Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_10g0007010 | OGI:10035000 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr10:11663642-11666579 | ||||||||
| Gene Symbol | SDRLK-45 | ||||||||||
| DNA seq | tactccaaatggttttgtttgggccttgtagaaagggtacagcactggattgaactttgcagaatatgcaaaaacagtaagtcatatgaagttgtgcacattcacttgcaattgctatgttagtgttcatcctagcccgtagaatgtgcttatttccttggatcagcagttaggctgcatatttttgttagtctatatccattactgcttcacatgcatgtcatctgtgcatatatcagtatgacttgcaggttgtcagtacatttctctatattggactcaacaatgtactctcaactgggaaggaaatctttctgtgttgttaaaagcatctcaactgacaaaatgacaggtctacagtatgtataacatgtcctactgtgtacagacacagagatatggatcttattatgaacactgatgtttcttattttctatgcctagttttcttgaaatgagacagaaactataattttctcataaactactggaaattacaaattagcatacaaatttacggtaaatctaaagatgacagtggtgttgaatgtgagcctcctgtgatagcattcagtagtcttggcaatggtggcattttgagttctagtacaccctctaggaattgcaccacctcgcccattgttggtcgatcaaactcactgtcttgaatacaccaacatgcaattttgcaaactctttcagcctcctcgagattcacatcaccatgcaattttgcatccaccagatttccaatccctccattgataagctggcgggcgacttgcattggaaaataggccgaatggtcaccatccttgaaatattcttgacttgagttcctccttcctgataagatttcaaacaaaaccattccatagctgtaaacatcaactttagctgtaacaactgttccgctaatccattcaggggcaagatatccaatcgttcctctcattgtagtcagagcatgactaaattctctccccaaaatctttgccattccaaaatcagcaattttaggaacgaaagattcattgagaagtatgttctctggcttgatatcacaatgtataatgcaatctcgacagctatcatgcaagtaggcaaggcctctagcaactccaatagctatttggtatctaagattccaatccaaaactttatcattatccttaaatagttgcacatcaagggagccatttggcatgtattcatacacaagtaacttcttatcaccttcacaacaaagcccaatcaatttaactaaattgatgtgctggatcattccaattgaatccacttcggctctgaattgtttctccccttggcatgtgccgtcaagccttttcgctgcaatgggagttgactcatttaggtatcccttaaatacagaaccaaaactgcctcctcccaacttttctgaaaagtttttagttgcacgctgcagatcaatatatcgaaatgcagtaataccaatgctgccttgatcattttccgctccgcgagcaaacagtttcccttttctcctccaaaacatcagtagaaggatcatcaaacagaaagcagcagtgcttgcaccaatggcaacaccaatgatgactccactctttttcttcctttccgcactttgcacctcatgcacctcatttgcagcaaggcgaatgtaaaagttatcaccatttccgacagcagaagcatcagactgttgccttacgttgtacagctcatcatgccaaacagagcatccacctttcccataggaatatgcagtacaggagcagttgctcaagcaaacatctgagcattcatctttacttgcagcttcctgcacatgcatggcattacggggcaatataatgttttgcacatagtagaacttatcgctgaaacctgtcttgttcatagtactaccacaatttaatggagtattcctcatacaccctcctgttcgatcttctatctcccaatccttgggtgatcttatagagaagcccttcatacagtcgcagaacggatcattgttgtcattgcagactgtaaaaggtccacagattgcgtaaacatcgcaatgaagtaagggcatcctgtaattgatcaaccaatcctgcaagctgtccaaccatacacctgccaaacctcgcccgttgacatctattgcggcatgcgtaattgccttctcattgttcagagtatatgtgaggtaaacctctctgtcattgttgacaaatgtgaaattgggtatggtggcaccaaacatctctggtgctgagccaaaaaattgcccattccaatccccactggaccaatatgttacagttgagttccataccaaatgaccaacaccattgatatcaaattccaaagagtacaaaccagcagcctggtcaattgaattcttcctagaaacaaggcggcggttcaggccagtcaccttgttccagccgatcttcgcatcggcaaaaaggctatctgttgggtagtcgaagctctgccagaaaaccatggatgagtttgatgaactctgcagcacaagattaccatcgttcaacagcacaacaacggtgccgttggttgtggtgttaacacgggtagaccatatgatggacttggtagcctggtccatgatgaccatgtttccgtcgccggatattgttagctccggtgaagcggggcccaccactgggttttcgccattggcggaccacagtggagttatcatggggagcttgttgtaccatatgcaaaggtaagagttgcggctggtgtaggaggagttcttactgtccatcttgaagaagccgagagcgaacttgctgttgttggagataagcctgtcaccgccggccagtgtttggccgggtgacaccgtgtccgtagtggcatagctcgtcggagggtgcagggagagtaggaggaggaagccaagaaggacagacat
More
|
||||||||||
| CDS seq | atgtctgtccttcttggcttcctcctcctactctccctgcaccctccgacgagctatgccactacggacacggtgtcacccggccaaacactggccggcggtgacaggcttatctccaacaacagcaagttcgctctcggcttcttcaagatggacagtaagaactcctcctacaccagccgcaactcttacctttgcatatggtacaacaagctccccatgataactccactgtggtccgccaatggcgaaaacccagtggtgggccccgcttcaccggagctaacaatatccggcgacggaaacatggtcatcatggaccaggctaccaagtccatcatatggtctacccgtgttaacaccacaaccaacggcaccgttgttgtgctgttgaacgatggtaatcttgtgctgcagagttcatcaaactcatccatggttttctggcagagcttcgactacccaacagatagcctttttgccgatgcgaagatcggctggaacaaggtgactggcctgaaccgccgccttgtttctaggaagaattcaattgaccaggctgctggtttgtactctttggaatttgatatcaatggtgttggtcatttggtatggaactcaactgtaacatattggtccagtggggattggaatgggcaattttttggctcagcaccagagatgtttggtgccaccatacccaatttcacatttgtcaacaatgacagagaggtttacctcacatatactctgaacaatgagaaggcaattacgcatgccgcaatagatgtcaacgggcgaggtttggcaggtgtatggttggacagcttgcaggattggttgatcaattacaggatgcccttacttcattgcgatgtttacgcaatctgtggaccttttacagtctgcaatgacaacaatgatccgttctgcgactgtatgaagggcttctctataagatcacccaaggattgggagatagaagatcgaacaggagggtgtatgaggaatactccattaaattgtggtagtactatgaacaagacaggtttcagcgataagttctactatgtgcaaaacattatattgccccgtaatgccatgcatgtgcaggaagctgcaagtaaagatgaatgctcagatgtttgcttgagcaactgctcctgtactgcatattcctatgggaaaggtggatgctctgtttggcatgatgagctgtacaacgtaaggcaacagtctgatgcttctgctgtcggaaatggtgataacttttacattcgccttgctgcaaatgaggtgcatgaggtgcaaagtgcggaaaggaagaaaaagagtggagtcatcattggtgttgccattggtgcaagcactgctgctttctgtttgatgatccttctactgatgttttggaggagaaaagggaaactgtttgctcgcggagcggaaaatgatcaaggcagcattggtattactgcatttcgatatattgatctgcagcgtgcaactaaaaacttttcagaaaagttgggaggaggcagttttggttctgtatttaagggatacctaaatgagtcaactcccattgcagcgaaaaggcttgacggcacatgccaaggggagaaacaattcagagccgaagtggattcaattggaatgatccagcacatcaatttagttaaattgattgggctttgttgtgaaggtgataagaagttacttgtgtatgaatacatgccaaatggctcccttgatgtgcaactatttaaggataatgataaagttttggattggaatcttagataccaaatagctattggagttgctagaggccttgcctacttgcatgatagctgtcgagattgcattatacattgtgatatcaagccagagaacatacttctcaatgaatctttcgttcctaaaattgctgattttggaatggcaaagattttggggagagaatttagtcatgctctgactacaatgagaggaacgattggatatcttgcccctgaatggattagcggaacagttgttacagctaaagttgatgtttacagctatggaatggttttgtttgaaatcttatcaggaaggaggaactcaagtcaagaatatttcaaggatggtgaccattcggcctattttccaatgcaagtcgcccgccagcttatcaatggagggattggaaatctggtggatgcaaaattgcatggtgatgtgaatctcgaggaggctgaaagagtttgcaaaattgcatgttggtgtattcaagacagtgagtttgatcgaccaacaatgggcgaggtggtgcaattcctagagggtgtactagaactcaaaatgccaccattgccaagactactgaatgctatcacaggaggctcacattcaacaccactgtcatctttagatttaccgtaa
More
|
||||||||||
| Protein seq | MSVLLGFLLLLSLHPPTSYATTDTVSPGQTLAGGDRLISNNSKFALGFFKMDSKNSSYTSRNSYLCIWYNKLPMITPLWSANGENPVVGPASPELTISGDGNMVIMDQATKSIIWSTRVNTTTNGTVVVLLNDGNLVLQSSSNSSMVFWQSFDYPTDSLFADAKIGWNKVTGLNRRLVSRKNSIDQAAGLYSLEFDINGVGHLVWNSTVTYWSSGDWNGQFFGSAPEMFGATIPNFTFVNNDREVYLTYTLNNEKAITHAAIDVNGRGLAGVWLDSLQDWLINYRMPLLHCDVYAICGPFTVCNDNNDPFCDCMKGFSIRSPKDWEIEDRTGGCMRNTPLNCGSTMNKTGFSDKFYYVQNIILPRNAMHVQEAASKDECSDVCLSNCSCTAYSYGKGGCSVWHDELYNVRQQSDASAVGNGDNFYIRLAANEVHEVQSAERKKKSGVIIGVAIGASTAAFCLMILLLMFWRRKGKLFARGAENDQGSIGITAFRYIDLQRATKNFSEKLGGGSFGSVFKGYLNESTPIAAKRLDGTCQGEKQFRAEVDSIGMIQHINLVKLIGLCCEGDKKLLVYEYMPNGSLDVQLFKDNDKVLDWNLRYQIAIGVARGLAYLHDSCRDCIIHCDIKPENILLNESFVPKIADFGMAKILGREFSHALTTMRGTIGYLAPEWISGTVVTAKVDVYSYGMVLFEILSGRRNSSQEYFKDGDHSAYFPMQVARQLINGGIGNLVDAKLHGDVNLEEAERVCKIACWCIQDSEFDRPTMGEVVQFLEGVLELKMPPLPRLLNAITGGSHSTPLSSLDLP |
||||||||||
| Function | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [UniProtKB/Swiss-Prot:O64477] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_10g0007010 | OsLiXu_10g0007010.01 | Chr10 | 11663642 | 11666579 | - | NAM | ||
| CDS seq | atgtctgtccttcttggcttcctcctcctactctccctgcaccctccgacgagctatgccactacggacacggtgtcacccggccaaacactggccggcggtgacaggcttatctccaacaacagcaagttcgctctcggcttcttcaagatggacagtaagaactcctcctacaccagccgcaactcttacctttgcatatggtacaacaagctccccatgataactccactgtggtccgccaatggcgaaaacccagtggtgggccccgcttcaccggagctaacaatatccggcgacggaaacatggtcatcatggaccaggctaccaagtccatcatatggtctacccgtgttaacaccacaaccaacggcaccgttgttgtgctgttgaacgatggtaatcttgtgctgcagagttcatcaaactcatccatggttttctggcagagcttcgactacccaacagatagcctttttgccgatgcgaagatcggctggaacaaggtgactggcctgaaccgccgccttgtttctaggaagaattcaattgaccaggctgctggtttgtactctttggaatttgatatcaatggtgttggtcatttggtatggaactcaactgtaacatattggtccagtggggattggaatgggcaattttttggctcagcaccagagatgtttggtgccaccatacccaatttcacatttgtcaacaatgacagagaggtttacctcacatatactctgaacaatgagaaggcaattacgcatgccgcaatagatgtcaacgggcgaggtttggcaggtgtatggttggacagcttgcaggattggttgatcaattacaggatgcccttacttcattgcgatgtttacgcaatctgtggaccttttacagtctgcaatgacaacaatgatccgttctgcgactgtatgaagggcttctctataagatcacccaaggattgggagatagaagatcgaacaggagggtgtatgaggaatactccattaaattgtggtagtactatgaacaagacaggtttcagcgataagttctactatgtgcaaaacattatattgccccgtaatgccatgcatgtgcaggaagctgcaagtaaagatgaatgctcagatgtttgcttgagcaactgctcctgtactgcatattcctatgggaaaggtggatgctctgtttggcatgatgagctgtacaacgtaaggcaacagtctgatgcttctgctgtcggaaatggtgataacttttacattcgccttgctgcaaatgaggtgcatgaggtgcaaagtgcggaaaggaagaaaaagagtggagtcatcattggtgttgccattggtgcaagcactgctgctttctgtttgatgatccttctactgatgttttggaggagaaaagggaaactgtttgctcgcggagcggaaaatgatcaaggcagcattggtattactgcatttcgatatattgatctgcagcgtgcaactaaaaacttttcagaaaagttgggaggaggcagttttggttctgtatttaagggatacctaaatgagtcaactcccattgcagcgaaaaggcttgacggcacatgccaaggggagaaacaattcagagccgaagtggattcaattggaatgatccagcacatcaatttagttaaattgattgggctttgttgtgaaggtgataagaagttacttgtgtatgaatacatgccaaatggctcccttgatgtgcaactatttaaggataatgataaagttttggattggaatcttagataccaaatagctattggagttgctagaggccttgcctacttgcatgatagctgtcgagattgcattatacattgtgatatcaagccagagaacatacttctcaatgaatctttcgttcctaaaattgctgattttggaatggcaaagattttggggagagaatttagtcatgctctgactacaatgagaggaacgattggatatcttgcccctgaatggattagcggaacagttgttacagctaaagttgatgtttacagctatggaatggttttgtttgaaatcttatcaggaaggaggaactcaagtcaagaatatttcaaggatggtgaccattcggcctattttccaatgcaagtcgcccgccagcttatcaatggagggattggaaatctggtggatgcaaaattgcatggtgatgtgaatctcgaggaggctgaaagagtttgcaaaattgcatgttggtgtattcaagacagtgagtttgatcgaccaacaatgggcgaggtggtgcaattcctagagggtgtactagaactcaaaatgccaccattgccaagactactgaatgctatcacaggaggctcacattcaacaccactgtcatctttagatttaccgtaa
More
|
|||||||
| Protein seq | MSVLLGFLLLLSLHPPTSYATTDTVSPGQTLAGGDRLISNNSKFALGFFKMDSKNSSYTSRNSYLCIWYNKLPMITPLWSANGENPVVGPASPELTISGDGNMVIMDQATKSIIWSTRVNTTTNGTVVVLLNDGNLVLQSSSNSSMVFWQSFDYPTDSLFADAKIGWNKVTGLNRRLVSRKNSIDQAAGLYSLEFDINGVGHLVWNSTVTYWSSGDWNGQFFGSAPEMFGATIPNFTFVNNDREVYLTYTLNNEKAITHAAIDVNGRGLAGVWLDSLQDWLINYRMPLLHCDVYAICGPFTVCNDNNDPFCDCMKGFSIRSPKDWEIEDRTGGCMRNTPLNCGSTMNKTGFSDKFYYVQNIILPRNAMHVQEAASKDECSDVCLSNCSCTAYSYGKGGCSVWHDELYNVRQQSDASAVGNGDNFYIRLAANEVHEVQSAERKKKSGVIIGVAIGASTAAFCLMILLLMFWRRKGKLFARGAENDQGSIGITAFRYIDLQRATKNFSEKLGGGSFGSVFKGYLNESTPIAAKRLDGTCQGEKQFRAEVDSIGMIQHINLVKLIGLCCEGDKKLLVYEYMPNGSLDVQLFKDNDKVLDWNLRYQIAIGVARGLAYLHDSCRDCIIHCDIKPENILLNESFVPKIADFGMAKILGREFSHALTTMRGTIGYLAPEWISGTVVTAKVDVYSYGMVLFEILSGRRNSSQEYFKDGDHSAYFPMQVARQLINGGIGNLVDAKLHGDVNLEEAERVCKIACWCIQDSEFDRPTMGEVVQFLEGVLELKMPPLPRLLNAITGGSHSTPLSSLDLP
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.062738 | 0.0 | 0.137252 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0342300 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g20160 | RBH | 0.0 | 0.097743 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0342300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0007310 | RBH | 0.0 | 0.680233 | 0.215150 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0007330 | RBH | 0.043725 | 0.730856 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0007050 | RBH | 0.0 | 0.758836 | 1.014106 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0007510 | RBH | 0.0 | 0.040088 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0007380 | RBH | 0.565139 | 1.175322 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0179300 | RBH | 0.171659 | 0.973075 | 0.272009 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0007340 | RBH | 0.062023 | 0.068546 | 0.105338 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0190100 | RBH | 0.223942 | 1.562616 | 1.6259275 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0007100 | RBH | 0.0 | 0.041344 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0007110 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0007600 | RBH | 0.0 | 4.269874 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0006970 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0007680 | RBH | 0.0 | 0.471977 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G007320 | RBH | 0.0 | 1.210929 | 0.120777 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0007350 | RBH | 0.0 | 0.0 | 1.610918 |
