Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_11g0008340 | OGI:11021900 | 13/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr11:7450863-7451140 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atggggagttggggagaagatcataatgagtgccttgttaggggtgatgagccctttgctggcaagctaggtaacctgattggaaagagtatgctgagctaaagggcgcgaggaagaagctagagcagctcatgaaagaactcatggccatcaaccttgcgctggagaagtactcaggcatggagaattttgatgtgcaagtgaaggcttggacaatagagatgcatgagctggcctatgacatggaggatagcatagatctcttcagttactgctag |
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| CDS seq | atggggagttggggagaagatcataatgagtgccttgttaggggtgatgagccctttgctggcaagctagagtatgctgagctaaagggcgcgaggaagaagctagagcagctcatgaaagaactcatggccatcaaccttgcgctggagaagtactcaggcatggagaattttgatgtgcaagtgaaggcttggacaatagagatgcatgagctggcctatgacatggaggatagcatagatctcttcagttactgctag |
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| Protein seq | MGSWGEDHNECLVRGDEPFAGKLEYAELKGARKKLEQLMKELMAINLALEKYSGMENFDVQVKAWTIEMHELAYDMEDSIDLFSYC |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_11g0008340 | OsLiXu_11g0008340.01 | Chr11 | 7450863 | 7451140 | + | NAM | ||
| CDS seq | atggggagttggggagaagatcataatgagtgccttgttaggggtgatgagccctttgctggcaagctagagtatgctgagctaaagggcgcgaggaagaagctagagcagctcatgaaagaactcatggccatcaaccttgcgctggagaagtactcaggcatggagaattttgatgtgcaagtgaaggcttggacaatagagatgcatgagctggcctatgacatggaggatagcatagatctcttcagttactgctag
More
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| Protein seq | MGSWGEDHNECLVRGDEPFAGKLEYAELKGARKKLEQLMKELMAINLALEKYSGMENFDVQVKAWTIEMHELAYDMEDSIDLFSYC |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0237900 | SBH | 0.262520 | 1.201386 | 0.835943 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g13430 | SBH | 0.177530 | 0.808032 | 0.215188 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0237900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0008510 | RBH | 0.0 | 0.0 | 0.129775 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0008410 | RBH | 0.0 | 0.0 | 0.258556 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0008430 | RBH | 0.000000 | 5.582697 | 0.461533 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0008240 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0008380 | RBH | 0.000000 | 2.403698 | 0.294278 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0111700 | RBH | 0.045602 | 0.050822 | 0.098561 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0008410 | RBH | 0.153732 | 0.876456 | 0.105843 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0117700 | SBH | 0.0470635 | 0.118865 | 0.0612595 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0008470 | RBH | 0.0 | 0.056802 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0008560 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0008500 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0065950 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0008410 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G008500 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0008330 | RBH | 0.0 | 0.0 | 0.326098 |
