Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_08g0021660 | OGI:08072660 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr08:27556141-27556859 | ||||||||
| Gene Symbol | BGLU28, Os8bglu28, OsBGlu28 | ||||||||||
| DNA seq | tcactgacttggtaaaatcctgctccatgcaatggagaaccggaaggaatccatgttcatcgcggtgatgaggttcaaatcctcctgcacagtttcagaatttaccatggactcaactaaacggacacaaaattacaaattcctcataagcagaaaaggaatcaccttgtaccgatgatagaagtcattcgctatatctgcattgctaccatctgcgattttacctgcaagagaaaaaaaagcatgctctttttacaatcaaatccaataattcctggttgattaattagcatctcgaccgcaaatgctgctgctaagttcaagataacgcgcttagctgcaaacaatttagctgcaaataatctctgaaacatatcgaggcaaagcaccaaagatgacctggaatgcggctgaaggtgtcccagatgttctgacctcgcttgtcgacagcaccctcgtactgcacatcatactatgtcagagaaaatcgttcaagaagaacaatggcgagtgagctgagcaagaacctgaaaagattcgatgctgcggtgtaggaatcaaagatggagcggtggtgaattaacctgatacgcggaggtgccggtgccgaagaggaacccctcggggaagctgtgcctgttgagtgcgccatggacgcggttggagctgcaagccagagcgatgaacagtagagcagagagaaggagccgacgatccat
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| CDS seq | atggatcgtcggctccttctctctgctctactgttcatcgctctggcttgcagctccaaccgcgtccatggcgcactcaacaggcacagcttccccgaggggttcctcttcggcaccggcacctccgcgtatcagtatgatgtgcagtacgagggtgctgtcgacaagcgaggtcagaacatctgggacaccttcagccgcattccaggtaaaatcgcagatggtagcaatgcagatatagcgaatgacttctatcatcggtacaaggaggatttgaacctcatcaccgcgatgaacatggattccttccggttctccattgcatggagcaggattttaccaagtcagtga |
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| Protein seq | MDRRLLLSALLFIALACSSNRVHGALNRHSFPEGFLFGTGTSAYQYDVQYEGAVDKRGQNIWDTFSRIPGKIADGSNADIANDFYHRYKEDLNLITAMNMDSFRFSIAWSRILPSQ |
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| Function | Beta-glucosidase 28 [UniProtKB/Swiss-Prot:Q7EXZ4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_08g0021660 | OsLiXu_08g0021660.01 | Chr08 | 27556141 | 27556859 | - | NAM | ||
| CDS seq | atggatcgtcggctccttctctctgctctactgttcatcgctctggcttgcagctccaaccgcgtccatggcgcactcaacaggcacagcttccccgaggggttcctcttcggcaccggcacctccgcgtatcagtatgatgtgcagtacgagggtgctgtcgacaagcgaggtcagaacatctgggacaccttcagccgcattccaggtaaaatcgcagatggtagcaatgcagatatagcgaatgacttctatcatcggtacaaggaggatttgaacctcatcaccgcgatgaacatggattccttccggttctccattgcatggagcaggattttaccaagtcagtga
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| Protein seq | MDRRLLLSALLFIALACSSNRVHGALNRHSFPEGFLFGTGTSAYQYDVQYEGAVDKRGQNIWDTFSRIPGKIADGSNADIANDFYHRYKEDLNLITAMNMDSFRFSIAWSRILPSQ |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0509400 | RBH | 1.442063 | 0.827782 | 0.330959 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g39870 | RBH | 0.316445 | 0.578037 | 0.083984 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0509400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0021650 | RBH | 0.0 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0021540 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0021420 | RBH | 0.000000 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0021610 | RBH | 0.000000 | 0.764632 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0021470 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0403400 | SBH | 15.328371 | 3.085782 | 0.0239755 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0021350 | RBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0423200 | RBH | 14.0610015 | 0.142204 | 0.076061 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0020690 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0020990 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0020810 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0021020 | RBH | 0.127303 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G021160 | RBH | 0.0 | 1.585431 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0021340 | RBH | 0.394148 | 2.902063 | 0.855027 |
