Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_09g0002670 | OGI:09012630 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr09:5294163-5294567 | ||||||||
| Gene Symbol | SWEET7E, OsSWEET7e, SWEET7e, SWEET7B, OsSWEET7b, SWEET7b | ||||||||||
| DNA seq | atggtgtccccggacttgatccgcaacgtggtgggcatcgtcggcaatgtcatctcctttggcctcttcctctcgccggtgcccaccttctggcggatcatcaagaataaggacgtgcagaacttcaaggcggaccagtacctagccacgctgctcaattgcatgctctgggttttctatggtctccccatcatccaccccaacagcattctcatcgtcaccatcaacggtattggcctcgtcatcgaggccgtctacctcaccatcttctttctcttctccgacaagaagaacaagaagaagatgggagtggtgttcactacggagactctcttcatggcggcggtggcactcggcgtgcttttagacgcgcacacctatcagagacgatcaagcgctccttga
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| CDS seq | atggtgtccccggacttgatccgcaacgtggtgggcatcgtcggcaatgtcatctcctttggcctcttcctctcgccggtgcccaccttctggcggatcatcaagaataaggacgtgcagaacttcaaggcggaccagtacctagccacgctgctcaattgcatgctctgggttttctatggtctccccatcatccaccccaacagcattctcatcgtcaccatcaacggtattggcctcgtcatcgaggccgtctacctcaccatcttctttctcttctccgacaagaagaacaagaagaagatgggagtggtgttcactacggagactctcttcatggcggcggtggcactcggcgtgcttttagacgcgcacacctatcagagacgatcaagcgctccttga
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| Protein seq | MVSPDLIRNVVGIVGNVISFGLFLSPVPTFWRIIKNKDVQNFKADQYLATLLNCMLWVFYGLPIIHPNSILIVTINGIGLVIEAVYLTIFFLFSDKKNKKKMGVVFTTETLFMAAVALGVLLDAHTYQRRSSAP |
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| Function | Putative bidirectional sugar transporter SWEET7d [UniProtKB/Swiss-Prot:B9G2E6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_09g0002670 | OsLiXu_09g0002670.01 | Chr09 | 5294163 | 5294567 | + | NAM | ||
| CDS seq | atggtgtccccggacttgatccgcaacgtggtgggcatcgtcggcaatgtcatctcctttggcctcttcctctcgccggtgcccaccttctggcggatcatcaagaataaggacgtgcagaacttcaaggcggaccagtacctagccacgctgctcaattgcatgctctgggttttctatggtctccccatcatccaccccaacagcattctcatcgtcaccatcaacggtattggcctcgtcatcgaggccgtctacctcaccatcttctttctcttctccgacaagaagaacaagaagaagatgggagtggtgttcactacggagactctcttcatggcggcggtggcactcggcgtgcttttagacgcgcacacctatcagagacgatcaagcgctccttga
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| Protein seq | MVSPDLIRNVVGIVGNVISFGLFLSPVPTFWRIIKNKDVQNFKADQYLATLLNCMLWVFYGLPIIHPNSILIVTINGIGLVIEAVYLTIFFLFSDKKNKKKMGVVFTTETLFMAAVALGVLLDAHTYQRRSSAP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.833390 | 0.0 | 0.374554 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0256650 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g08440 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0256650 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0002650 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0002660 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0002680 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0002550 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0002800 | RBH | 2.310897 | 0.0 | 1.664100 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0076000 | RBH | 1.688101 | 0.659454 | 1.527817 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0002690 | RBH | 0.118660 | 0.0 | 0.294232 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0077700 | RBH | 0 | 0 | 0.0079505 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0002730 | RBH | 0.102277 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0002760 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0002790 | RBH | 14.021521 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0049270 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0002790 | RBH | 0.417011 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G002750 | RBH | 0.039737 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0002720 | RBH | 0.0 | 0.0 | 0.0 |
