Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_10g0005970 | OGI:10029650 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr10:9811963-9812556 | ||||||||
| Gene Symbol | CYP75B4, OsCYP75B4, OsC5'H, C5'H | ||||||||||
| DNA seq | atggcagagctgattcgacacccagatatcctcaagcaggccCaagaggagctagatgttgttgttggtcgtgataggctcctctcagagtcggatctatcacatctcaccttcttccatgctatcatcaaggagacattccgtcttcatccatcaaccccgctctcgctgccacgcatggcatctgaggagtgtgagatcgcaggctaccgtatccccaagggtgcagagttgctggtcaatgtgtgggggatcgcccgtgacccagccatatggcctgacccactagagtacaagccctctcggttcctccccggtgggacgcacactgatgtggatgtcaagggaaatgatttcggacttataccattcggtgcagggcgaaggatatgcgccggcctcagttggggcctgcggatggtcaccatgacagcggccacgctggtgcatgcattcgactggcagctaccagcggaccagacgccagacaagctcaatatggatgaggcgtttaccctcctgctgcaaagggcagagccattggtggttcacccggtaccaaggcttctcccatccgcttacaatattgcataa
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| CDS seq | atggcagagctgattcgacacccagatatcctcaagcaggccCaagaggagctagatgttgttgttggtcgtgataggctcctctcagagtcggatctatcacatctcaccttcttccatgctatcatcaaggagacattccgtcttcatccatcaaccccgctctcgctgccacgcatggcatctgaggagtgtgagatcgcaggctaccgtatccccaagggtgcagagttgctggtcaatgtgtgggggatcgcccgtgacccagccatatggcctgacccactagagtacaagccctctcggttcctccccggtgggacgcacactgatgtggatgtcaagggaaatgatttcggacttataccattcggtgcagggcgaaggatatgcgccggcctcagttggggcctgcggatggtcaccatgacagcggccacgctggtgcatgcattcgactggcagctaccagcggaccagacgccagacaagctcaatatggatgaggcgtttaccctcctgctgcaaagggcagagccattggtggttcacccggtaccaaggcttctcccatccgcttacaatattgcataa
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| Protein seq | MAELIRHPDILKQAQEELDVVVGRDRLLSESDLSHLTFFHAIIKETFRLHPSTPLSLPRMASEECEIAGYRIPKGAELLVNVWGIARDPAIWPDPLEYKPSRFLPGGTHTDVDVKGNDFGLIPFGAGRRICAGLSWGLRMVTMTAATLVHAFDWQLPADQTPDKLNMDEAFTLLLQRAEPLVVHPVPRLLPSAYNIA |
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| Function | Flavonoid 3'-monooxygenase CYP75B4 [UniProtKB/Swiss-Prot:Q8LM92] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_10g0005970 | OsLiXu_10g0005970.01 | Chr10 | 9811963 | 9812556 | + | NAM | ||
| CDS seq | atggcagagctgattcgacacccagatatcctcaagcaggccCaagaggagctagatgttgttgttggtcgtgataggctcctctcagagtcggatctatcacatctcaccttcttccatgctatcatcaaggagacattccgtcttcatccatcaaccccgctctcgctgccacgcatggcatctgaggagtgtgagatcgcaggctaccgtatccccaagggtgcagagttgctggtcaatgtgtgggggatcgcccgtgacccagccatatggcctgacccactagagtacaagccctctcggttcctccccggtgggacgcacactgatgtggatgtcaagggaaatgatttcggacttataccattcggtgcagggcgaaggatatgcgccggcctcagttggggcctgcggatggtcaccatgacagcggccacgctggtgcatgcattcgactggcagctaccagcggaccagacgccagacaagctcaatatggatgaggcgtttaccctcctgctgcaaagggcagagccattggtggttcacccggtaccaaggcttctcccatccgcttacaatattgcataa
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| Protein seq | MAELIRHPDILKQAQEELDVVVGRDRLLSESDLSHLTFFHAIIKETFRLHPSTPLSLPRMASEECEIAGYRIPKGAELLVNVWGIARDPAIWPDPLEYKPSRFLPGGTHTDVDVKGNDFGLIPFGAGRRICAGLSWGLRMVTMTAATLVHAFDWQLPADQTPDKLNMDEAFTLLLQRAEPLVVHPVPRLLPSAYNIA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.241811 | 0.0 | 3.272428 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0317900 | RBH | 1.141350 | 2.938588 | 18.410574 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g16974 | RBH | 0.925834 | 0.766584 | 4.515895 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0317900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0006180 | RBH | 0.093723 | 52.790981 | 44.664318 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0006080 | RBH | 0.300152 | 10.132455 | 11.091230 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0005940 | RBH | 0.0 | 42.644650 | 49.456856 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0006370 | RBH | 0.0 | 1.716909 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0006060 | RBH | 3.006103 | 34.127327 | 121.650742 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0151800 | SBH | 2.6478085 | 10.2286115 | 0.272026 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0006230 | RBH | 0.221314 | 2.938328 | 8.142011 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0163100 | RBH | 39.2686195 | 1.41408 | 1.723209 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0006050 | RBH | 0.000000 | 0.119243 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0006100 | RBH | 0.356571 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0006280 | RBH | 2.328078 | 30.836065 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0059040 | RBH | 0.300305 | 0.0 | 3.453635 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0006370 | RBH | 0.0 | 5.721237 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G006160 | RBH | 0.000000 | 8.702750 | 17.081909 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0006280 | RBH | 0.0 | 26.576794 | 42.323956 |
