcatgggctacaatctcgcgctgatgagcggcgcgcagctgttcgtccgggaggacgtggggctgagcgacgcgcagatcgaggtgctcgccgggtcgatgaacgtgttcatgctcgtgtccatcctcgccgccggctgggcggccgacgtgctcggccgccgcggcacgctcgtgctggcgaacgcgtacctcatggccggcgcgctcgccatgtcgctcggcgccacctacgccgcgctcatggccgcgcgcttcgtcaccagcgtcggcgtcggcttctccctcgtcgtcgcgcccgtgtacaacgccgagatctcgccggcctccgcccgcggcgtcctctcctcgctgctcgatatgttcgtcaacgtcgggatcttgctgagctacgtgtcgaactacgcgttggctggattgccggtgcacgtcgggtggcgcgtcatgtacggcatcggcgtgctcccgccggtgttcctcgccgcgggcgtgctcgccatgccggagtcgccgcgctggctcgccatgcgcggtcgccacgccgacgcgcgcgcggtgctcgtgcgcacctccgactccgtcgaggaggccgagctccgcctcgaggagatcaagcgagccgtcgaggcgccgcaggagtccgccggcgtcggcgtgtggcgggagctcctcctgcggccgtcggcgatggtccggcggatcgtcacctgcgttgtcggcctccacttcttccagcaagcgtccggcatcgacgccatcgtgctgtacagcccgctggtgttcaagaaggcaggcatggcgtcgaacacctccgtcctgggcgccacggtcgccgtcggcgtcgtcaagacgtgcttcatcctcgtcgccacgctcctctccgaccgcctcggccgccgcccgctcctgctcgccagcaccggcggcgtggccgtcaccctcacctcgctcgccctcgccctccgcgtcgcgtcgccgtccacggcgagcgccgcggcgtgcgtggcgtccgtgatggcgttcgtggcggcgttctccgtcgggttcgggccgatgacggcgacgtacaccgccgagatcatgccgctgcggctgcgcgcgcagggcgcgagcctcggcatggccgtgaaccggctgacgtgcggcgtggtgagcatgactttcatctcgctcgccggcgggatcaccatggccgggtgcttcttcctctacgccggcgtggcggcggtggcgtgcgtgttcgtgtacgtgcggctgccggagacgagggggcggagcttggaggacatggacgtgctcttcgccaagtga
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Protein seq | MYAFGCATLASMTTILMGYNLALMSGAQLFVREDVGLSDAQIEVLAGSMNVFMLVSILAAGWAADVLGRRGTLVLANAYLMAGALAMSLGATYAALMAARFVTSVGVGFSLVVAPVYNAEISPASARGVLSSLLDMFVNVGILLSYVSNYALAGLPVHVGWRVMYGIGVLPPVFLAAGVLAMPESPRWLAMRGRHADARAVLVRTSDSVEEAELRLEEIKRAVEAPQESAGVGVWRELLLRPSAMVRRIVTCVVGLHFFQQASGIDAIVLYSPLVFKKAGMASNTSVLGATVAVGVVKTCFILVATLLSDRLGRRPLLLASTGGVAVTLTSLALALRVASPSTASAAACVASVMAFVAAFSVGFGPMTATYTAEIMPLRLRAQGASLGMAVNRLTCGVVSMTFISLAGGITMAGCFFLYAGVAAVACVFVYVRLPETRGRSLEDMDVLFAK
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0637200 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g41850 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os11g0637200 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0021370 | RBH | 0.0 | 0.0 | 0.000000 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0021310 | RBH | 0.0 | 0.202935 | 0.000000 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0021240 | RBH | 0.0 | 0.0 | 0.000000 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0020690 | SBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0021220 | SBH | 0.0 | 1.675495 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0379500 | SBH | 0.1081065 | 0.238486 | 0 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0021670 | RBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0399100 | RBH | 0.0397815 | 0.2652545 | 0 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0021570 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0021700 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0021310 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0020910 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0021070 | RBH | 0.0 | 0.000000 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G021050 | RBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0021600 | RBH | 0.0 | 0.0 | 0.0 |