Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_10g0012890 | OGI:10053120 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr10:18578229-18587251 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gtctcttttccgggttggacttgcccactctctctccaccccccccccctccccccaaccccacctcgtcgctgcgccgcggggcctcgacgtggccgccaccgccgccgccgacgacgacgcagcgggggccccagatctggacgctctgaggcgtcgcagccgagccgccgcccgtctcggggacctgccacgctgcagtcctggtaggtaggcccgcgccacggtgagactctcgccgcccgccgtcgtcgtcggcccccaacgaaaggcggcggcgagcggcgaccgcactccctccgttcgctgctggtttgaaaggtgtggagtgatttcgtttgctctctaaggtgtttggtggatcgtatcatgcttgagggggttgtacgggatactggtttggtttcggttgtgcttagtttggtatggataatggattactggaaatctcatcgtgttaatttacttgtgtgatgctgcggggtagatggtgttaaacgttagtagttggtatgtgtcttgacactttggtaatctagaggaggatgctatgatgttgtgcatagcaaggactagttggatcgaattcagttatccaggttagtttttcaatacactgatggcataattgacctatgcaattgcttcgttgcgattgcagcattgttctattggaagggcagggtgagggatgtcgtcgtcttcgtcatccgtagtatatgatggatggatggtcaggtatggtcgccgcaagattgggcggtcattcatccacatgcgctacttcgtgctggagacccggctgctgtcctactacaaacgcaagccccagcacaagatgcccaagctccccattaagtcccttcacatcgatggcaactgcagggttgaggaccggggcctcaagatgcaccatggccatgtacatctcttctcttccgtgctcttgattcctaatcctcactgtagcttttgcattccattccattccattccattgattttttttttttgctttcattttccctcttgcagatgctttatgttttgtgcgtttacaacaaaagggagaagcaccagcgcatcacggttaaccttccctcattcatcccttactcattgcaccaagcataataatcataaattttgttttgttaattccactgcattgcacatttgtcatatagtaacttctatttggtctgtcgctctcatatgatattcccatagggaggaatttcctttacagtggaaaagaaaaataaaagaggtggaaaatctagtgtttctttttccagcacaaacaaacggaagacatgctttgcccattttaatgtgtttagtataccaacaatataagccacttttctttattgagtaccattttgttttgaccaggtattccccttttttggcatggagagagggccttgcatcttactttagaaataatctaatgttcctcattcagtcttgcataacttgtaccagatggctgcattcaacatccaggaggctttaatttggaaggaaaaaattgagatggtcattgatcaggttcacccggcatactttgattcttacctacatctctgttttagtttattgacttcatcgttgctccttatggaagcaccaagcacatgcaaacaaacacacaacacacttacttttggcacttagacacctattttgacagactagtgtgtaatgttgattttggatcgatgaagaactttttcccacatcctttcactactatttcttaatttgatactcctcaccacacattgattcttttgaattaatgcagcaacaaggagtggtggcgtctgatggtaatctagcccacagctcatcacaacaaaaagtgagcttagaaaatggaaggaaatcttctttctctgatcatgaaagtctgtaagtggatgactaacatgtttcttttgcctattacatgcatatcttatcagtactcttctactcttttttTcttatcttagtttcttctattgtacccctacattatcttttctactttctgctgttacactttcatgttgactgttgagcccttcaccaacaacaaagcatgcattgatatctatgtctgctgagaacatatgtatcgaataatcttagttcccgatttccaagttaccaatatttcgcatgcatcttttatatcttattgtgagagatgatgctagcgtttctactacatgctttgacagggtagcctttaaaataaaaaaatcgtactggagtgaggaatcagttagacaattatggaatttatgtggtgtcttatgagattgcaccatgtaatttgatcagtttatttgtatgaaacaacaaaaagaaggaacaatgtctcgaatcttctggcatttagttctcccaatagtttttggcattgtaaagtttaaacatatagttttatcgtggttgaagaaagaacagcaacctgatcttgaaaccatataaactgccttaattgttttgctacacatcaaacatttgagctctttgtagctccattataaaaaatatatttgaagttttcaggtttgttgtacatattactcacatcgactgatgcttatgtgtaactttgtttcatttgttcaagtatagcctgttgtgattattattttttatcaaactgacatgtccccttattatgttctgtcaggtacagccatgaagaggaggaagaagaagaggacaatcaacgatcattaatgcgaagaacgacgattggaaatggtctgtgagatggtgttgggcatgacttgtcttcttccttgcatctttttttttctagttcaaagttcaaactgggaaattgtttctattgttgtcatttgtaggtcctccagaatcgttatatgattggacccgtgaaaatgatttgggaatatcaaatcagggaagtcctgatcatgttttctctagaagacattggcgccttgtcagatgccaaaatggcaagtacttatattatgttctttaccctgtttctcttatgtaattgggatgctcatttgataatttaatgtgatgttaatttaaatttggcttcaggcctccgcatttttgaggaactccaagatgttgattaccttgtaagttgttcataattataggtatgaacaggtagtttgaatatttggccacattcttttgttgcttgatgcttgtgtaattttgacaggcaagaagctgtagcagagccatgaaggctgttggtgttgttgaggcttcctgtgaggctatatttcaacttgtgatgagcatggataccacccgttatgagtatattttcttttctttcaacattcaacaaatcaagtccaatttgtgtactgcatttctctttgcaaaaatatccttatgtttttttttcttttttttcccaggtgggactgcagcttccagtatggtagtctagtggaggaggtagatggtcacactgcaattctgtaccataggctacagctggattggttctcaatgtatgttttcccttcttgttggaaacattctctacttccttttggtgttccacaagggtgaagtcagtgtacacttcattttgtgattcacaagcaaatttgttacacttatattcttgacatatgtttcctgccttatctctgttgtgcagctgatagttagaagcaatcatctatgctaattattttaatttactagcatctattcattaaaatacagttcagcggaacttggactaggcattgtctgattattctgcattaatctttattttataatgattctggacagtgaaaattaatggtaaagtagtccaatcatattttaccattaaaaatttatctcattattggtgaactttgcggttattttcataatatgggatacaacatggatttgattgatatctttccaggtttgtttggcctcgtgatctttgttatgtacgatattggcgacgtaatgatgatgggagctatggttggtattcttgggcttatgcacagacgtgaagccatggatgtgtactaatttgtttttccacttgccatttgcagttgtgctatttcaatccagagagcacccaaactgtggtccacaaccaggatttgtgagggcacaaatagagagtaaggaaattgctctttggagttcactatagcacaccatctgtattttattaatattctaatgtactgtaggtacagcatttccttttcttaatccctgttctcttttatatatttgtaggtggtggttttaatatttctcctctgaaatcccgtaatggaagaatccgaactcaagtacagcatctcatgcagatagatttaaagggttggggagttggttacttaccttcttttcagcagcattgtcttcttcatatgctaaacagtgttgccggtaaattcttggttcgggaataaccttgtgatcatctttttccagatagccaatgaacctttttctttctttcagatagccaatcaatttcctctgcaaatcccttaataatgcaactgaaaggaattcttgttttatctggtgcatggttcagggttttaagttttaactaatctatggggattggtttgattagatcaggatcttgtcttatcatcatagggtgctagcttgggtaatgcccatacatatttggtcatgttagctagttcagcgttaatccattgcaagtaaccaggactacaaaaaatgttggatgacttaacaggtatctgtcctgggtgcatgaagttgcttgccataaattcagcgttaatccattgcaagtaaccagtagtccatgtaatgttggataagttaacaggtttctgtcctgggtgcatgaaatgatgttgcttgcaatagattatgttaccttacaaaatgactagtgttggggattttgaagcagcatattctcttttgaacctgctttctgcaaatgatttacaaggctaataccaccataggtgacatccgtccatcgcagatccacagtagaatttggacaaaagtcttcccattttgcatcgtgtggcagtctgctttccaccagggctatatctgacatgtatggtccttattttatcataagagagttgtaactgctgtatatgcttgttaattactactccatgaacaattaagtgtgaacgcatgatacatgcttgggagacggttttttcaaaaaagtctcgtccatgaccattcaagcgtattgtagaactgtacttgttgatggcattttgttgaattgagcgcttgtcaatggaaaatcatagaattttcctttaagttgactaaggttgatgattacatgagtggggttgagctgtgctctattacttacaaaaattacaatccctctattacttacaaagttgcgatgcaccttctttttcctactgacagggctcagggaatggttttcacaaagtgatgaaaatctaatacttcctaggattcctgttatggccaatatggctccgcctgtttcttctaagaaagggagaacaacacaagataatactatgcaaaccggccttcaaatggaccaaagtagacaatctacaatgcttgatgaagaatctgatgaagatgaagatcaaatacctgaatctgagcaagaggttgatgaattactcatagtgtttccaatttactcaccttaaattctaagtaagattatgtttactgtgcagacatcaactcatggccatgatgcacctgttaaactgtcaggtatattgtgattccattttcctcgagacttttataacatgataggagtctagtttgcatatgatattagtcttcattaactgtagtgctggatgaggaggattcagatcagattgatgtttctggattttctggaaatttacgccgggatgatcgcgacaacactcgtgattgctggagaatgtctgatggaaataacttcagagtgcgaagcaagacttttatatatgataaaagcaaggttgtaatcttccctaggaatactgtggaatctttttggctgtttttcaggctctcttatttgttttgttaaactatttattcatagattcctgctggaaaacctcttatgaagcttgttgctgttgactggtttaaagatatgaaacgaatggatcatgttgctagaagaaaaggctgtgcagtacaagtgagtcacatttctgtccttatatattagtgaatctgtaataatgtaaataaatagtgccgccttctagtttttgttcaatggagagctcaccatgtgtatgcaaaactgaattgttgctatgactatagtgcaatttcattattatcatttactccctccgtcccacaatataagggattttgagtttttcttgCaacgtttgaTcactcgtcttattcaaatttttttgcaaatataaaaaacgaaaagttgAgcttaaagtactgtggataataaaCtaagtcacGaataaaataaataataatttcaaTTtttttTaataagacgagtggtcaaacgttgcaagcaaaaactcaaaatcccttatattctgggacggagggagtataacataagatgacgccttgaatgagttgtgttctgcttattgagtgttagggttgtaggttgagtcaccatagcattgttttttatgcgtataacatgtttaatcctatactacaagttttgttttatttcttcgctttattttctcctcttttgcgaatatagctgatatttcctatcacagattttttttTcccctatttatatttatgttgagctatcctatattgtgtatttgtgttttatgcggttaacctcaacctgctaagttgatccttttactaggttgctgctgagaagggcctttttgcattggcagtaaatctacaagtaagtattccctgggcattccttaacaaaattatatacctcccagcaaaatgaaatatatacttgctcatttgtgcacttggctccctaaactttaaaaatactttcttggctccctaattttccttcgtctacacacacacactccttttcgctgtacggtaacagaacttgctgatgtgtcaacatatcacccctaagaagcatcattgtctcgtgaagttggcaaatactaggtttcttctatcagtcccttatgggtctaggactgatggctacatggccctccctcccgcactctcacatacattttttacctaacatggaaatggaacaattatgcaaacagatgttaatgtgaggagatgaaaatgtcattttcaagtttaggccttagggagctagtattaactcttttctttggtgtacagtagcacttgtcaacaatacacctacaattgtactccttatttcttgctagctgttgtgctaaaacaacagtgccatgtaccatcgtttttgccattctggtgaacgagcaaagatggatgatattgcgtactggtcctgcatttccaatatagtttttgatggcataagtttgctgttgcaggttcctggcacaactaactatagtatggtattctattttgttacgaagaaactgataccaaactccttattgcaacgctttgttgatggtgatgatgaattccgcaatagtaggtttaagttgattccatctgtccccaaggtatggtgctttgtctgtcatgctttaaaaatgttctgtgaggttatgcaaagtaaagtataaaggaatgctctagtatgacaaatataatacttcgtcctcattaattcccatgatgttatgtaattttcaatttcagggctcatggattgtccgtcaaagtgttggcagcacaccttgtctgctgggaaaagcagttgacattacctatatccgtggtccaaattatttggaagtaagttttcaatctgactcactttttggtaccctttttattacaaaatttggaaatgcgagtttgccatgtctttgtgaaaagagaaatcttttgtggctgatgtttccttttagctaagaaataaagaatgctttatggtgcagatagatgtggacatcggttcatctactgttgcaaatggagtcttggggctagtgtgtggtgtgatcacgacactagttgttgacatggcttttcttgtccaggtaggcagttttggtgtcgaagtagttgttttaagtttaaaacattttgttggtgcaatgtctaataattggcaaaactgaacactgtttgtagggaaatacatatgaggagctcccagaacgactgatcggtgcagttcgtgtttcgcacattgaactgaaatccgcaatagttccggtgcttggggattaacaaacttactactgctgcttactgcactgatgatcgcaacgttgggcaccatctacttgactcctgacagcatacaacaatacaacacatgtgtacagagatagaggaaccaactaccggcgctcatgtcatgtcaaacaatgtggcctattctgacttgaagtgaacaaaatgatgaatgtttcaatgtatgtaattatgctttgtgctcaatcattctggtaggtattagtacaattgcgtggcaaaaagaaagaaaggagattaaaaactagaaattaggagactggagagcgaggcccaggttagggtcagctcagcttgaataaaaatagccatgtttacttgagtttacgttggacagtaagaaaggaattgagatgactacatttgcaaggtgaaaacacactacaccattcttcatgcaatattacttctatgataagataatgtgctgttaaaattgtatttcttcagggtagggtaccaggtttctatctatagatttacctcatatgttatgtcattttgtcaggaaccaacattatgtcattttgcaccaacagttatcttaactagatggtacccgagcgttgctgtggacatttgctaaaaataattttgttttagatgtatgtgcacagttgtatgaaaatatatgcatttttgcaccaacg
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| CDS seq | atgtcgtcgtcttcgtcatccgtagtatatgatggatggatggtcaggtatggtcgccgcaagattgggcggtcattcatccacatgcgctacttcgtgctggagacccggctgctgtcctactacaaacgcaagccccagcacaagatgcccaagctccccattaagtcccttcacatcgatggcaactgcagggttgaggaccggggcctcaagatgcaccatggccatatgctttatgttttgtgcgtttacaacaaaagggagaagcaccagcgcatcacgatggctgcattcaacatccaggaggctttaatttggaaggaaaaaattgagatggtcattgatcagcaacaaggagtggtggcgtctgatggtaatctagcccacagctcatcacaacaaaaagtgagcttagaaaatggaaggaaatcttctttctctgatcatgaaagtctgtacagccatgaagaggaggaagaagaagaggacaatcaacgatcattaatgcgaagaacgacgattggaaatggtcctccagaatcgttatatgattggacccgtgaaaatgatttgggaatatcaaatcagggaagtcctgatcatgttttctctagaagacattggcgccttgtcagatgccaaaatggcctccgcatttttgaggaactccaagatgttgattaccttgcaagaagctgtagcagagccatgaaggctgttggtgttgttgaggcttcctgtgaggctatatttcaacttgtgatgagcatggataccacccgttatgagtgggactgcagcttccagtatggtagtctagtggaggaggtagatggtcacactgcaattctgtaccataggctacagctggattggttctcaatgtttgtttggcctcgtgatctttgttatgtacgatattggcgacgtaatgatgatgggagctatgttgtgctatttcaatccagagagcacccaaactgtggtccacaaccaggatttgtgagggcacaaatagagagtggtggttttaatatttctcctctgaaatcccgtaatggaagaatccgaactcaagtacagcatctcatgcagatagatttaaagggttggggagttggttacttaccttcttttcagcagcattgtcttcttcatatgctaaacagtgttgccgggctcagggaatggttttcacaaagtgatgaaaatctaatacttcctaggattcctgttatggccaatatggctccgcctgtttcttctaagaaagggagaacaacacaagataatactatgcaaaccggccttcaaatggaccaaagtagacaatctacaatgcttgatgaagaatctgatgaagatgaagatcaaatacctgaatctgagcaagagacatcaactcatggccatgatgcacctgttaaactgtcagtgctggatgaggaggattcagatcagattgatgtttctggattttctggaaatttacgccgggatgatcgcgacaacactcgtgattgctggagaatgtctgatggaaataacttcagagtgcgaagcaagacttttatatatgataaaagcaagattcctgctggaaaacctcttatgaagcttgttgctgttgactggtttaaagatatgaaacgaatggatcatgttgctagaagaaaaggctgtgcagtacaagttgctgctgagaagggcctttttgcattggcagtaaatctacaagttcctggcacaactaactatagtatggtattctattttgttacgaagaaactgataccaaactccttattgcaacgctttgttgatggtgatgatgaattccgcaatagtaggtttaagttgattccatctgtccccaagggctcatggattgtccgtcaaagtgttggcagcacaccttgtctgctgggaaaagcagttgacattacctatatccgtggtccaaattatttggaaatagatgtggacatcggttcatctactgttgcaaatggagtcttggggctagtgtgtggtgtgatcacgacactagttgttgacatggcttttcttgtccagggaaatacatatgaggagctcccagaacgactgatcggtgcagttcgtgtttcgcacattgaactgaaatccgcaatagttccggtgcttggggattaa
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| Protein seq | MSSSSSSVVYDGWMVRYGRRKIGRSFIHMRYFVLETRLLSYYKRKPQHKMPKLPIKSLHIDGNCRVEDRGLKMHHGHMLYVLCVYNKREKHQRITMAAFNIQEALIWKEKIEMVIDQQQGVVASDGNLAHSSSQQKVSLENGRKSSFSDHESLYSHEEEEEEEDNQRSLMRRTTIGNGPPESLYDWTRENDLGISNQGSPDHVFSRRHWRLVRCQNGLRIFEELQDVDYLARSCSRAMKAVGVVEASCEAIFQLVMSMDTTRYEWDCSFQYGSLVEEVDGHTAILYHRLQLDWFSMFVWPRDLCYVRYWRRNDDGSYVVLFQSREHPNCGPQPGFVRAQIESGGFNISPLKSRNGRIRTQVQHLMQIDLKGWGVGYLPSFQQHCLLHMLNSVAGLREWFSQSDENLILPRIPVMANMAPPVSSKKGRTTQDNTMQTGLQMDQSRQSTMLDEESDEDEDQIPESEQETSTHGHDAPVKLSVLDEEDSDQIDVSGFSGNLRRDDRDNTRDCWRMSDGNNFRVRSKTFIYDKSKIPAGKPLMKLVAVDWFKDMKRMDHVARRKGCAVQVAAEKGLFALAVNLQVPGTTNYSMVFYFVTKKLIPNSLLQRFVDGDDEFRNSRFKLIPSVPKGSWIVRQSVGSTPCLLGKAVDITYIRGPNYLEIDVDIGSSTVANGVLGLVCGVITTLVVDMAFLVQGNTYEELPERLIGAVRVSHIELKSAIVPVLGD |
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| Function | Protein ENHANCED DISEASE RESISTANCE 2 [UniProtKB/Swiss-Prot:F4JSE7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_10g0012890 | OsLiXu_10g0012890.01 | Chr10 | 18578229 | 18587251 | + | NAM | ||
| CDS seq | atgtcgtcgtcttcgtcatccgtagtatatgatggatggatggtcaggtatggtcgccgcaagattgggcggtcattcatccacatgcgctacttcgtgctggagacccggctgctgtcctactacaaacgcaagccccagcacaagatgcccaagctccccattaagtcccttcacatcgatggcaactgcagggttgaggaccggggcctcaagatgcaccatggccatatgctttatgttttgtgcgtttacaacaaaagggagaagcaccagcgcatcacgatggctgcattcaacatccaggaggctttaatttggaaggaaaaaattgagatggtcattgatcagcaacaaggagtggtggcgtctgatggtaatctagcccacagctcatcacaacaaaaagtgagcttagaaaatggaaggaaatcttctttctctgatcatgaaagtctgtacagccatgaagaggaggaagaagaagaggacaatcaacgatcattaatgcgaagaacgacgattggaaatggtcctccagaatcgttatatgattggacccgtgaaaatgatttgggaatatcaaatcagggaagtcctgatcatgttttctctagaagacattggcgccttgtcagatgccaaaatggcctccgcatttttgaggaactccaagatgttgattaccttgcaagaagctgtagcagagccatgaaggctgttggtgttgttgaggcttcctgtgaggctatatttcaacttgtgatgagcatggataccacccgttatgagtgggactgcagcttccagtatggtagtctagtggaggaggtagatggtcacactgcaattctgtaccataggctacagctggattggttctcaatgtttgtttggcctcgtgatctttgttatgtacgatattggcgacgtaatgatgatgggagctatgttgtgctatttcaatccagagagcacccaaactgtggtccacaaccaggatttgtgagggcacaaatagagagtggtggttttaatatttctcctctgaaatcccgtaatggaagaatccgaactcaagtacagcatctcatgcagatagatttaaagggttggggagttggttacttaccttcttttcagcagcattgtcttcttcatatgctaaacagtgttgccgggctcagggaatggttttcacaaagtgatgaaaatctaatacttcctaggattcctgttatggccaatatggctccgcctgtttcttctaagaaagggagaacaacacaagataatactatgcaaaccggccttcaaatggaccaaagtagacaatctacaatgcttgatgaagaatctgatgaagatgaagatcaaatacctgaatctgagcaagagacatcaactcatggccatgatgcacctgttaaactgtcagtgctggatgaggaggattcagatcagattgatgtttctggattttctggaaatttacgccgggatgatcgcgacaacactcgtgattgctggagaatgtctgatggaaataacttcagagtgcgaagcaagacttttatatatgataaaagcaagattcctgctggaaaacctcttatgaagcttgttgctgttgactggtttaaagatatgaaacgaatggatcatgttgctagaagaaaaggctgtgcagtacaagttgctgctgagaagggcctttttgcattggcagtaaatctacaagttcctggcacaactaactatagtatggtattctattttgttacgaagaaactgataccaaactccttattgcaacgctttgttgatggtgatgatgaattccgcaatagtaggtttaagttgattccatctgtccccaagggctcatggattgtccgtcaaagtgttggcagcacaccttgtctgctgggaaaagcagttgacattacctatatccgtggtccaaattatttggaaatagatgtggacatcggttcatctactgttgcaaatggagtcttggggctagtgtgtggtgtgatcacgacactagttgttgacatggcttttcttgtccagggaaatacatatgaggagctcccagaacgactgatcggtgcagttcgtgtttcgcacattgaactgaaatccgcaatagttccggtgcttggggattaa
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| Protein seq | MSSSSSSVVYDGWMVRYGRRKIGRSFIHMRYFVLETRLLSYYKRKPQHKMPKLPIKSLHIDGNCRVEDRGLKMHHGHMLYVLCVYNKREKHQRITMAAFNIQEALIWKEKIEMVIDQQQGVVASDGNLAHSSSQQKVSLENGRKSSFSDHESLYSHEEEEEEEDNQRSLMRRTTIGNGPPESLYDWTRENDLGISNQGSPDHVFSRRHWRLVRCQNGLRIFEELQDVDYLARSCSRAMKAVGVVEASCEAIFQLVMSMDTTRYEWDCSFQYGSLVEEVDGHTAILYHRLQLDWFSMFVWPRDLCYVRYWRRNDDGSYVVLFQSREHPNCGPQPGFVRAQIESGGFNISPLKSRNGRIRTQVQHLMQIDLKGWGVGYLPSFQQHCLLHMLNSVAGLREWFSQSDENLILPRIPVMANMAPPVSSKKGRTTQDNTMQTGLQMDQSRQSTMLDEESDEDEDQIPESEQETSTHGHDAPVKLSVLDEEDSDQIDVSGFSGNLRRDDRDNTRDCWRMSDGNNFRVRSKTFIYDKSKIPAGKPLMKLVAVDWFKDMKRMDHVARRKGCAVQVAAEKGLFALAVNLQVPGTTNYSMVFYFVTKKLIPNSLLQRFVDGDDEFRNSRFKLIPSVPKGSWIVRQSVGSTPCLLGKAVDITYIRGPNYLEIDVDIGSSTVANGVLGLVCGVITTLVVDMAFLVQGNTYEELPERLIGAVRVSHIELKSAIVPVLGD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_10g0012890 | OsLiXu_10g0012890.03 | Chr10 | 18578464 | 18586963 | + | NAM | ||
| CDS seq | atgtcgtcgtcttcgtcatccgtagtatatgatggatggatggtcaggtatggtcgccgcaagattgggcggtcattcatccacatgcgctacttcgtgctggagacccggctgctgtcctactacaaacgcaagccccagcacaagatgcccaagctccccattaagtcccttcacatcgatggcaactgcagggttgaggaccggggcctcaagatgcaccatggccatatgctttatgttttgtgcgtttacaacaaaagggagaagcaccagcgcatcacgatggctgcattcaacatccaggaggctttaatttggaaggaaaaaattgagatggtcattgatcagcaacaaggagtggtggcgtctgatggtaatctagcccacagctcatcacaacaaaaagtgagcttagaaaatggaaggaaatcttctttctctgatcatgaaagtctgtacagccatgaagaggaggaagaagaagaggacaatcaacgatcattaatgcgaagaacgacgattggaaatggcctccgcatttttgaggaactccaagatgttgattaccttgcaagaagctgtagcagagccatgaaggctgttggtgttgttgaggcttcctgtgaggctatatttcaacttgtgatgagcatggataccacccgttatgagtgggactgcagcttccagtatggtagtctagtggaggaggtagatggtcacactgcaattctgtaccataggctacagctggattggttctcaatgtatgttttcccttcttgtttgtttggcctcgtgatctttgttatgtacgatattggcgacgtaatgatgatgggagctatggttggtattcttgggcttatgcacagacttgtgctatttcaatccagagagcacccaaactgtggtccacaaccaggatttgtgagggcacaaatagagagtggtggttttaatatttctcctctgaaatcccgtaatggaagaatccgaactcaagtacagcatctcatgcagatagatttaaagggttggggagttggttacttaccttcttttcagcagcattgtcttcttcatatgctaaacagtgttgccgggctcagggaatggttttcacaaagtgatgaaaatctaatacttcctaggattcctgttatggccaatatggctccgcctgtttcttctaagaaagggagaacaacacaagataatactatgcaaaccggccttcaaatggaccaaagtagacaatctacaatgcttgatgaagaatctgatgaagatgaagatcaaatacctgaatctgagcaagagacatcaactcatggccatgatgcacctgttaaactgtcagtgctggatgaggaggattcagatcagattgatgtttctggattttctggaaatttacgccgggatgatcgcgacaacactcgtgattgctggagaatgtctgatggaaataacttcagagtgcgaagcaagacttttatatatgataaaagcaagattcctgctggaaaacctcttatgaagcttgttgctgttgactggtttaaagatatgaaacgaatggatcatgttgctagaagaaaaggctgtgcagtacaagttgctgctgagaagggcctttttgcattggcagtaaatctacaagttcctggcacaactaactatagtatggtattctattttgttacgaagaaactgataccaaactccttattgcaacgctttgttgatggtgatgatgaattccgcaatagtaggtttaagttgattccatctgtccccaagggctcatggattgtccgtcaaagtgttggcagcacaccttgtctgctgggaaaagcagttgacattacctatatccgtggtccaaattatttggaaatagatgtggacatcggttcatctactgttgcaaatggagtcttggggctagtgtgtggtgtgatcacgacactagttgttgacatggcttttcttgtccagggaaatacatatgaggagctcccagaacgactgatcggtgcagttcgtgtttcgcacattgaactgaaatccgcaatagttccggtgcttggggattaa
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| Protein seq | MSSSSSSVVYDGWMVRYGRRKIGRSFIHMRYFVLETRLLSYYKRKPQHKMPKLPIKSLHIDGNCRVEDRGLKMHHGHMLYVLCVYNKREKHQRITMAAFNIQEALIWKEKIEMVIDQQQGVVASDGNLAHSSSQQKVSLENGRKSSFSDHESLYSHEEEEEEEDNQRSLMRRTTIGNGLRIFEELQDVDYLARSCSRAMKAVGVVEASCEAIFQLVMSMDTTRYEWDCSFQYGSLVEEVDGHTAILYHRLQLDWFSMYVFPSCLFGLVIFVMYDIGDVMMMGAMVGILGLMHRLVLFQSREHPNCGPQPGFVRAQIESGGFNISPLKSRNGRIRTQVQHLMQIDLKGWGVGYLPSFQQHCLLHMLNSVAGLREWFSQSDENLILPRIPVMANMAPPVSSKKGRTTQDNTMQTGLQMDQSRQSTMLDEESDEDEDQIPESEQETSTHGHDAPVKLSVLDEEDSDQIDVSGFSGNLRRDDRDNTRDCWRMSDGNNFRVRSKTFIYDKSKIPAGKPLMKLVAVDWFKDMKRMDHVARRKGCAVQVAAEKGLFALAVNLQVPGTTNYSMVFYFVTKKLIPNSLLQRFVDGDDEFRNSRFKLIPSVPKGSWIVRQSVGSTPCLLGKAVDITYIRGPNYLEIDVDIGSSTVANGVLGLVCGVITTLVVDMAFLVQGNTYEELPERLIGAVRVSHIELKSAIVPVLGD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_10g0012890 | OsLiXu_10g0012890.02 | Chr10 | 18578239 | 18586963 | + | NAM | ||
| CDS seq | atgtcgtcgtcttcgtcatccgtagtatatgatggatggatggtcaggtatggtcgccgcaagattgggcggtcattcatccacatgcgctacttcgtgctggagacccggctgctgtcctactacaaacgcaagccccagcacaagatgcccaagctccccattaagtcccttcacatcgatggcaactgcagggttgaggaccggggcctcaagatgcaccatggccatatgctttatgttttgtgcgtttacaacaaaagggagaagcaccagcgcatcacgatggctgcattcaacatccaggaggctttaatttggaaggaaaaaattgagatggtcattgatcagcaacaaggagtggtggcgtctgatggtaatctagcccacagctcatcacaacaaaaagtgagcttagaaaatggaaggaaatcttctttctctgatcatgaaagtctgtacagccatgaagaggaggaagaagaagaggacaatcaacgatcattaatgcgaagaacgacgattggaaatggcctccgcatttttgaggaactccaagatgttgattaccttgcaagaagctgtagcagagccatgaaggctgttggtgttgttgaggcttcctgtgaggctatatttcaacttgtgatgagcatggataccacccgttatgagtgggactgcagcttccagtatggtagtctagtggaggaggtagatggtcacactgcaattctgtaccataggctacagctggattggttctcaatgtttgtttggcctcgtgatctttgttatgtacgatattggcgacgtaatgatgatgggagctatgttgtgctatttcaatccagagagcacccaaactgtggtccacaaccaggatttgtgagggcacaaatagagagtggtggttttaatatttctcctctgaaatcccgtaatggaagaatccgaactcaagtacagcatctcatgcagatagatttaaagggttggggagttggttacttaccttcttttcagcagcattgtcttcttcatatgctaaacagtgttgccgggctcagggaatggttttcacaaagtgatgaaaatctaatacttcctaggattcctgttatggccaatatggctccgcctgtttcttctaagaaagggagaacaacacaagataatactatgcaaaccggccttcaaatggaccaaagtagacaatctacaatgcttgatgaagaatctgatgaagatgaagatcaaatacctgaatctgagcaagagacatcaactcatggccatgatgcacctgttaaactgtcagtgctggatgaggaggattcagatcagattgatgtttctggattttctggaaatttacgccgggatgatcgcgacaacactcgtgattgctggagaatgtctgatggaaataacttcagagtgcgaagcaagacttttatatatgataaaagcaagattcctgctggaaaacctcttatgaagcttgttgctgttgactggtttaaagatatgaaacgaatggatcatgttgctagaagaaaaggctgtgcagtacaagttgctgctgagaagggcctttttgcattggcagtaaatctacaagttcctggcacaactaactatagtatggtattctattttgttacgaagaaactgataccaaactccttattgcaacgctttgttgatggtgatgatgaattccgcaatagtaggtttaagttgattccatctgtccccaagggctcatggattgtccgtcaaagtgttggcagcacaccttgtctgctgggaaaagcagttgacattacctatatccgtggtccaaattatttggaaatagatgtggacatcggttcatctactgttgcaaatggagtcttggggctagtgtgtggtgtgatcacgacactagttgttgacatggcttttcttgtccagggaaatacatatgaggagctcccagaacgactgatcggtgcagttcgtgtttcgcacattgaactgaaatccgcaatagttccggtgcttggggattaa
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| Protein seq | MSSSSSSVVYDGWMVRYGRRKIGRSFIHMRYFVLETRLLSYYKRKPQHKMPKLPIKSLHIDGNCRVEDRGLKMHHGHMLYVLCVYNKREKHQRITMAAFNIQEALIWKEKIEMVIDQQQGVVASDGNLAHSSSQQKVSLENGRKSSFSDHESLYSHEEEEEEEDNQRSLMRRTTIGNGLRIFEELQDVDYLARSCSRAMKAVGVVEASCEAIFQLVMSMDTTRYEWDCSFQYGSLVEEVDGHTAILYHRLQLDWFSMFVWPRDLCYVRYWRRNDDGSYVVLFQSREHPNCGPQPGFVRAQIESGGFNISPLKSRNGRIRTQVQHLMQIDLKGWGVGYLPSFQQHCLLHMLNSVAGLREWFSQSDENLILPRIPVMANMAPPVSSKKGRTTQDNTMQTGLQMDQSRQSTMLDEESDEDEDQIPESEQETSTHGHDAPVKLSVLDEEDSDQIDVSGFSGNLRRDDRDNTRDCWRMSDGNNFRVRSKTFIYDKSKIPAGKPLMKLVAVDWFKDMKRMDHVARRKGCAVQVAAEKGLFALAVNLQVPGTTNYSMVFYFVTKKLIPNSLLQRFVDGDDEFRNSRFKLIPSVPKGSWIVRQSVGSTPCLLGKAVDITYIRGPNYLEIDVDIGSSTVANGVLGLVCGVITTLVVDMAFLVQGNTYEELPERLIGAVRVSHIELKSAIVPVLGD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr10 | 18580997 | 18581316 | + | OsLiXu_10g0012890.01 | OsLiXu_10g0012890.02,OsLiXu_10g0012890.01,OsLiXu_10g0012890.03 | All |
| A5 | Chr10 | 18581746 | 18582163 | + | OsLiXu_10g0012890.03 | OsLiXu_10g0012890.02,OsLiXu_10g0012890.01,OsLiXu_10g0012890.03 | All |
| A5 | Chr10 | 18582227 | 18582305 | + | OsLiXu_10g0012890.03 | OsLiXu_10g0012890.02,OsLiXu_10g0012890.01,OsLiXu_10g0012890.03 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.566575 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0455900 | RBH | 3.480153 | 1.979970 | 4.205713 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g31770 | RBH | 2.111549 | 1.327270 | 1.034237 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0455900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0013190 | RBH | 0.352115 | 23.426695 | 8.962668 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0013410 | RBH | 0.536569 | 4.149266 | 4.848760 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0012980 | RBH | 1.801310 | 18.850904 | 13.252283 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0013260 | RBH | 0.258684 | 0.486189 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0013170 | RBH | 9.152503 | 24.884277 | 23.890196 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0277000 | RBH | 6.733668 | 18.0023945 | 22.394782 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0013190 | RBH | 0.460848 | 1.161881 | 1.680666 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0297500 | RBH | 10.634083 | 30.980404 | 22.070485 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0012900 | RBH | 0.225718 | 0.374134 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0012800 | RBH | 0.803582 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0013180 | RBH | 14.816431 | 44.555294 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0061610 | RBH | 0.172850 | 0.0 | 0.474967 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0013430 | RBH | 0.328913 | 14.210072 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G013130 | RBH | 0.743647 | 7.836259 | 4.458007 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0013060 | RBH | 1.394064 | 33.299953 | 12.542972 |
