Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_08g0021570 | OGI:08072380 | 14/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr08:27445294-27446980 | ||||||||
| Gene Symbol | CYP76M2, CYP76M2, CYP76C6 | ||||||||||
| DNA seq | gtacacgcacatccataatggagcgcgacgcgtggctgctatgtgcagcgctcgccgcggcgacggtcgtctactacctcgcctgcacgacgtcgcgccgcgcgcagcggcgtcgtctgcctcctggcccgacgccgctgccggtgatcggcaatgtgctcagcctgcgcggcaacatgcaccacgcgctggcgcgcctcgcgcgcgagcggtatggccccgtgatggcgctgaagctgggcctcgtcaccgccgtggtcgtctcctcgcccgacgcggcgagggaggcgttcaccaagcacgaccggcgcctcgcggcgcgcgccgtcccggacaccagccgcgtgcgcgggttcgccgaccggtccatgatatggctgccgagctccgacacgcgctggaagacgctgcgcggggtggtggccacgcacgtcttctcgccacggagcatcgccgcggcgcgcggcgtccgcgagcgcaaggtgcgcgacatcgtcggctacttcgccgcgcacgtcggggaggtggtcgacgtcggcgaggccgtgtacagcggggtggtcaacctcgtgtcgaacgccttcttctccggtgacgtggtcgacgtcggcgaggagtcggcgcacgggctacgggaagccgtggaggacatcatcttggcgatcgcgaagcccaacgtctccgacctttttcccttcctccgcccgctcgacctgcagggatggcgtcgctgggcggagaaacgctacgacacggtgttcgacatcttggacaacataaccaacagccgtttggccgacgcctcggcaggaaaccacgccggcgacttcctggactccctcctcggcctcatgtcctacggcaagatcgctcgcgacgacgtgacaaccataatgttcgacgtgttcggcgccgggacagacacgatcgccatcacggtgcagtgggcgatggcggagctgctccgcaacccgagcataatggccaaggcgcgcacagagatggaggacgtcctcgccggcaagaaaaccatcgaggagaacgacacggagaagttgccgtacctccgggccgtgataaaggaggcaatgcggcttcacccggtggcaccgatactactgccgcaccaggcggcggaggacggcgtggagatcggcggctacgccgtgccgaaggggtcgacggtgatcttcaacgtgtgggcgatcatgcgtgacccgacggcgtgggagaggccggacgagttcatgccagagagattcctgcaaagagcagaggtagatttccgaggaaaagacttcgagttcatgccgttcggggccggaaggaggctgtgcccggggttgccgatggcagagcgcgtcgtgccattcatactggcgtcgctgctgcacgcgttcgagtggaggctccccgacggcatgtcggctgaggagttggatgtcagtgagaagttcaccacagccaatgttcttactgtcccactgaaggccgtccccatacttgcctctagtgctagtgaactacaagcaagctagcaggatagcctacctcatggcgcatttgcggggctacatttaaagtttaaatatcgaataatactatcaaataaagcacagcttcggtgcatatttatcttttgtttctttgtaatcctacttgtttttatattaatgaaatcagtgtt
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| CDS seq | atggagcgcgacgcgtggctgctatgtgcagcgctcgccgcggcgacggtcgtctactacctcgcctgcacgacgtcgcgccgcgcgcagcggcgtcgtctgcctcctggcccgacgccgctgccggtgatcggcaatgtgctcagcctgcgcggcaacatgcaccacgcgctggcgcgcctcgcgcgcgagcggtatggccccgtgatggcgctgaagctgggcctcgtcaccgccgtggtcgtctcctcgcccgacgcggcgagggaggcgttcaccaagcacgaccggcgcctcgcggcgcgcgccgtcccggacaccagccgcgtgcgcgggttcgccgaccggtccatgatatggctgccgagctccgacacgcgctggaagacgctgcgcggggtggtggccacgcacgtcttctcgccacggagcatcgccgcggcgcgcggcgtccgcgagcgcaaggtgcgcgacatcgtcggctacttcgccgcgcacgtcggggaggtggtcgacgtcggcgaggccgtgtacagcggggtggtcaacctcgtgtcgaacgccttcttctccggtgacgtggtcgacgtcggcgaggagtcggcgcacgggctacgggaagccgtggaggacatcatcttggcgatcgcgaagcccaacgtctccgacctttttcccttcctccgcccgctcgacctgcagggatggcgtcgctgggcggagaaacgctacgacacggtgttcgacatcttggacaacataaccaacagccgtttggccgacgcctcggcaggaaaccacgccggcgacttcctggactccctcctcggcctcatgtcctacggcaagatcgctcgcgacgacgtgacaaccataatgttcgacgtgttcggcgccgggacagacacgatcgccatcacggtgcagtgggcgatggcggagctgctccgcaacccgagcataatggccaaggcgcgcacagagatggaggacgtcctcgccggcaagaaaaccatcgaggagaacgacacggagaagttgccgtacctccgggccgtgataaaggaggcaatgcggcttcacccggtggcaccgatactactgccgcaccaggcggcggaggacggcgtggagatcggcggctacgccgtgccgaaggggtcgacggtgatcttcaacgtgtgggcgatcatgcgtgacccgacggcgtgggagaggccggacgagttcatgccagagagattcctgcaaagagcagaggtagatttccgaggaaaagacttcgagttcatgccgttcggggccggaaggaggctgtgcccggggttgccgatggcagagcgcgtcgtgccattcatactggcgtcgctgctgcacgcgttcgagtggaggctccccgacggcatgtcggctgaggagttggatgtcagtgagaagttcaccacagccaatgttcttactgtcccactgaaggccgtccccatacttgcctctagtgctagtgaactacaagcaagctag
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| Protein seq | MERDAWLLCAALAAATVVYYLACTTSRRAQRRRLPPGPTPLPVIGNVLSLRGNMHHALARLARERYGPVMALKLGLVTAVVVSSPDAAREAFTKHDRRLAARAVPDTSRVRGFADRSMIWLPSSDTRWKTLRGVVATHVFSPRSIAAARGVRERKVRDIVGYFAAHVGEVVDVGEAVYSGVVNLVSNAFFSGDVVDVGEESAHGLREAVEDIILAIAKPNVSDLFPFLRPLDLQGWRRWAEKRYDTVFDILDNITNSRLADASAGNHAGDFLDSLLGLMSYGKIARDDVTTIMFDVFGAGTDTIAITVQWAMAELLRNPSIMAKARTEMEDVLAGKKTIEENDTEKLPYLRAVIKEAMRLHPVAPILLPHQAAEDGVEIGGYAVPKGSTVIFNVWAIMRDPTAWERPDEFMPERFLQRAEVDFRGKDFEFMPFGAGRRLCPGLPMAERVVPFILASLLHAFEWRLPDGMSAEELDVSEKFTTANVLTVPLKAVPILASSASELQAS |
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| Function | Cytochrome P450 76M5 [UniProtKB/Swiss-Prot:Q6YTF5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_08g0021570 | OsLiXu_08g0021570.01 | Chr08 | 27445294 | 27446980 | + | NAM | ||
| CDS seq | atggagcgcgacgcgtggctgctatgtgcagcgctcgccgcggcgacggtcgtctactacctcgcctgcacgacgtcgcgccgcgcgcagcggcgtcgtctgcctcctggcccgacgccgctgccggtgatcggcaatgtgctcagcctgcgcggcaacatgcaccacgcgctggcgcgcctcgcgcgcgagcggtatggccccgtgatggcgctgaagctgggcctcgtcaccgccgtggtcgtctcctcgcccgacgcggcgagggaggcgttcaccaagcacgaccggcgcctcgcggcgcgcgccgtcccggacaccagccgcgtgcgcgggttcgccgaccggtccatgatatggctgccgagctccgacacgcgctggaagacgctgcgcggggtggtggccacgcacgtcttctcgccacggagcatcgccgcggcgcgcggcgtccgcgagcgcaaggtgcgcgacatcgtcggctacttcgccgcgcacgtcggggaggtggtcgacgtcggcgaggccgtgtacagcggggtggtcaacctcgtgtcgaacgccttcttctccggtgacgtggtcgacgtcggcgaggagtcggcgcacgggctacgggaagccgtggaggacatcatcttggcgatcgcgaagcccaacgtctccgacctttttcccttcctccgcccgctcgacctgcagggatggcgtcgctgggcggagaaacgctacgacacggtgttcgacatcttggacaacataaccaacagccgtttggccgacgcctcggcaggaaaccacgccggcgacttcctggactccctcctcggcctcatgtcctacggcaagatcgctcgcgacgacgtgacaaccataatgttcgacgtgttcggcgccgggacagacacgatcgccatcacggtgcagtgggcgatggcggagctgctccgcaacccgagcataatggccaaggcgcgcacagagatggaggacgtcctcgccggcaagaaaaccatcgaggagaacgacacggagaagttgccgtacctccgggccgtgataaaggaggcaatgcggcttcacccggtggcaccgatactactgccgcaccaggcggcggaggacggcgtggagatcggcggctacgccgtgccgaaggggtcgacggtgatcttcaacgtgtgggcgatcatgcgtgacccgacggcgtgggagaggccggacgagttcatgccagagagattcctgcaaagagcagaggtagatttccgaggaaaagacttcgagttcatgccgttcggggccggaaggaggctgtgcccggggttgccgatggcagagcgcgtcgtgccattcatactggcgtcgctgctgcacgcgttcgagtggaggctccccgacggcatgtcggctgaggagttggatgtcagtgagaagttcaccacagccaatgttcttactgtcccactgaaggccgtccccatacttgcctctagtgctagtgaactacaagcaagctag
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| Protein seq | MERDAWLLCAALAAATVVYYLACTTSRRAQRRRLPPGPTPLPVIGNVLSLRGNMHHALARLARERYGPVMALKLGLVTAVVVSSPDAAREAFTKHDRRLAARAVPDTSRVRGFADRSMIWLPSSDTRWKTLRGVVATHVFSPRSIAAARGVRERKVRDIVGYFAAHVGEVVDVGEAVYSGVVNLVSNAFFSGDVVDVGEESAHGLREAVEDIILAIAKPNVSDLFPFLRPLDLQGWRRWAEKRYDTVFDILDNITNSRLADASAGNHAGDFLDSLLGLMSYGKIARDDVTTIMFDVFGAGTDTIAITVQWAMAELLRNPSIMAKARTEMEDVLAGKKTIEENDTEKLPYLRAVIKEAMRLHPVAPILLPHQAAEDGVEIGGYAVPKGSTVIFNVWAIMRDPTAWERPDEFMPERFLQRAEVDFRGKDFEFMPFGAGRRLCPGLPMAERVVPFILASLLHAFEWRLPDGMSAEELDVSEKFTTANVLTVPLKAVPILASSASELQAS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.054631 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0508000 | RBH | 0.936873 | 0.736505 | 1.056216 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g39730 | RBH | 0.619654 | 0.484487 | 0.265922 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0508000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0021560 | RBH | 0.0 | 5.170091 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0021450 | RBH | 0.076150 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0021330 | RBH | 0.623455 | 0.0 | 0.370441 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0021520 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0021380 | RBH | 0.0 | 2.046886 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0401100 | RBH | 1.5049005 | 1.1148775 | 0.6099175 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0021250 | RBH | 0.0 | 0.515753 | 0.055540 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0421400 | RBH | 0.233154 | 0.6587985 | 0.03405 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0020580 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0020890 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0020720 | RBH | 0.0 | 3.742885 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0046780 | RBH | 0.060594 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0020930 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G021080 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0021260 | SBH | 0.0 | 0.000000 | 0.0 |
