Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_09g0006960 | OGI:09034040 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr09:11970881-11973774 | ||||||||
| Gene Symbol | D305, OsD305 | ||||||||||
| DNA seq | atggccattaaaactcaatatcaagtgaagaagaactggatgggtgacccatgtttacccaaggaatctatatggactggattgcaatgtaggcaagacgggtttgaatcaaaAATaaTatccttgtaagttaatacatattgataacttctttgtcttaattttgatattttaattgaatatatagtttgtttcctgtaaaaatattaacacaaagattttcacagagacctgtcgtacagtaatttacatggtgcaatatctgctgattttgccttgcttcaatctctccgttacttgtgagtccaataaatcatattctaacttatttggttgcgctaattgtttaactggaaacattacgacttatatttcaggaatttgtcatacaacaatttgaatggatcagtacctgaatccttaacaagcttatcatcccttgttcttctgtgagtcttttcttttttggtcaccgacagaacaacctagatagtataagtacatataatttgggataattatttttcttcagagacttatcaggaaatcattttgatggtacaattcctcaagcattatgcacaaaagggtcactgaacttgaggtttgttggatgatctccactaacacagttccttctgcttctaatgaagtatcatgataccaaaagtcgtttctttcattacataatcctttcgggatcaataactttgatttttatagtgttacttcataggaagttctaaaacaatccccatagtccttccatccagtctacatcactaatctctaaattgttttcagatatgacaccaacgatggtgatccatgcaatgggaaatcaccaaagaagaaaaatatttctgtcctaacagtagctatagtgactcccatagcggcagtgttattggtatctgctatactgatcttttgtttctgccacaagaaaagaaagcaacaaatgactctaggtatataagtggatagttttcttgtcatgtttgcatatctgtgttagtcactgctcgtaacagaaaaacatgaaatttgtcaatatttctactgcgaaggtatggtccaccaatacacccctcatagtgtgcagcctactggaacctcaaactcagtaagccatgtcaacataaaaggtcacgtactgatgtccgatgaccatgaattcacatacgaggagctggtgaagataacaaacaatttctcggagtgcattggtgaaggaggttttgggcctgtatacattggtcagctacaaggcagtattcaggttgctgtcaagatgtgttcgcgaaaatcggtacatggacaaggaataagagaaTttttagcagaggtacttaattaattttatttcaacgtgtaactgtaacttgagctttcagagtgatcttaggtattttgtgggctattactagtttaactgttatcataaaggcagtcagtacattgattagcacaataaatttagcatcactttaaactatatatttaatatcttactataggaatcaggtgtgatcagcgttgtgccttacatgattatgtctcgtgttgtaggttgacagcttgaaaacagtacaccacaaatatctagtaatgtttattggatactgcacaaacaagaatcatttagccctcatttacgagtacatgccgaatggaagcctgtttgatcatataagaggtttgcactccttgcgtttttatatataaacttttaaaatgaaactctaatgataaatgaacagagttaacatgcaattaaatattcatggtattactgttcttgttttccatgagactataagacagagatattgtttatatcatatatcattgtggtaacaaatcataattatttttttaggtaaaaaggctaatgttcaaacaatgagctggctacagcgcgcaagaattgtttatgaagctgcacaaggtcaggtcgaaagtgtttcattgtattttatcttttgacatgtctttgaaacatatatattgtactatatttcatctctttttgacagtactctatatataggtctgaactacctgcattcagggtgtgtactgcctataatacacagagatgtgaagtcacacaacattctactggatgaagatatgcatgccaagatctctgattttggattgtccaagtcttacattaatgaagcacaaactcatatatcagtcactgctgctggcaccataggctacattgatccagagtttgtcaccaagcacaactacttaccttttagtactgtttgaactaactaaaaaaataaagcaagaaatcttcaatctgtaagaaatcttcattgaaactgataaaacaaaaccttttaattgctttatcatgaagagaaatgacctaatgatgtcataattgttcgcattccttagtattcaacactagttgcacattagtttttcatagcaccggctaagtactcaaatcgaccatatttttcttgtttaggtactacttcagcagcaggctcaccatgagaagtgacgtgttcagctttggagttgttctgttagagattgtaacaggtgaaccaccaattgtaccaggtgttgggcatgtggggcagcgtgtgaaacagaagattagcgacggcgacatcagtgctatcgttgacctgcgtcttgaaggtgcatacgacatgggttcggtctggaaggtcgtggacatagcactgctgtgcacaagggaggtgtctgatgataggccaacaatgacagaagtggtggagcagctgaaagatgccttggcattggaagaagctcgccatatcgatggccacagcgataatggccaaggcagcatcaagccagatttatcagccaactggggaccattggctagatga
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| CDS seq | atggccattaaaactcaatatcaagtgaagaagaactggatgggtgacccatgtttacccaaggaatctatatggactggattgcaatgtaggcaagacgggtttgaatcaaaAATaaTatccttgaatttgtcatacaacaatttgaatggatcagtacctgaatccttaacaagcttatcatcccttgttcttctagacttatcaggaaatcattttgatggtacaattcctcaagcattatgcacaaaagggtcactgaacttgagatatgacaccaacgatggtgatccatgcaatgggaaatcaccaaagaagaaaaatatttctgtcctaacagtagctatagtgactcccatagcggcagtgttattggtatctgctatactgatcttttgtttctgccacaagaaaagaaagcaacaaatgactctaggtatggtccaccaatacacccctcatagtgtgcagcctactggaacctcaaactcagtaagccatgtcaacataaaaggtcacgtactgatgtccgatgaccatgaattcacatacgaggagctggtgaagataacaaacaatttctcggagtgcattggtgaaggaggttttgggcctgtatacattggtcagctacaaggcagtattcaggttgctgtcaagatgtgttcgcgaaaatcggtacatggacaaggaataagagaaTttttagcagaggttgacagcttgaaaacagtacaccacaaatatctagtaatgtttattggatactgcacaaacaagaatcatttagccctcatttacgagtacatgccgaatggaagcctgtttgatcatataagaggtaaaaaggctaatgttcaaacaatgagctggctacagcgcgcaagaattgtttatgaagctgcacaagggtgtgtactgcctataatacacagagatgtgaagtcacacaacattctactggatgaagatatgcatgccaagatctctgattttggattgtccaagtcttacattaatgaagcacaaactcatatatcagtcactgctgctggcaccataggctacattgatccagagtactacttcagcagcaggctcaccatgagaagtgacgtgttcagctttggagttgttctgttagagattgtaacaggtgaaccaccaattgtaccaggtgttgggcatgtggggcagcgtgtgaaacagaagattagcgacggcgacatcagtgctatcgttgacctgcgtcttgaaggtgcatacgacatgggttcggtctggaaggtcgtggacatagcactgctgtgcacaagggaggtgtctgatgataggccaacaatgacagaagtggtggagcagctgaaagatgccttggcattggaagaagctcgccatatcgatggccacagcgataatggccaaggcagcatcaagccagatttatcagccaactggggaccattggctagatga
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| Protein seq | MAIKTQYQVKKNWMGDPCLPKESIWTGLQCRQDGFESKIISLNLSYNNLNGSVPESLTSLSSLVLLDLSGNHFDGTIPQALCTKGSLNLRYDTNDGDPCNGKSPKKKNISVLTVAIVTPIAAVLLVSAILIFCFCHKKRKQQMTLGMVHQYTPHSVQPTGTSNSVSHVNIKGHVLMSDDHEFTYEELVKITNNFSECIGEGGFGPVYIGQLQGSIQVAVKMCSRKSVHGQGIREFLAEVDSLKTVHHKYLVMFIGYCTNKNHLALIYEYMPNGSLFDHIRGKKANVQTMSWLQRARIVYEAAQGCVLPIIHRDVKSHNILLDEDMHAKISDFGLSKSYINEAQTHISVTAAGTIGYIDPEYYFSSRLTMRSDVFSFGVVLLEIVTGEPPIVPGVGHVGQRVKQKISDGDISAIVDLRLEGAYDMGSVWKVVDIALLCTREVSDDRPTMTEVVEQLKDALALEEARHIDGHSDNGQGSIKPDLSANWGPLAR |
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| Function | Receptor-like protein kinase At3g21340 [UniProtKB/Swiss-Prot:Q9LIG2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_09g0006960 | OsLiXu_09g0006960.01 | Chr09 | 11970881 | 11973774 | + | NAM | ||
| CDS seq | atggccattaaaactcaatatcaagtgaagaagaactggatgggtgacccatgtttacccaaggaatctatatggactggattgcaatgtaggcaagacgggtttgaatcaaaAATaaTatccttgaatttgtcatacaacaatttgaatggatcagtacctgaatccttaacaagcttatcatcccttgttcttctagacttatcaggaaatcattttgatggtacaattcctcaagcattatgcacaaaagggtcactgaacttgagatatgacaccaacgatggtgatccatgcaatgggaaatcaccaaagaagaaaaatatttctgtcctaacagtagctatagtgactcccatagcggcagtgttattggtatctgctatactgatcttttgtttctgccacaagaaaagaaagcaacaaatgactctaggtatggtccaccaatacacccctcatagtgtgcagcctactggaacctcaaactcagtaagccatgtcaacataaaaggtcacgtactgatgtccgatgaccatgaattcacatacgaggagctggtgaagataacaaacaatttctcggagtgcattggtgaaggaggttttgggcctgtatacattggtcagctacaaggcagtattcaggttgctgtcaagatgtgttcgcgaaaatcggtacatggacaaggaataagagaaTttttagcagaggttgacagcttgaaaacagtacaccacaaatatctagtaatgtttattggatactgcacaaacaagaatcatttagccctcatttacgagtacatgccgaatggaagcctgtttgatcatataagaggtaaaaaggctaatgttcaaacaatgagctggctacagcgcgcaagaattgtttatgaagctgcacaagggtgtgtactgcctataatacacagagatgtgaagtcacacaacattctactggatgaagatatgcatgccaagatctctgattttggattgtccaagtcttacattaatgaagcacaaactcatatatcagtcactgctgctggcaccataggctacattgatccagagtactacttcagcagcaggctcaccatgagaagtgacgtgttcagctttggagttgttctgttagagattgtaacaggtgaaccaccaattgtaccaggtgttgggcatgtggggcagcgtgtgaaacagaagattagcgacggcgacatcagtgctatcgttgacctgcgtcttgaaggtgcatacgacatgggttcggtctggaaggtcgtggacatagcactgctgtgcacaagggaggtgtctgatgataggccaacaatgacagaagtggtggagcagctgaaagatgccttggcattggaagaagctcgccatatcgatggccacagcgataatggccaaggcagcatcaagccagatttatcagccaactggggaccattggctagatga
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| Protein seq | MAIKTQYQVKKNWMGDPCLPKESIWTGLQCRQDGFESKIISLNLSYNNLNGSVPESLTSLSSLVLLDLSGNHFDGTIPQALCTKGSLNLRYDTNDGDPCNGKSPKKKNISVLTVAIVTPIAAVLLVSAILIFCFCHKKRKQQMTLGMVHQYTPHSVQPTGTSNSVSHVNIKGHVLMSDDHEFTYEELVKITNNFSECIGEGGFGPVYIGQLQGSIQVAVKMCSRKSVHGQGIREFLAEVDSLKTVHHKYLVMFIGYCTNKNHLALIYEYMPNGSLFDHIRGKKANVQTMSWLQRARIVYEAAQGCVLPIIHRDVKSHNILLDEDMHAKISDFGLSKSYINEAQTHISVTAAGTIGYIDPEYYFSSRLTMRSDVFSFGVVLLEIVTGEPPIVPGVGHVGQRVKQKISDGDISAIVDLRLEGAYDMGSVWKVVDIALLCTREVSDDRPTMTEVVEQLKDALALEEARHIDGHSDNGQGSIKPDLSANWGPLAR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.092477 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0355400 | SBH | 8.814496 | 8.050460 | 5.618421 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g18530 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0355400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0007040 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0007040 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0007230 | SBH | 0.000000 | 0.0 | 0.582392 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0007180 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0007260 | RBH | 0.769365 | 5.205840 | 3.758521 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0198600 | SBH | 0.526334 | 1.0165755 | 2.2173525 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0007260 | RBH | 0.036965 | 0.049152 | 0.421858 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0179500 | SBH | 0.066574 | 0 | 0.014286 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0007200 | RBH | 0.034220 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0007010 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0006950 | RBH | 0.563082 | 0.981259 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0050910 | RBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0006960 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G007570 | RBH | 0.046891 | 0.183770 | 0.529573 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0007370 | RBH | 0.152161 | 0.0 | 0.455310 |
