Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_10g0001550 | OGI:10007600 | 14/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr10:2463337-2469262 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcatttatttgagcggtttgcttcctcttctcttggtttagcttctctgaggcgcacccctttgagatttcctagcgtgtcaatgccaaatagccttcaaacgcttgaaactgcatctcaatcatctcaagggctggcattgcattgtgacagaagcctagctttggaacaagaggtgcaaagaagcgaagtagcttaagactcttgaatccttcacctggaacaaagatctccccatcggacagtgatttgttgtcctcgatgatgtccttcatctttttgtcctgatccttctccatctcaccaaatgagaaagaaaaggtaagagaaaacAgcggcagggcacggaggtgctctagagtatctgtccggagaactgttagagacagagttagcttgctcaatgtccgtagtgtcttgatccaacctgggggttttttcaacatgccggaaagctcaagggcaacaagatatcttgggggtgcggacatgttacccaaggagttgataaaattagattgaccttcctcattgatcgccaaagtctggagaccacagctgcaaagatactcaatagaagagcgtagttctgtcaagattttccttgtgcccggttcctctgggttgagcttgagcttgtaaatagtaagcttctttagacccgtcaattgatgaaggcctgctacagctgttgtctcatcgatcttgatcccagacagtatccggagtgctttcattccttccttctctttatcttgggtcaacatacttttgtgttgctgcttcttacttttttcttgaggcagcctcaaccctttccgtggGtttttgtttttactcccaccaagtattctgctgattagttttagctgctctacttctttcggcagctctttaacacgtgtttctcttatgtcaagagtttccaaatactcgagcttcacaatcgtcggcggaacatgggtaatatccgtccctcggaggctcaaatacttcagcacaaacatcttacaaatgtgtttcatatgcctgttcttgaatcccttcagtccttgaaaatccaggacttgtattattctgtcattgaaagcatggaatggaagctgggtgaggctcccgaaaacggtcagtgaccgaacttgtgacagattcatgccttttgttgaatctccatgcttggaactgctgctctgcatggaaagccgacggactttgttattactggtgctatcatcatcagatgaccaccaaccacagtaataaattctcttctcttgccttggtcacaatatagtcaagaaccatgtcatgaacttgaaaggtttttagtttcccgttgctgctgtgctccacaggacgtatcaactttcttcttaaaatatgattgaagtatgattccgcaacttcctccgccgtcagcccttgctttgcattgacaaaccttcagcaatccatcgcctggacagacacttcctactaattttccaaccctttggaaatattgccaagtacagtaagcaggttctgagatatccaggcaaattattgtagcaacaatcaagtatccttgtaaccccatccaaattgagagaagtttcttgttcctgagccccagcagtaatagaaacctcttctggcaataatttgtgaagtccagcccagtaactctttggctggtcttggttgcacgccactagaccagccatggtaactatggccaaaggctgacccccacaccttttccataaatcaccagggacattgttctgtaccttgtgtctatctttggtgcttttggattcagaaacacttcggttgaatagctccttggaatcacgaggactgaggaaactaatcggatacaatagatccttgttttctggccggcagcaggtcgaaccaaccgcttgaaatcttgaagtaactattattctactgcgctctttattatcagttagcaacaaataatctgatattgttttccatgtttttgcagaccatatgtcgtcaaccaggattatacctggcaacaaaaagaagacgacaatgtgaggtagacgaagagtccatcatccagtaacaagcttataaattgaaaactacaaacatacataatgtgccaccacgtacacaaaataataaggaataaagcaaatgattaaactaactagtagcccgcgtgcgcagacatgcatcacacggtaagtttgagatacttataagagcaaaatattaaccggagaacatctaccatgatttctctgtaaattgttttcatcagcattaattgcttttataattttctaacctctgaactttatattatatcatatttaagtaatatctatgagcaattatttataatcgtcttcatcatttaaaaagaaggtagattttttctttagaaaacatgccaatgaaaagtaagtgtaaagtaaactaaggtatttttctttattttaattgcatatattatcatggtttattcgaggatgaattgggtgggacaggaagctccactaaaagtggatcaatttatatagcctaatatgattgatgtagtttgagaaactactataaaacttcaaatagatgttgacactataggtgctagaaatattacaaccggcacctataaaacttttcccaactctgcggagtgacaaatagaaaacccacaccttttagtaactacatgtgccggttctaaagaaaaccggcacctatatcataagtgctggttttttaaactaaaacggtacctacatagaggttaaaagtgccggtttataaaaaaccggaactttaatagagacgagcgaggatttttttctagtccttatcttctcccgcacctcccaccaccgctcattctctgtctcgcctttcccctcacctttcccctcctcctcctcccatttcccctcacctccttctctacctcctccaccggcagcgacagtgtgggaaggccactgccatctcctcctcgttccttcccaccagccaccggcgctcgcgggtggccagatccggcccgctgctcctcccctccgtcccaccccttcccattagcgctcagagcggctagatccggcacgcccgcccccccaccccactggtgctagggggtggctagatccggcacccccaccacaccggcgctcatcggcggccagatccggcaccgttgctcctcctctccgtcccccccttcccatcggcactcggagcgggcagatctggcaccccccccaccacaccggtgctcaagggcggccagatccggcgtagccgctccaactctctatcccaccctcatcccatcagcgctccaggcagccaaatctggcgccgccctgaccaccggagcttggggGcggccagatccgacggtggtggtggaggaggccgggtgtagtggacgttggcggaggtggaggctgagcgtggtaggaggcccccacgaaggtgcagtgggctgcctccttgattgatttttgattttgtggtgtttttgaatgtgttgttggatggcgagcaacagaaatgtgttgttgttgttgttgattcactactgtctctttttgttgttgttggGtggatggtgagattgtgagaaatgttgttgttgatgttgatggatgtgttcttggatttgggtgatggggagttgcacgatgcacaatattttatatttacacaaaaaaattgaataagacaaatggtcaaacgttggttaaaaagccaacgacgttatacattaaatacggagggaagtacgatgtatacatacaactattcacgggattttttttattcggggggttacatgggatatattttaaataaatctaatctaatggtttaaaaatagcgggatccgccaccgccgtcgtctcctgttcgggatccgcgccagccgtcctccgccgccttgtcgctcgccttcgccaggccgcgacggcgcagacgctccgggcgcagctcctgccgtcggcggcttggcgagttcctgacttcatcgcagccccactgctgcggcggcggcgggtaggaaccaccgaggctgacgaggccgtgcagactgcgactgaggtgagagggcttgcttccccatccccctcagagggtgatttgtgcattttgctgcacaccacatgtttttttgttgcacatagtgtgtccatgatgttgcaatccgtatttttctggatgtttcttaaatcaatactggatgttgcatttggtctcttcgggatgttgcatatattggttttttgttgttgcagacaatgttttttagtgttgcattcgattgaaacatgttcgataatgcggtgaaacatcttcgataaagcagtgaaacattcctcaaagataaaacatcaagaaacaattcgtgttgaaacatttttttttgagcaatgaaacattgcaacattcattcaacatactgtgaacatcgtctaggagatttcacgttgaaacattttttttcgagcgatgaaacattgcaacattatttaatatacagtgaaacatcgtccagagatttgcaaatctccggacgtccgatccatagctttccccctatttttttcttccggctaacagtaggaagctttatttgattttttttcgattgtattaacgtacatatatttatgttctctttccttttcccagccaccagttaaatatgttatttggagaaaaaactatcacctttttaataatagatctaatctaacggtctaaagtatcatgtccatcaattaaataaaatcgacggtgagattagatagtgccatgtggcggtctagaagtctttgtaggagcaccacgtggcggtttgagagctagcgtttgtagaaagtttaatgaacttttagtatatagatatagatatagatgtagatagatggatggatggatgtacacacctctttttatccaggagcttctttatttggctttcgagtttgttgtcggtggtttctgtgcgctttagattggaggtctcctcaatactgcgagggctgctttgacggagacttcctgtgcgctgcacgtctcgcttcaatttgcttccaaagcgtgccagtgtcttgatattctcagaggttccagtcttgctgctgcattgctgcctgtaatctgggtctatttgcttgagaatatcattgagtacggcatcaaggtcatagttctgggacacagtaacccacgcccggcaatcaaattgatacatgactttcttgtacaatgccatggcaatggtggtcttccccacacccccaaatccaacaatggacacaacagcaggctcctgacaagcagtgccgtccacccactcctcaagatccttcatggccttctccatccctacaggctcattcataccaagctcatggcttgcgagctgatcctcagcaatgtcataagacgtcgcatcgggcgggcccttgcctttttgggtatttggattttccactccgtatcttatgcgtcggtcagcaatcagctgcgcccggaccttaagctcagcaatactggatgcaatctcacggcgaggcccgaacgtccagaggtcatacactagtgtgactatccaggggcagcattttgcatccaaggaatcgttggggaggcggtgagcaaagtcatctatgcagtcctcacagtcatatgccatgtcgcggatctgcttcatccagtgcttcttcctgttgtcagggtcttcccgggcgaggtcaagaaggaaggccttcatgctggcgagctcgtcactgatgtactggatgtcaccacggacgcccctgatcagatcatactcctgggcgagaaggttgcccagcttgcccaggagagagtccatggtggcagtcgaagcaccaaccaccaactccatcttcgtgttctt
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| CDS seq | atggagttggtggttggtgcttcgactgccaccatggactctctcctgggcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtgacatccagtacatcagtgacgagctcgccagcatgaaggccttccttcttgacctcgcccgggaagaccctgacaacaggaagaagcactggatgaagcagatccgcgacatggcatatgactgtgaggactgcatagatgactttgctcaccgcctccccaacgattccttggatgcaaaatgctgcccctggatagtcacactagtgtatgacctctggacgttcgggcctcgccgtgagattgcatccagtattgctgagcttaaggtccgggcgcagctgattgctgaccgacgcataagatacggagtggaaaatccaaatacccaaaaaggcaagggcccgcccgatgcgacgtcttatgacattgctgaggatcagctcgcaagccatgagcttggtatgaatgagcctgtagggatggagaaggccatgaaggatcttgaggagtgggtggacggcactgcttgtcaggagcctgctgttgtgtccattgttggatttgggggtgtggggaagaccaccattgccatggcattgtacaagaaagtcatgtatcaatttgattgccgggcgtgggttactgtgtcccagaactatgaccttgatgccgtactcaatgatattctcaagcaaatagacccagattacaggcagcaatgcagcagcaagactggaacctctgagaatatcaagacactggcacgctttggaagcaaattgaagcgagacgtgcagcgcacaggaagtataatcctggttgacgacatatggtctgcaaaaacatggaaaacaatatcagattatttgttgctaactgataataaagagcgcagtagaataatagttacttcaagatttcaagcggttggttcgacctgctgccggccagaaaacaaggatctattgtatccgattagtttcctcagtcctcgtgattccaaggagctattcaaccgaagtgtttctgaatccaaaagcaccaaagatagacacaaggtacagaacaatgtccctggtgatttatggaaaaggtgtgggggtcagcctttggccatagttaccatggctggtctagtggcgtgcaaccaagaccagccaaagagttactgggctggacttcacaaattattgccagaagagagcagcagttccaagcatggagattcaacaaaaggcatgaatctgtcacaagttcggtcactgaccgttttcgggagcctcacccagcttccattccatgctttcaatgacagaataatacaagtcctggattttcaaggactgaagggattcaagaacaggcatatgaaacacatttgtaagatgtttgtgctgaagtatttgagcctccgagggacggatattacccatgttccgccgacgattgtgaagctcgagtatttggaaactcttgacataagagaaacacgtgttaaagagctgccgaaagaagtagagcagctaaaactaatcagcagaatacttggtgggagtaaaaacaaaaaCccacggaaagggttgaggctgcctcaagaaaaaagtaagaagcagcaacacaaaagtatgttgacccaagataaagagaaggaaggaatgaaagcactccggatactgtctgggatcaagatcgatgagacaacagctgtagcaggccttcatcaattgacgggtctaaagaagcttactatttacaagctcaagctcaacccagaggaaccgggcacaaggaaaatcttgacagaactacgctcttctattgagtatctttgcagctgtggtctccagactttggcgatcaatgaggaaggaaatctcaaaggggtgcgcctcagagaagctaaaccaagagaagaggaagcaaaccgctcaaataaatga
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| Protein seq | MELVVGASTATMDSLLGKLGNLLAQEYDLIRGVRGDIQYISDELASMKAFLLDLAREDPDNRKKHWMKQIRDMAYDCEDCIDDFAHRLPNDSLDAKCCPWIVTLVYDLWTFGPRREIASSIAELKVRAQLIADRRIRYGVENPNTQKGKGPPDATSYDIAEDQLASHELGMNEPVGMEKAMKDLEEWVDGTACQEPAVVSIVGFGGVGKTTIAMALYKKVMYQFDCRAWVTVSQNYDLDAVLNDILKQIDPDYRQQCSSKTGTSENIKTLARFGSKLKRDVQRTGSIILVDDIWSAKTWKTISDYLLLTDNKERSRIIVTSRFQAVGSTCCRPENKDLLYPISFLSPRDSKELFNRSVSESKSTKDRHKVQNNVPGDLWKRCGGQPLAIVTMAGLVACNQDQPKSYWAGLHKLLPEESSSSKHGDSTKGMNLSQVRSLTVFGSLTQLPFHAFNDRIIQVLDFQGLKGFKNRHMKHICKMFVLKYLSLRGTDITHVPPTIVKLEYLETLDIRETRVKELPKEVEQLKLISRILGGSKNKNPRKGLRLPQEKSKKQQHKSMLTQDKEKEGMKALRILSGIKIDETTAVAGLHQLTGLKKLTIYKLKLNPEEPGTRKILTELRSSIEYLCSCGLQTLAINEEGNLKGVRLREAKPREEEANRSNK |
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| Function | Disease resistance protein Piks-2 [UniProtKB/Swiss-Prot:P0DO10] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_10g0001550 | OsLiXu_10g0001550.01 | Chr10 | 2463337 | 2469262 | - | NAM | ||
| CDS seq | atggagttggtggttggtgcttcgactgccaccatggactctctcctgggcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtgacatccagtacatcagtgacgagctcgccagcatgaaggccttccttcttgacctcgcccgggaagaccctgacaacaggaagaagcactggatgaagcagatccgcgacatggcatatgactgtgaggactgcatagatgactttgctcaccgcctccccaacgattccttggatgcaaaatgctgcccctggatagtcacactagtgtatgacctctggacgttcgggcctcgccgtgagattgcatccagtattgctgagcttaaggtccgggcgcagctgattgctgaccgacgcataagatacggagtggaaaatccaaatacccaaaaaggcaagggcccgcccgatgcgacgtcttatgacattgctgaggatcagctcgcaagccatgagcttggtatgaatgagcctgtagggatggagaaggccatgaaggatcttgaggagtgggtggacggcactgcttgtcaggagcctgctgttgtgtccattgttggatttgggggtgtggggaagaccaccattgccatggcattgtacaagaaagtcatgtatcaatttgattgccgggcgtgggttactgtgtcccagaactatgaccttgatgccgtactcaatgatattctcaagcaaatagacccagattacaggcagcaatgcagcagcaagactggaacctctgagaatatcaagacactggcacgctttggaagcaaattgaagcgagacgtgcagcgcacaggaagtataatcctggttgacgacatatggtctgcaaaaacatggaaaacaatatcagattatttgttgctaactgataataaagagcgcagtagaataatagttacttcaagatttcaagcggttggttcgacctgctgccggccagaaaacaaggatctattgtatccgattagtttcctcagtcctcgtgattccaaggagctattcaaccgaagtgtttctgaatccaaaagcaccaaagatagacacaaggtacagaacaatgtccctggtgatttatggaaaaggtgtgggggtcagcctttggccatagttaccatggctggtctagtggcgtgcaaccaagaccagccaaagagttactgggctggacttcacaaattattgccagaagagagcagcagttccaagcatggagattcaacaaaaggcatgaatctgtcacaagttcggtcactgaccgttttcgggagcctcacccagcttccattccatgctttcaatgacagaataatacaagtcctggattttcaaggactgaagggattcaagaacaggcatatgaaacacatttgtaagatgtttgtgctgaagtatttgagcctccgagggacggatattacccatgttccgccgacgattgtgaagctcgagtatttggaaactcttgacataagagaaacacgtgttaaagagctgccgaaagaagtagagcagctaaaactaatcagcagaatacttggtgggagtaaaaacaaaaaCccacggaaagggttgaggctgcctcaagaaaaaagtaagaagcagcaacacaaaagtatgttgacccaagataaagagaaggaaggaatgaaagcactccggatactgtctgggatcaagatcgatgagacaacagctgtagcaggccttcatcaattgacgggtctaaagaagcttactatttacaagctcaagctcaacccagaggaaccgggcacaaggaaaatcttgacagaactacgctcttctattgagtatctttgcagctgtggtctccagactttggcgatcaatgaggaaggaaatctcaaaggggtgcgcctcagagaagctaaaccaagagaagaggaagcaaaccgctcaaataaatga
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| Protein seq | MELVVGASTATMDSLLGKLGNLLAQEYDLIRGVRGDIQYISDELASMKAFLLDLAREDPDNRKKHWMKQIRDMAYDCEDCIDDFAHRLPNDSLDAKCCPWIVTLVYDLWTFGPRREIASSIAELKVRAQLIADRRIRYGVENPNTQKGKGPPDATSYDIAEDQLASHELGMNEPVGMEKAMKDLEEWVDGTACQEPAVVSIVGFGGVGKTTIAMALYKKVMYQFDCRAWVTVSQNYDLDAVLNDILKQIDPDYRQQCSSKTGTSENIKTLARFGSKLKRDVQRTGSIILVDDIWSAKTWKTISDYLLLTDNKERSRIIVTSRFQAVGSTCCRPENKDLLYPISFLSPRDSKELFNRSVSESKSTKDRHKVQNNVPGDLWKRCGGQPLAIVTMAGLVACNQDQPKSYWAGLHKLLPEESSSSKHGDSTKGMNLSQVRSLTVFGSLTQLPFHAFNDRIIQVLDFQGLKGFKNRHMKHICKMFVLKYLSLRGTDITHVPPTIVKLEYLETLDIRETRVKELPKEVEQLKLISRILGGSKNKNPRKGLRLPQEKSKKQQHKSMLTQDKEKEGMKALRILSGIKIDETTAVAGLHQLTGLKKLTIYKLKLNPEEPGTRKILTELRSSIEYLCSCGLQTLAINEEGNLKGVRLREAKPREEEANRSNK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0131800 | RBH | 0.131814 | 0.144060 | 2.396525 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g04180 | RBH | 0.091394 | 0.093373 | 0.594507 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0131800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0001620 | RBH | 0.034668 | 0.0 | 2.074577 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0001590 | RBH | 0.000000 | 1.827994 | 1.778111 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0001580 | SBH | 0.000000 | 0.000000 | 4.228623 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0001520 | RBH | 0.0 | 0.170355 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0001510 | RBH | 0.0 | 0.0 | 2.592006 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0035400 | RBH | 0.194689 | 1.6697795 | 0.5324345 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0001680 | RBH | 0.0 | 0.0 | 0.257759 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0040800 | SBH | 0.0244975 | 0.069343 | 0.007359 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0001550 | RBH | 0.081988 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0001640 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0001660 | RBH | 0.0 | 2.164637 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0055380 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0001480 | RBH | 0.278939 | 4.118855 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G001610 | RBH | 0.170460 | 5.948474 | 3.619436 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0001480 | RBH | 2.172932 | 9.453382 | 12.521183 |
