Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_11g0017800 | OGI:11063100 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr11:24798660-24814436 | ||||||||
| Gene Symbol | UBP5-3, OsUBP5-3, OsUBP21, UBP21 | ||||||||||
| DNA seq | caatgatatttcatatttgtttctcgaaagaaatcgggatatttcatatttctggtgaattacatcatatccacgcttacatcagctattactatcacggaacccagcgccgcactaactgcggcagtaattctggttaatttttctgcgaaaggaagataaaattgagccatacagcaagattggtatgatgttttccattgttacatccacacaaagacaagaagtcgatatcaagtcagaactataccctgtatacatatgcccccctaccaaaatcttatgtaccgaaactttgctctaaaaatgaagcaacatctaccctaagggggcattcacacccaacttaaggaaattcaatagcacgcaccattgccccaaagcatggtggaaaatcatgaaaaatttgtcaccatgaacaatgaaatcaagtgcacttctgcatccaaacagcaccggtagaaaggaatagaggccacggcacccaaatggccaaaacttgttgctgcttttccctgttcgagtttaacttctccatactacatctctctgttgctgctttcagatttgacaccaccaaggggccagcacagtcagaagtgatttcaattgtaaattctcactggcttctcataggtgtgacggttctgcacattagttgaaaccagaaacaaaaaaggaagaatcaaaatttcgttaagatgaggtccttgcaaccatagcaatgtgcatataaaagaaaagagcattggaatgctacagtacagtgcagaaaaatgtatgtgaagtgcaaagatgtttgcggggaaacccaaagttaactacaagatctttcttccgtagcagcaaagccatctcaaagttgtgtataaggatactgtaaacacctaaatgcctaaatataaattgctcagcatgtactccctccatcccacaaaaagaccattcctagcatcccaaggtaaaattagtggagagtaaaaatgaccaaaatgcccctcattattggaaaaggtagtaatggtgataggtaggtagagggtatttaagggataaaacttctcgttttatgtgctgaggataggtaggatggtagaagttggttttttttttgacaaaattcaaactccagaagttttttttgggacggagtcacggagtaataaaattccggattattggtttcatgtataactaagagggattaaaacagaattctctaaaacatcaggcgagcccaaatattttgaaagatcatttgatgaaagtttaaaaagattgcaagaaataccacggtgtaaaccagctgaagtgcaggtagcaagataaacgaagtatagcatagatatgcccaagccgagtgacagaatgaaggtaaaagaaacaggcacaagaattcgctatgctcgcttcacaagttcacaaccagacagcagcatacctgattggctgtataggccctttttggtgcagtatcagcatgctccagaccaagatactgctcccaggctccatagacatctctcctctgaagaaatcagaacagaaaactttgtaaatcatagaacacaacaaatttatgggcacaactagagaagcctgtagggaacaaacaataatttacctggaaacgggcagatacaacatctgaatcttggaggtaatctggccggttcatggatatgaaagcgaatttccactgaccatatagcattaaaaagtatattagtttagtgtctgtgtctgcatcacatagtggcacgtaatgaaactcaaggtaaaaggcagagaatgcaacaaagagattctcatcagaatatacatgttagtttatttcttttctttcacccacatagattagatttggctcacgtaacacacatggctaaccattctataagagataatgagcacgacagtgataagtctatcataaatggccactgtttttgagaattactgagaaaattttagactgcagtataatatgagaactcttagctccctacagtaaaagaaaccactagactggtatacttcaaaactctgaatctgacttatatatcagcataatcgcaaggtggacaaggataaagagcaagccaaaacatgttataattccacgctttcataagaaacttcaacagatggatcaccttgcagaattcctcatcagggacttggagttttttctgtatgcgctcctttacttctgctaaagtctcaccttcacggatagcaagataaaaaggatctccaaagttctgaatctgctgctagtcatcacagcagtattaatggaatgttcagcatattttgtaagtagccaactcccaatacaactcaattagacaagaatgaagatcatatcgaagtgcactacctgattctgaagagggtctttcatgaagtgataaacatgaattaaccgatcatttggaccgagatttttctcctcctctggaatctgtaccaataagcagaagcagatatgaggatagaatgaaggcgcacattttgacacaagcaggaaatgaaatagattgcaactttacagttcacgaaatggagcaccaaatgcaaccaaaaagaacattacatacctcctcagcacgtagtgtccagtactgatcattaatattctctatcttctcatggagtggaaaaatctatggaaaaactataattagtaacagccatgccataaattataaacagatgttttttaaaaaaaaaaaacaaaagggaattcatcaggacatatggtattttatatctcttgaaggctgaaagctaatgtacaagtaccttatatatcttgtggtaaaagacctctaacaagcgcaattcagcactgggactggatagttcaacctgatgattagtgacgtaattagaaattttacataaaaacaaacacatggagagacataacaagccggtttacacagcataacttggtaataccaatgaaaataattgaaacattccatctcatttaagatagatgacaggttagtgagagtacaataagctgacatcaggttattaagtatggccagatttgcttaaccaaccaagactagtacaaaaagcatatggataggaggtttcacagtacttttcacagtaagtatgttgaaacagtcatgcagtcacatggaaattgaatatgcagctcaacaacgagctatatattagtatcaatgcttaacacctagttgtacttatatagagtatttacacgttaacagaacatggattaaatgaaccaagttatatcttcattttgcatcacaatttggaaacctggagagtcaactatccctatgcaaaaccactcttaaaaagttagtatccatttctcccttacctctaaaggagattagaagtgcaccctaaaaagaatgcatgtgaatatatccaagtcatgcattggtgtatctcagaccaaatagagtgtaaaactggagagcaagactaaataacttgtaataaagaatgaaaggataacaaagaaagaacctttgttttcaaatcattaatcacgtctgcaatggtgctattctttggaagcctgatactgtgaatcacaacctagaaaaaaaggatgtttcatgaatatatgcacttggtagctgaagataaataaagatgtattgtttgcagctaataacctcatcctttgtagcatggtggaatgcaactttcagggttttcaggccctgcaattctggcagtggaatatccaacacctcataatacaatatgtctgatgtctgcaccagatagtataaatccctttgtattttagctatgcagaaaaactatgctaactgacccaaaaaaaaaacaaaaagaggtgaaaggttaacctgattataatgaatgagcatgtccaaaagatgctccactccccgatatctgataggttgcggtttaggctgctgcgaatagcagttatgggatgttagacgaattttcgctggatcatccacaccaagctgacgggcaactctctcaacaacatcatcataggtatgaagttttgaccttaaagaatggggaagaaattaacgttacacatacatgctagataattagtcaattaaacagtttgaacccaataggttttgtagtcactcacaattccaaagaaaagtcatcatcctttggtttctccaataaccgaaagtgcacaacctgcagtaaacaaaatttacatagataaagcaagtggcatcatcattaaaaaggtagacccactataatattacatgagcatgaaaaaccaaaattaaacaagcatctaacatatgataacagaagattagaagggggtgaatgaaagcaagagaaatttccttttgaaccacagaatgcaaaagcacatagcattataagcatactactataaaaggagctagagcctagaggtgattgagctcatggtcatcccctcacacacaagaacttgtgtgactaatataggcatatgtcgattggaatatcagttatgacaatatgcatagtgtgcacgtctataggttgttgattgatctaatgcaatcattttaacattttttaagttttgaagttaattattttgtttacatttcaactttataaaagtttgaatagcataatatattactgtatttgttttgacatccattgcaatgtggctgccatgttcatagcacataagtaatcttccatttcagtcatgatgcatttcaagcgtccatagcacatgcttcaatcaatggaaattagtataatggccccatactgtagagcacagccatcttaaccgcggaagctaaaaatatcagaccagactagcctggtaaagtggtatgagataagattactgccatgttcacagtggatgttgatctagtacataaactctaggactacaccgtagaacaattcaggtagtggaatgggctcggaaaaaaattgtcattcaaccaggatcaggcagaaccctcttctacaacctaaacacgactttctaggaggacagccccagccttctatttctttcacactgcaactaccttcccctctctctctctctctctctctctctccaccaactgattggcaacagcatgttggcaagcaagggcaacgtgatggtggacagtaaactaacatggtggcatggtcagtgtagtgcaatcactagctgagatcaaccagatctagccaggttgccagtgaggaaagtgcagatctgggctcccagtagccactggacactaaacctgcaccaaattcagtattgcctcacctaactcctccataagacccagattaaccttttttaatggagcacaagagcccagtgtaggtgctggccttgccaccacagaagttctggtatgaagcagtcgcatcacagttccacctagaacattgactaggcctcctagaaaggcacaaggaggggtagggaggagattcagacagacaaaacaagggacggattcagggcgagaattgaggcagattcaggggaaaagaagagaggcaaatttaccattgcaattgccgtcttctgctcctccaagctccatctagacatctcccagatcgtcactgctggcagacccgttactatgaatctatgactatcagagggtgagaggggaggcgcggagagcaagagaggaatgaagcagagagaataatagatgaggtggtgtggccttagggggtcatacatcccctctgttagccacaggtgcattgggctgcccgtcgcttcttagctttatctctttctttttgttctttcccttttcattttctaattgcactgccacttttccgcatcatagccacatctgccaccatcatcacctcttcttcccttccacatccccgggtttgtttggcaaacaaagaaacccttctaatcgcttcagataggtttggactgatggggatatagatattccctcatatccaaacaaacctaaggatataggctgagatccatccctctctctcgaaacagcaactctcccaaatgccacccttcatcatcattgtttggataggaagagattagacccaattccttcagatagtgggaactttaattccatttatagcccatccaaaggcattaagcctaagccccaccaattcaaacaagcctttccatcagttaaaatggtaagaagtgggaccatctaaccacccatcgcggcttcctgcacccaccaaccaaccaaccaaccaacatgttttagtaacccccagctcgtaaattccaattctcttctaccaatttcctcgagccaaaaaagccaagaaggtgatgtacaagccagagaaaaaaaaggcagacaactagatgacttaatctgggtgaagaggacatagaaccacaaacacaagtacatcaaaaatattaatagaagcaactatagagtagcagcataaatagatagtatacaattagcttacagacaagaaataaacaccttgtacctacagtacaaagaattggaatcaagttgggaaatataagcaccatacctgcctattatgaacatactccagatatgaagggacatctggataacgcatttgagtgtcactatcaggtataggtgatttttggaaacagatgatgtccccatcttcaagctacaatatttggagcattttgcaaatcaataagtgtttaattcaaatttggcattccttaaccaaaagaaacatgttataaacctgactagcacggaaagtggcttttttgtcaatatgttcacacatcacatttggctcaaatttaatttcctgcatgtaccaatgaaacacaacataagtacagtcaacttggtaaggcagtcgatataaaacttagcaattgccactccaaagattgacacttaataatttgccactgaacgccagacagacatctggacctactcctagaacacgcctcaatggagtgacatatactagattatcccataaatatagcatcatgaatttagctcttgcctcgtagagctcaacttcttcatttggcacaaatccagccatttcatttagtttggtcaagatttctgagggttttcccaaggcctttacgaagagcctccccacaaaactgcaatcagtgaaagaatgtcatgcgtcagccatttctgaaggaataaggaagaatgataaggtgttaatcaaataaatgtaccagagttcttccttttcgggattatagagtttgaagaacagaagaatatcttccttgctcttctcaggtggagggagaggccgcaaatcctataaatgataaaacagacaacaataagtatcctgcataacattaagtatcaaacagataaacaaagttaagtatcctgcatctagaagccataacagacaacaataagtaaaatacagaaaaagaaatggtagcagctccagcacatcattaccgggccaagttctacttccaaaaacaacttcagctcagcattgtgtgccttattcgatacctccctcagttgtcccacctgtgcagatacatataaaaatgaactggagatgataagaaagagaacagaagcaataaacacacaatggaaacaagcaagctcattgaaagaaaaaacgtataagctaagtgcatgatcttctgataacatgcataacaaagcactctcagcagagaatctatacaacaaaatactccagaactgcaacctatataaaagaaaattcttaagtggggagtgagagaaagagagacaggggaagatcgtaagaactcaattggacctaaggctgttagatgaaataataaggtaagattaatttccaattgaagtgtgggtttaacagtttgcttccaacaattgaaagtgactagcttacagattgtgtttcttcatgaggactcaatggacgattaggcctgtatgtgtggttctgcctcttagcccacaaccagaagcgctgaaattgtacagggatgccatactcctttgcaacttcctcctattaaacaatttattcaacagaagttaaattaccagttgattttacagaagcatgtgtactcgtatagcagaaatttagcattccaatgctacgaaccaagaacttgtttgcacaccttaccttgaaagtggtaaacggtaactgcttctgaattcggaagctacgaactttttcatggtccaccaggtcaaaatatatatccttgccaatttgctccttcaaattctcatctcgagccacctagatatatttgtccaaacagagcactatgagaaacagattcacagagaggttccagactgagatgaagtgatgaacataatagtagtcagatgctgacctttatgatggtataaagatgagcttcagccttctctttctttttgtgttctttctcttcttgttctttcttcaaccttacctgaaaatccacagtttatcatccaaactgtatcagaagtccatgacattaaaagggagaaaaccaggaaataacatcgtaaagatatgcagattgcaaaatatcaccacatatgagaatgacacatggggcctgggcccacgtgtgttgacacatgcgatggtattttccaatcgtggtatcgaggaaattggcccaagaaggagtgagaatgcaaaacaacacatacccttaaatgctcagcaatgtccttctcatcaacattacacattattttgtccttatcactctcacggatgtagacaagcatgtaggcatttgaatactttgtgaatttaaatggagcgttgttgaaaccaggatttatttgaggcaactgttcagcccaaaagagattaaaattacggaaacaggaaaacaaacatatgtagttcaatatctcatatcattcaatatcaattatcaggtagaacatacctcttcctcacccccgtattgctcttcaagggccttcttagtatcttctttagttacacgctcatcatcaaatttatacctggtagacgggataacattttcaaaaatctataatgaattgggaactgtttgctaggatgtaaaattcaacagcatagttccacaaaaggcataatcattgtagaattaattataatgcgaggatattgcacttgtttccaggttcttcaacagaaatttgcatgacgtagcactaaacctaagaagatttattggcaacttatttgatgcctaatatatggtattcagctggtctatatgcaagttacctatattgttgcagcgtggttactccctagactggcatccacttacaataaaagtgcataaggcatatgattttcctcctgtaatctcacaccacatacttcttttgataagtgataactgatgaccatcagcttgaaagaagttattgaagtccatgctagtcaggtgcttattagagccaacacagaatcctataaccaactatattatgaaaaagtaacatgttgaacttgacatgagggccttctgtccagttaagagaacttatgtaaatttgttagtgtaaaaacgtcccactaacattggctaactctagttgagatatgatattctcttgtatagaaacaaacactctaatgtttttttggaaatctgcctcggaaatgctgcaatccaatagttacaggtcctaacaagatagtttcagttgtcgaatagagtgccagggagttgtctcggagaacacatctattcagctatcatcaagtggccatgcataggaacagggtaataatattatctggtaaatggcaaatagttgaataattgtattgttgtagtactagagacaaaaaaaaaaagtcaaagaaaaaccaaccattgatctgatagcgttggtcgaatgaaggcatagtagtgaccgccatgtactcctccactatgaacaagaacactgaataaaagcagcagtaaaacatagtgagaaaaagatgtggaaaggaggaacaaaggcacctattggagcaccactgttacactgaaaatggtacctaagaaaccattacacaaaaataacaaatggtatttgcttgatcccaggtctcatcaaaactgaattttctaagatacataaaaccctgttattccataactctaaaaccaatatggaatacaatgactgctaagagaatggcaagtgatgtggaattctcaggaattgactcagtcattatgcatgaagattcgtgcaggtatatacttgtatagcgcattatatcagcccattttatactatcaaccaattcttcctccaagttttttgtccacagacggacagcagctagtagtctacccccatgctcatacatagcatgtagataaaagaaacaggtattattactaacgaacccactgatactttggtttccctaactaccataatgaactattaggacgtgtgatggagaaattaattgatcttaaaaccattaaagtaagttgtgaatgacatactcataaaaaacactacctgtgaagagcataaaggtttcttatacttctatctgcatctggagcaagatattttccatcatctctatccaaatcaagttgcaaagggaattcatagcggtcattaatctgcacagataggcataatagcagaaatcccaagctcagaaccggaacgtaaacctttaaagtatttgaacagcagagatattaaagaggctagtcggctacatgcttctcaattctcaagaagtgatccaaacgtttgatccacttaatgtttcttgaattaatgttgcgttagctgtcttttgaaatcatttatggcagggaaaattgaaggaaatgatggctcagtgttaactgtctaaccaaggaaaagcagatgagacagaagttacagggaaacaaaatggaacataagataatcacctaagatgtctcaccttattattatgaagctaccagtcatattggaagaaaacatattgcagctctaaagtaactgttagaattcctaaaccaaaaagcaaaaggaaacttttctttactattcaagcccaaaatattttctcatcccttattgagaattagtatgtgacactggaatagatgtctgccatactagatgaaaccccacgcgttgctgtgggaattttgtataataatagtagataatatgtggcatagctagacaatataattttataatactttacataattttcatctttgaccgaccattgaagaaaaagctacaaacaatttaagatgacatggtttataacaatttaaattatatatagattaatcatccaacagcaaaactaaggtgatgtggctcaatgaggtaagggagataatatagattaatcattcaaagataaaactaaggtgataagacttcgtaagagaagaaaaggaggaacataatttggaccatagatcaatcatctaagagctagaaagaattgaggtgatgtggcttaacgagaggagagaaatagcattaactacacttagtggggataaactttatagatatataggataagggatgcatgtcagaagtctcaaagtgagagtacaaccatgaattatggtggtcctgtgcacaagcaattatcataaaagatggcccaatcaatttggataataaataagaaacaaaacaggcaagcttttggtgggcaataccaatatgtgatactatgactctccagatttataacaggagatgcacagcatttggaattggatctcgccaagttaaaaaattatttgcattggtgtacttatgccttttaggaattaagatcatgcatcaagaaagcgaacaactcatcagatccacagagtatctgtatgttgggttgtcaacttgtcatataactttgggatgggcaatctatttgagttttgagatcaaccaacaccaaggtcaagctcaaatcattgtgcacacagccacacactcaaggttggtcaagttaagatcaattaggctcgagagaacatacatatataatactacctccgtcccataatagttgtcgctttaactttttccttgcaacatttgaccattcattttatttgaaaaaattagtgcaaatataaaaaaggataagtcatacttaaagtacttttgataataaagcaaatcacaaaggaaataaataataattccaaattttttttgaataagacgaatgatcaaacattataaaagaaaactcaaagcgacaagtaatatgggacggcggtagtatagtatagcataatagcatactacgttaaccataaatagttttaaataaagatgttaagttgttaacatgtttacagcaatcattagtcattttcataatttctaagtatttcatatttttttcccaattgcgttgtatgttctccaaatgtaaaaataaaatcaagcctccaagggtgtcattttgcacagcaggtcttgcattcacatgacaacataaataatagaggtaaatggatggagaatataaatggcaaggttatggcagtcccaaccttaaccatggtatctctcatataatcgtactcaaaacgcttcagttgaagttgcaaaactggggggaaatcaaggaacagaacaccctttttcgcatcctgagacaatatcaaaaaaacatagtcaagaattggcaccaaaaccaataaaaatgggcttcatttataaaatatagatggagcaagctgttatagtatatgggatgcagattccctttatcttcatagatacataaaagtccacaagttctatcaaacctttatgaaacaaccaactctagcttcagtttcaaagcttaaagtgagaactgagaagaacatgtgggtacctgtaaaccatgattctctgcatgatacttattatcaccttcgaggcgctcaacttcaacatatttatcaaacgatgcatacacatcacgacaacctttaacatcaagttgaaggtctgcatggccataatacagcattaacttgacaataaataatgaaacacatctaatgtgaacccataatctggtaccaggacaaaacctaccataaaaggactccttcctgttggatttatagtcaacatttatacactctatataattgatgtggtgaccttcgaataacttttcaatcgttccctctacgacagttctctaggaagaaagcaaagttaatagcagccaacatgcagcatatatacagctctataccagatttgtcaccttcatcttatcttcaagtttctcacagagaactctgttgagctcttgtacatcatgttgcatgaaggaatcatatgtgtcccatccaaaagatttggtcagctctttggtggctacactattgtcactatactggagcttgtagaaaaggctctgcaatgccaacggaatactcccagatggcatatcattttcggtggttggcatatgatacacagcctgggtaaaataatgaagttagtcaattagttctggaaacaatagtctagaatgctctgaattatgatgcatgatctcacaccttcctgaagtatggtatatggtatagtgtctgtagtagagagttcatgtaacaggtagctccttggttcttcaggccaacgtaacctgtttctttttttgaatcatatgtccaataatcaaccattttgcggacagcaacctcagcctccacaacaacagtatcatcgacaaggtatcctctacttggatcatagagctcactcaaaggcataaaagatgtgaaaccccaatcactctcacgtgcattaaattgatgctgagtatctgccagacagagaatcacaggtccatcagtgatagatttatcccatacaaatcactgaaatccgcagaccaacgtaaagtaggtctactcagcatcatttgatcaagtagcagtatgcctccttaactagctaagagaactcaaaataccaaagaaaacaatgaggcctagcatttgcaagcatggggccacacaactccgagatcatctaacgactctattataaggaatgaagcaaaagtatatacaggaagtaaaagtggccttataaaacagaaaagcctagaagaagcaaagcacaaatacaaatataacactcttgagtctgagaggagtttcatgttcaagaaatataaagaacctctttttctacactaggggaacctggccttggagaagtgagagctcttgcaaatagaaatgttaatcatggtcattgccaatctgagcttggataaaagacccaaactgcgaaggagaagagtacagtagaaccttcagctgtctagcgggtccatttaaacaaccatatccttttgtggttcatcatgatatagtgatgtgtaagtgtaacagaggaacaatttgattcaaccaaatcattgaacagaaaactatagtgtacccatcaggatattccgtgcaagcatgccaacaagaccaaacaaggtgctcgataacgcaagattataaaggttgacaaggaaatagaaccattttcaaaatagaaccattttcaaacatatggcatcccttcacttgatgaaagcacgacctctgacctcaagaggagcaagtttttgaatactacgccgtgataacagtttgacaactagtgaaacgtagcaaagtatagcatcatcatactctcaagcttatcatgcattgcttttgcattttaagtgtattcacataaggagttgtaaacatcatgatggaggaccataacctttgcgtatcgtatacttctgttggatctggttgacaacggccaagctaaactgagcatatcggctccaaccatatgggaggttagcagagtcggcaacatccaagtacatggagaaatggtccacgttgttccccttagggaaaatgagcacacgcctgcatgaaagcccgccaaacattactatcatccaaacattcaaaaagaaaactaactccattaactaccctttttatgagaccaggagctcaccatttgtacccgccaacgacaaacgcatccgagtagtgcttcttcgcattgatccgggtgaagttctcgatcgtccacgtgaaccgcgacgtctgcgggtcctcagctggctggctctccgccgtgctagctgcctccgtttgcgcaaccactgctaccacaaaccacgagcatatattactaccaacccacaaacactcccaacaccacacattacaaaaccacgctgtacaaatcacacgggagcaaagcaaagcagcacagtgaacccccatagagagcaatcaacatagcaccttccatgggctgggcggcgtcagcagcgacgagctcctggtgaggcacgagcatctcgtcctcctccggctgcgcaaataacatatcgacaaaaaaaaaaaaacccggaaaggggggtcagatccagcgcggaggcataaaccctagcaaaaaagcggcaccacccgatcggacgcccaccgcgcgggccaccggagaacggtgcagccctagcgagggagatcgggcgagtagacaggactcaggagagctctctctctctctctctctctctatctctctatcgcgcgcgcggagaggcggttgcttacctcgagcgggggaggcgtcatcatagtcatggaggggggcgcctgcaggtcgtcggcgtcggtgagagcggtgacgtacggcctccgcggcggctgcggtggagaggagagcagcgggtggaggtggaagtggcgagtcgggggcggag
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| CDS seq | atgactatgatgacgcctcccccgctcgagccggaggaggacgagatgctcgtgcctcaccaggagctcgtcgctgctgacgccgcccagcccatggaagtggttgcgcaaacggaggcagctagcacggcggagagccagccagctgaggacccgcagacgtcgcggttcacgtggacgatcgagaacttcacccggatcaatgcgaagaagcactactcggatgcgtttgtcgttggcgggtacaaatggcgtgtgctcattttccctaaggggaacaacgtggaccatttctccatgtacttggatgttgccgactctgctaacctcccatatggttggagccgatatgctcagtttagcttggccgttgtcaaccagatccaacagaagtatacgatacgcaaagatactcagcatcaatttaatgcacgtgagagtgattggggtttcacatcttttatgcctttgagtgagctctatgatccaagtagaggataccttgtcgatgatactgttgttgtggaggctgaggttgctgtccgcaaaatggttgattattggacatatgattcaaaaaaagaaacaggttacgttggcctgaagaaccaaggagctacctgttacatgaactctctactacagacactataccatataccatacttcaggaaggctgtgtatcatatgccaaccaccgaaaatgatatgccatctgggagtattccgttggcattgcagagccttttctacaagctccagtatagtgacaatagtgtagccaccaaagagctgaccaaatcttttggatgggacacatatgattccttcatgcaacatgatgtacaagagctcaacagagttctctgtgagaaacttgaagataagatgaaggtgacaaatctgagaactgtcgtagagggaacgattgaaaagttattcgaaggtcaccacatcaattatatagagtgtataaatgttgactataaatccaacaggaaggagtccttttatgaccttcaacttgatgttaaaggttgtcgtgatgtgtatgcatcgtttgataaatatgttgaagttgagcgcctcgaaggtgataataagtatcatgcagagaatcatggtttacaggatgcgaaaaagggtgttctgttccttgatttccccccagttttgcaacttcaactgaagcgttttgagtacgattatatgagagataccatggttaagattaatgaccgctatgaattccctttgcaacttgatttggatagagatgatggaaaatatcttgctccagatgcagatagaagtataagaaacctttatgctcttcacaggtataaatttgatgatgagcgtgtaactaaagaagatactaagaaggcccttgaagagcaatacgggggtgaggaagaggtggctcgagatgagaatttgaaggagcaaattggcaaggatatatattttgacctggtggaccatgaaaaagttcgtagcttccgaattcagaagcagttaccgtttaccactttcaaggaggaagttgcaaaggagtatggcatccctgtacaatttcagcgcttctggttgtgggctaagaggcagaaccacacatacaggcctaatcgtccattgagtcctcatgaagaaacacaatctgtgggacaactgagggaggtatcgaataaggcacacaatgctgagctgaagttgtttttggaagtagaacttggcccggatttgcggcctctccctccacctgagaagagcaaggaagatattcttctgttcttcaaactctataatcccgaaaaggaagaactctgttttgtggggaggctcttcgtaaaggccttgggaaaaccctcagaaatcttgaccaaactaaatgaaatggctggatttgtgccaaatgaagaagttgagctctacgaggcaagagctaaattcatgatgctatatttatgggataatctagtatatgtcactccattgaggcgtgttctaggacttgaagatggggacatcatctgtttccaaaaatcacctatacctgatagtgacactcaaatgcgttatccagatgtcccttcatatctggagtatgttcataataggcaggtacaaggtgtttatttcttgtctgttgtgcactttcggttattggagaaaccaaaggatgatgacttttctttggaattgtcaaaacttcatacctatgatgatgttgttgagagagttgcccgtcagcttggtgtggatgatccagcgaaaattcgtctaacatcccataactgctattcgcagcagcctaaaccgcaacctatcagatatcggggagtggagcatcttttggacatgctcattcattataatcaggttgtgattcacagtatcaggcttccaaagaatagcaccattgcagacgtgattaatgatttgaaaacaaaggttgaactatccagtcccagtgctgaattgcgcttgttagaggtcttttaccacaagatatataagatttttccactccatgagaagatagagaatattaatgatcagtactggacactacgtgctgaggagattccagaggaggagaaaaatctcggtccaaatgatcggttaattcatgtttatcacttcatgaaagaccctcttcagaatcagcagattcagaactttggagatcctttttatcttgctatccgtgaaggtgagactttagcagaagtaaaggagcgcatacagaaaaaactccaagtccctgatgaggaattctgcaagtggaaattcgctttcatatccatgaaccggccagattacctccaagattcagatgttgtatctgcccgtttccagaggagagatgtctatggagcctgggagcagtatcttggtctggagcatgctgatactgcaccaaaaagggcctatacagccaatcagaaccgtcacacctatgagaagccagtgagaatttacaattga
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| Protein seq | MTMMTPPPLEPEEDEMLVPHQELVAADAAQPMEVVAQTEAASTAESQPAEDPQTSRFTWTIENFTRINAKKHYSDAFVVGGYKWRVLIFPKGNNVDHFSMYLDVADSANLPYGWSRYAQFSLAVVNQIQQKYTIRKDTQHQFNARESDWGFTSFMPLSELYDPSRGYLVDDTVVVEAEVAVRKMVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKVTNLRTVVEGTIEKLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAENHGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLDLDRDDGKYLAPDADRSIRNLYALHRYKFDDERVTKEDTKKALEEQYGGEEEVARDENLKEQIGKDIYFDLVDHEKVRSFRIQKQLPFTTFKEEVAKEYGIPVQFQRFWLWAKRQNHTYRPNRPLSPHEETQSVGQLREVSNKAHNAELKLFLEVELGPDLRPLPPPEKSKEDILLFFKLYNPEKEELCFVGRLFVKALGKPSEILTKLNEMAGFVPNEEVELYEARAKFMMLYLWDNLVYVTPLRRVLGLEDGDIICFQKSPIPDSDTQMRYPDVPSYLEYVHNRQVQGVYFLSVVHFRLLEKPKDDDFSLELSKLHTYDDVVERVARQLGVDDPAKIRLTSHNCYSQQPKPQPIRYRGVEHLLDMLIHYNQVVIHSIRLPKNSTIADVINDLKTKVELSSPSAELRLLEVFYHKIYKIFPLHEKIENINDQYWTLRAEEIPEEEKNLGPNDRLIHVYHFMKDPLQNQQIQNFGDPFYLAIREGETLAEVKERIQKKLQVPDEEFCKWKFAFISMNRPDYLQDSDVVSARFQRRDVYGAWEQYLGLEHADTAPKRAYTANQNRHTYEKPVRIYN |
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| Function | Ubiquitin carboxyl-terminal hydrolase 13 [UniProtKB/Swiss-Prot:Q84WU2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_11g0017800 | OsLiXu_11g0017800.01 | Chr11 | 24798678 | 24814411 | - | NAM | ||
| CDS seq | atgactatgatgacgcctcccccgctcgagccggaggaggacgagatgctcgtgcctcaccaggagctcgtcgctgctgacgccgcccagcccatggaagtggttgcgcaaacggaggcagctagcacggcggagagccagccagctgaggacccgcagacgtcgcggttcacgtggacgatcgagaacttcacccggatcaatgcgaagaagcactactcggatgcgtttgtcgttggcgggtacaaatggcgtgtgctcattttccctaaggggaacaacgtggaccatttctccatgtacttggatgttgccgactctgctaacctcccatatggttggagccgatatgctcagtttagcttggccgttgtcaaccagatccaacagaagtatacgatacgcaaagatactcagcatcaatttaatgcacgtgagagtgattggggtttcacatcttttatgcctttgagtgagctctatgatccaagtagaggataccttgtcgatgatactgttgttgtggaggctgaggttgctgtccgcaaaatggttgattattggacatatgattcaaaaaaagaaacaggttacgttggcctgaagaaccaaggagctacctgttacatgaactctctactacagacactataccatataccatacttcaggaaggctgtgtatcatatgccaaccaccgaaaatgatatgccatctgggagtattccgttggcattgcagagccttttctacaagctccagtatagtgacaatagtgtagccaccaaagagctgaccaaatcttttggatgggacacatatgattccttcatgcaacatgatgtacaagagctcaacagagttctctgtgagaaacttgaagataagatgaaggtgacaaatctgagaactgtcgtagagggaacgattgaaaagttattcgaaggtcaccacatcaattatatagagtgtataaatgttgactataaatccaacaggaaggagtccttttatgaccttcaacttgatgttaaaggttgtcgtgatgtgtatgcatcgtttgataaatatgttgaagttgagcgcctcgaaggtgataataagtatcatgcagagaatcatggtttacaggatgcgaaaaagggtgttctgttccttgatttccccccagttttgcaacttcaactgaagcgttttgagtacgattatatgagagataccatggttaagattaatgaccgctatgaattccctttgcaacttgatttggatagagatgatggaaaatatcttgctccagatgcagatagaagtataagaaacctttatgctcttcacaggtataaatttgatgatgagcgtgtaactaaagaagatactaagaaggcccttgaagagcaatacgggggtgaggaagaggtggctcgagatgagaatttgaaggagcaaattggcaaggatatatattttgacctggtggaccatgaaaaagttcgtagcttccgaattcagaagcagttaccgtttaccactttcaaggaggaagttgcaaaggagtatggcatccctgtacaatttcagcgcttctggttgtgggctaagaggcagaaccacacatacaggcctaatcgtccattgagtcctcatgaagaaacacaatctgtgggacaactgagggaggtatcgaataaggcacacaatgctgagctgaagttgtttttggaagtagaacttggcccggatttgcggcctctccctccacctgagaagagcaaggaagatattcttctgttcttcaaactctataatcccgaaaaggaagaactctgttttgtggggaggctcttcgtaaaggccttgggaaaaccctcagaaatcttgaccaaactaaatgaaatggctggatttgtgccaaatgaagaagttgagctctacgaggcaagagctaaattcatgatgctatatttatgggataatctagtatatgtcactccattgaggcgtgttctaggacttgaagatggggacatcatctgtttccaaaaatcacctatacctgatagtgacactcaaatgcgttatccagatgtcccttcatatctggagtatgttcataataggcaggtacaaggtgtttatttcttgtctgttgtgcactttcggttattggagaaaccaaaggatgatgacttttctttggaattgtcaaaacttcatacctatgatgatgttgttgagagagttgcccgtcagcttggtgtggatgatccagcgaaaattcgtctaacatcccataactgctattcgcagcagcctaaaccgcaacctatcagatatcggggagtggagcatcttttggacatgctcattcattataatcaggttgtgattcacagtatcaggcttccaaagaatagcaccattgcagacgtgattaatgatttgaaaacaaaggttgaactatccagtcccagtgctgaattgcgcttgttagaggtcttttaccacaagatatataagatttttccactccatgagaagatagagaatattaatgatcagtactggacactacgtgctgaggagattccagaggaggagaaaaatctcggtccaaatgatcggttaattcatgtttatcacttcatgaaagaccctcttcagaatcagcagattcagaactttggagatcctttttatcttgctatccgtgaaggtgagactttagcagaagtaaaggagcgcatacagaaaaaactccaagtccctgatgaggaattctgcaagtggaaattcgctttcatatccatgaaccggccagattacctccaagattcagatgttgtatctgcccgtttccagaggagagatgtctatggagcctgggagcagtatcttggtctggagcatgctgatactgcaccaaaaagggcctatacagccaatcagaaccgtcacacctatgagaagccagtgagaatttacaattga
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| Protein seq | MTMMTPPPLEPEEDEMLVPHQELVAADAAQPMEVVAQTEAASTAESQPAEDPQTSRFTWTIENFTRINAKKHYSDAFVVGGYKWRVLIFPKGNNVDHFSMYLDVADSANLPYGWSRYAQFSLAVVNQIQQKYTIRKDTQHQFNARESDWGFTSFMPLSELYDPSRGYLVDDTVVVEAEVAVRKMVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKVTNLRTVVEGTIEKLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAENHGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLDLDRDDGKYLAPDADRSIRNLYALHRYKFDDERVTKEDTKKALEEQYGGEEEVARDENLKEQIGKDIYFDLVDHEKVRSFRIQKQLPFTTFKEEVAKEYGIPVQFQRFWLWAKRQNHTYRPNRPLSPHEETQSVGQLREVSNKAHNAELKLFLEVELGPDLRPLPPPEKSKEDILLFFKLYNPEKEELCFVGRLFVKALGKPSEILTKLNEMAGFVPNEEVELYEARAKFMMLYLWDNLVYVTPLRRVLGLEDGDIICFQKSPIPDSDTQMRYPDVPSYLEYVHNRQVQGVYFLSVVHFRLLEKPKDDDFSLELSKLHTYDDVVERVARQLGVDDPAKIRLTSHNCYSQQPKPQPIRYRGVEHLLDMLIHYNQVVIHSIRLPKNSTIADVINDLKTKVELSSPSAELRLLEVFYHKIYKIFPLHEKIENINDQYWTLRAEEIPEEEKNLGPNDRLIHVYHFMKDPLQNQQIQNFGDPFYLAIREGETLAEVKERIQKKLQVPDEEFCKWKFAFISMNRPDYLQDSDVVSARFQRRDVYGAWEQYLGLEHADTAPKRAYTANQNRHTYEKPVRIYN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_11g0017800 | OsLiXu_11g0017800.02 | Chr11 | 24798660 | 24814436 | - | IsoSeq | ||
| CDS seq | atgcgaagaagcactactcggatgcgtttgtcgttggcgggtacaaatggcgtgtgctcattttccctaaggggaacaacgtggaccatttctccatgtacttggatgttgccgactctgctaacctcccatatggttggagccgatatgctcagtttagcttggccgttgtcaaccagatccaacagaagtatacgatacgcaaagatactcagcatcaatttaatgcacgtgagagtgattggggtttcacatcttttatgc
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| Protein seq | MRRSTTRMRLSLAGTNGVCSFSLRGTTWTISPCTWMLPTLLTSHMVGADMLSLAWPLSTRSNRSIRYAKILSINLMHVRVIGVSHLLC |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr11 | 24802256 | 24802535 | - | OsLiXu_11g0017800.02 | OsLiXu_11g0017800.02,OsLiXu_11g0017800.01 | All |
| SE | Chr11 | 24807670 | 24809171 | - | OsLiXu_11g0017800.02 | OsLiXu_11g0017800.02,OsLiXu_11g0017800.01 | All |
| SE | Chr11 | 24802862 | 24805218 | - | OsLiXu_11g0017800.01 | OsLiXu_11g0017800.02,OsLiXu_11g0017800.01 | All |
| A5 | Chr11 | 24811841 | 24811911 | - | OsLiXu_11g0017800.01 | OsLiXu_11g0017800.02,OsLiXu_11g0017800.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.070816 | 0.0 | 3.492491 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0573000 | RBH | 7.098969 | 8.381068 | 20.363438 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g36470 | RBH | 4.077526 | 3.097703 | 3.155489 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0573000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0018020 | RBH | 2.780928 | 20.995668 | 21.908182 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0018190 | RBH | 0.664127 | 10.122392 | 12.005166 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0017960 | RBH | 4.246960 | 18.974573 | 39.308926 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0017630 | RBH | 0.371989 | 0.820776 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0018060 | RBH | 28.451653 | 38.803356 | 53.274380 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0334500 | RBH | 12.1308985 | 23.250042 | 21.2563865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0018520 | RBH | 1.071424 | 2.849044 | 5.131958 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0347400 | RBH | 15.2571555 | 29.2117075 | 44.0519695 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0018340 | RBH | 0.401995 | 0.486223 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0018470 | RBH | 2.034705 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0017960 | RBH | 9.374911 | 30.907799 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0013500 | RBH | 3.960941 | 0.0 | 5.163750 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0017930 | RBH | 0.695658 | 21.808672 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G017910 | RBH | 1.577463 | 9.166466 | 11.138201 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0018200 | RBH | 6.691531 | 50.962379 | 19.741682 |
