Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_09g0002680 | OGI:09012630 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr09:5294603-5294997 | ||||||||
| Gene Symbol | SWEET7A, OsSWEET7a, SWEET7a | ||||||||||
| DNA seq | atgtactcctcaccactcaccatcatgagtcaagttgtgaagactaagagcgtggagtacatgccattgctattgtcggtggtgagcttcctcaatggcctctgctggacatcatacgcgctcatccacttcgacatcttcatcaccatacccaatggtcttggtgtgctttttgctctcatgcaactcatcctctatgccatctactactggaccacacccaagaagccatctactaccggaccacacccaagaagcaggataagaacctcaagctgccaaccgtcgcccccgtcgccaagggcaccagcatcgtcgcccctatcagcaaggacgacgacatcaatggcagcactgccagccatgtcaccatcaatatcacggttgagccataa |
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| CDS seq | atgtactcctcaccactcaccatcatgagtcaagttgtgaagactaagagcgtggagtacatgccattgctattgtcggtggtgagcttcctcaatggcctctgctggacatcatacgcgctcatccacttcgacatcttcatcaccatacccaatggtcttgaagccatctactaccggaccacacccaagaagcaggataagaacctcaagctgccaaccgtcgcccccgtcgccaagggcaccagcatcgtcgcccctatcagcaaggacgacgacatcaatggcagcactgccagccatgtcaccatcaatatcacggttgagccataa |
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| Protein seq | MYSSPLTIMSQVVKTKSVEYMPLLLSVVSFLNGLCWTSYALIHFDIFITIPNGLEAIYYRTTPKKQDKNLKLPTVAPVAKGTSIVAPISKDDDINGSTASHVTINITVEP |
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| Function | Bidirectional sugar transporter SWEET7b [UniProtKB/Swiss-Prot:Q0J349] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_09g0002680 | OsLiXu_09g0002680.01 | Chr09 | 5294603 | 5294997 | + | NAM | ||
| CDS seq | atgtactcctcaccactcaccatcatgagtcaagttgtgaagactaagagcgtggagtacatgccattgctattgtcggtggtgagcttcctcaatggcctctgctggacatcatacgcgctcatccacttcgacatcttcatcaccatacccaatggtcttgaagccatctactaccggaccacacccaagaagcaggataagaacctcaagctgccaaccgtcgcccccgtcgccaagggcaccagcatcgtcgcccctatcagcaaggacgacgacatcaatggcagcactgccagccatgtcaccatcaatatcacggttgagccataa
More
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| Protein seq | MYSSPLTIMSQVVKTKSVEYMPLLLSVVSFLNGLCWTSYALIHFDIFITIPNGLEAIYYRTTPKKQDKNLKLPTVAPVAKGTSIVAPISKDDDINGSTASHVTINITVEP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0254600 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g08030 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0254600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0002720 | RBH | 0.0 | 5.283746 | 1.501188 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0002730 | RBH | 0.000000 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0002740 | RBH | 0.000000 | 0.0 | 2.932571 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0002620 | RBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0002810 | RBH | 0.000000 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0076100 | RBH | 0.945229 | 0.176596 | 0.8691565 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0002700 | RBH | 0.000000 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0078600 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0002740 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0002770 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0002800 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0049130 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0002800 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G002760 | RBH | 0.000000 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0002780 | RBH | 0.000000 | 0.0 | 0.0 |
