Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_07g0025100 | OGI:07074170 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr07:26588548-26590960 | ||||||||
| Gene Symbol | GELP93, OsGELP93 | ||||||||||
| DNA seq | tatatatatatatatatatataTAgatagattagattagtcgaacaaacaggcgacaaatcgaattttcgaaaaaaaaaattgtccgtgcaaattaacaaacgagcaaatcccaaactggcttaagctagctagtaggctagtagccgtggcatctggacatgatgggcgggtcggcgaacgggccgtcgagcacgccgcgcgccatgatccggtacaccgcctccgtcatgtgcaggccgtcccacgagatgcgccgcgacgggtccgcgcactgcgtcgcgccggggtcggagcagtgcacggtgaagttgccgttgtacggcccgccgccggcgcagcacgcggtcagggcgtcgtcgaacccgctcgccgtggggttcgacacgagctccatcacctcgccgtagtagtcggcgtaggcgatggtgacgcccgggtgcgcggcgcggagctcggcgaggcggcggcggaggagcgcgttgtggagggcggcgaggccgtcgttgagcccccggaggcagcccgtggcggggtcgcggtcgccggcgccgccgtcccggaagaggaagaggaggcgcgggacgcagccgagcgggaagaggcccgggacgtagacggtggtggcgccgagcccgacgagctcctcgacggcgccggcgatgtagcggacgacgcgcggcaccagcgggcgcacccactccagcgtcttgttctggaacagcgggtggaggtagtcgttgccgccgaactcgcccaccatgaacaccgacctcgccatcgcctccttccgctctgcaaaccattttaaccattttggttcatcaccaccgtcattgctcaaaatttcatgattcttttaaaaaaAttaaaaaattcgaaaattttgaatgaaaaaaatgaatttgaacaactttgttggtaggctaaaacaaattcgattttttggcctggagtttcagaaattacaacgcgttccaaagttggtgttcgctttttattaagataaagatgaagttatggcatgaaaaacaagaaaaaacattagtacataattaattatattttaattattacaaagctgaaaaaataaattatataatattttaaaacaatttctatataaaaagttttcgcacgaagtatatcgtttagtaattttaaaaaatgttatcagaaataacgagatctgactacagtttatgggctattctccgtacgttcgtgattaacagtgccgacagtaatgcagttcctcgcgtacaaacaaggtacactgacctacagtctcaacgaaatgctgctgattcaatgattcatcggcccaacattccaacaaaatcatcgatataattcgctcatcgtcgtgttacattaacagtgaacaaattgaatcgtacacgcagcatgcgtacgaattaaacagcaacatcaacatcaattccagttaattattaatcatatcgctgagattaataatcttatctagtttcagattataagacgactgactaagacaaactgtttcaaatttaaccaaatttatagaaaacatagtcatattttttacctaagataaatttattataaaaatatatttaattattaatttaataaaactaatttggtaacataaatattactatatttatatataaatttaattaaatttaaagcattttgaaagtcaaagcatcttacgaactgaaatagagggattacttaattagtataaaattggcgatgattaaccttgttctgtggaggcgagcatggcaagaaccttcttgaaccagccgacctggacggcgagggagtagggcgtgatgccggcgacgctgaggtgcttcttcttgaacagcagctggttcagcgccgtcccgctcgccaccgcgaagttggcgccgtaccggaagtcctccctgctcttcccggccaagtacggcgtccagtacgggaaccccagcctctccactgcatccatccatcacatcgtcgtcatcgtcatcgtctccggcggcggcggcggcgctaggtagagatagctaagctaagctcatgggtggtttgcgttaccgatgaagtcgacgatgaggcggccgtcggaccagcggccggtggggcggcggaagaaggtctcgccgtagggggagcgggcgacggggcccggcgaggtggagtagtggatgaagttgccggtgtcgatcagcgagttgccgaaggtgaacaggtggctgtagcacccgccgctcggcgccgtcgccgtcgtcgtcgtgacgttcgccgccgacgccgtggctgcgcacaaggctaaggcggcgacaagtatagccgccactgcgggagcagacaaccgcgccggcctcgtcgccatggttggagcttggatatgcaaaatggcttctccagtggcg
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| CDS seq | atggcgacgaggccggcgcggttgtctgctcccgcagtggcggctatacttgtcgccgccttagccttgtgcgcagccacggcgtcggcggcgaacgtcacgacgacgacggcgacggcgccgagcggcgggtgctacagccacctgttcaccttcggcaactcgctgatcgacaccggcaacttcatccactactccacctcgccgggccccgtcgcccgctccccctacggcgagaccttcttccgccgccccaccggccgctggtccgacggccgcctcatcgtcgacttcatcgtggagaggctggggttcccgtactggacgccgtacttggccgggaagagcagggaggacttccggtacggcgccaacttcgcggtggcgagcgggacggcgctgaaccagctgctgttcaagaagaagcacctcagcgtcgccggcatcacgccctactccctcgccgtccaggtcggctggttcaagaagaatcatgaaattttgagcaatgacggtggtgatgaaccaaaatggttaaaatggtttgcagagcggaaggaggcgatggcgaggtcggtgttcatggtgggcgagttcggcggcaacgactacctccacccgctgttccagaacaagacgctggagtgggtgcgcccgctggtgccgcgcgtcgtccgctacatcgccggcgccgtcgaggagctcgtcgggctcggcgccaccaccgtctacgtcccgggcctcttcccgctcggctgcgtcccgcgcctcctcttcctcttccgggacggcggcgccggcgaccgcgaccccgccacgggctgcctccgggggctcaacgacggcctcgccgccctccacaacgcgctcctccgccgccgcctcgccgagctccgcgccgcgcacccgggcgtcaccatcgcctacgccgactactacggcgaggtgatggagctcgtgtcgaaccccacggcgagcgggttcgacgacgccctgaccgcgtgctgcgccggcggcgggccgtacaacggcaacttcaccgtgcactgctccgaccccggcgcgacgcagtgcgcggacccgtcgcggcgcatctcgtgggacggcctgcacatgacggaggcggtgtaccggatcatggcgcgcggcgtgctcgacggcccgttcgccgacccgcccatcatgtccagatgccacggctactag
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| Protein seq | MATRPARLSAPAVAAILVAALALCAATASAANVTTTTATAPSGGCYSHLFTFGNSLIDTGNFIHYSTSPGPVARSPYGETFFRRPTGRWSDGRLIVDFIVERLGFPYWTPYLAGKSREDFRYGANFAVASGTALNQLLFKKKHLSVAGITPYSLAVQVGWFKKNHEILSNDGGDEPKWLKWFAERKEAMARSVFMVGEFGGNDYLHPLFQNKTLEWVRPLVPRVVRYIAGAVEELVGLGATTVYVPGLFPLGCVPRLLFLFRDGGAGDRDPATGCLRGLNDGLAALHNALLRRRLAELRAAHPGVTIAYADYYGEVMELVSNPTASGFDDALTACCAGGGPYNGNFTVHCSDPGATQCADPSRRISWDGLHMTEAVYRIMARGVLDGPFADPPIMSRCHGY |
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| Function | GDSL esterase/lipase At1g28600 [UniProtKB/Swiss-Prot:Q94F40] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_07g0025100 | OsLiXu_07g0025100.01 | Chr07 | 26588686 | 26590944 | - | NAM | ||
| CDS seq | atggcgacgaggccggcgcggttgtctgctcccgcagtggcggctatacttgtcgccgccttagccttgtgcgcagccacggcgtcggcggcgaacgtcacgacgacgacggcgacggcgccgagcggcgggtgctacagccacctgttcaccttcggcaactcgctgatcgacaccggcaacttcatccactactccacctcgccgggccccgtcgcccgctccccctacggcgagaccttcttccgccgccccaccggccgctggtccgacggccgcctcatcgtcgacttcatcgtggagaggctggggttcccgtactggacgccgtacttggccgggaagagcagggaggacttccggtacggcgccaacttcgcggtggcgagcgggacggcgctgaaccagctgctgttcaagaagaagcacctcagcgtcgccggcatcacgccctactccctcgccgtccaggtcggctggttcaagaagaatcatgaaattttgagcaatgacggtggtgatgaaccaaaatggttaaaatggtttgcagagcggaaggaggcgatggcgaggtcggtgttcatggtgggcgagttcggcggcaacgactacctccacccgctgttccagaacaagacgctggagtgggtgcgcccgctggtgccgcgcgtcgtccgctacatcgccggcgccgtcgaggagctcgtcgggctcggcgccaccaccgtctacgtcccgggcctcttcccgctcggctgcgtcccgcgcctcctcttcctcttccgggacggcggcgccggcgaccgcgaccccgccacgggctgcctccgggggctcaacgacggcctcgccgccctccacaacgcgctcctccgccgccgcctcgccgagctccgcgccgcgcacccgggcgtcaccatcgcctacgccgactactacggcgaggtgatggagctcgtgtcgaaccccacggcgagcgggttcgacgacgccctgaccgcgtgctgcgccggcggcgggccgtacaacggcaacttcaccgtgcactgctccgaccccggcgcgacgcagtgcgcggacccgtcgcggcgcatctcgtgggacggcctgcacatgacggaggcggtgtaccggatcatggcgcgcggcgtgctcgacggcccgttcgccgacccgcccatcatgtccagatgccacggctactag
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| Protein seq | MATRPARLSAPAVAAILVAALALCAATASAANVTTTTATAPSGGCYSHLFTFGNSLIDTGNFIHYSTSPGPVARSPYGETFFRRPTGRWSDGRLIVDFIVERLGFPYWTPYLAGKSREDFRYGANFAVASGTALNQLLFKKKHLSVAGITPYSLAVQVGWFKKNHEILSNDGGDEPKWLKWFAERKEAMARSVFMVGEFGGNDYLHPLFQNKTLEWVRPLVPRVVRYIAGAVEELVGLGATTVYVPGLFPLGCVPRLLFLFRDGGAGDRDPATGCLRGLNDGLAALHNALLRRRLAELRAAHPGVTIAYADYYGEVMELVSNPTASGFDDALTACCAGGGPYNGNFTVHCSDPGATQCADPSRRISWDGLHMTEAVYRIMARGVLDGPFADPPIMSRCHGY
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_07g0025100 | OsLiXu_07g0025100.02 | Chr07 | 26588548 | 26590960 | - | IsoSeq | ||
| CDS seq | ccactggagaagccattttgcatatccaagctccaaccatggcgacgaggccggcgcggttgtctgctcccgcagtggcggctatacttgtcgccg |
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| Protein seq | PLEKPFCISKLQPWRRGRRGCLLPQWRLYLSP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 3.710665 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0642200 | RBH | 0.448800 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g44780 | RBH | 0.330205 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0642200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0025090 | RBH | 0.0 | 72.133171 | 0.661092 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0025140 | RBH | 0.0 | 4.915974 | 0.219574 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0025000 | RBH | 0.0 | 53.062256 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0024910 | RBH | 0.0 | 0.694157 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0025060 | RBH | 0.0 | 40.512970 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0439800 | RBH | 1.764471 | 0.9725435 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0025580 | RBH | 0.0 | 3.626007 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0450900 | RBH | 3.382654 | 0.451216 | 0.1047595 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0024850 | RBH | 0.0 | 0.360713 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0024960 | RBH | 0.0 | 6.101117 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0024910 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0018570 | RBH | 0.0 | 0.485368 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0024800 | RBH | 0.0 | 25.102356 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G024800 | RBH | 0.0 | 1.656168 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0024840 | RBH | 0.0 | 24.337822 | 0.0 |
