Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_07g0011310 | OGI:07034840 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr07:11952691-11958520 | ||||||||
| Gene Symbol | OsPILS5, PILS5 | ||||||||||
| DNA seq | ACAGAAGATCCCGTTCCCGTGCTCTGTTGCCAATTCTCCCCCACCACCATGCTCCTCGCCGCGCGCGGCCGCCGCCACCCccgccgccgcgcgcctccttccgatcccgctttcctccggcccctccttcgcctcctccaccaccaccacgacctccaatggcgcctgttcgtcctccgccgcggaccccgacgccgtggccgccgaggtggccaccctcctctcccgctgctccggcgactggaggctcgccgtctcctcctccgacctcccctcccgcctctcccccgctgccatctcctccctcgtccgacgacgcccatccccctcctccccgcgcctccaccctaagctcctcctcgacttcttctactggtccagcccccagctcgcgccgtcggcccccgcccccgatgccttcgcccacctggccatgtccctgtgcgccggctcactcttcaacctggccaacggcctcctcatcaagatgatccgcgcctacccgtcacctcccgtcgtcctcgcctccatccatcgcgcgctatcggattctggccaccgttcgccggcggtgctcgacgtcctcgtggatacctacaagaagtccgggagggtgcaggacgccgcggaggtcgtcctgatgatgaGagatctaggcttggctcccagcattcggtgctgcaacgcgctgttgaaggatctgctgcgcgcggacgccatggctctgctttggaaggtgcgagagttcatggttggcgctgggatttcccCggatgtgtatacgtactcgactctgatcgaagcctactgcaaggtccgggaatttgatactgccaagaaggtgcttgtggaaatgcgtgagagggggtgcggcctgaacaccgtaacctataatgtgctgattgctgggttatgcaggtctggggctgtcgaagaggcgtttgggttcaagaaggacatggaagattatggactagttcctgacggGtttacctatggtgcactcattaacggactgtgcaagagccgtcggtcaaatgaggcgaaggcattgttggacgagatgtcttgtgctgagctaaagcctaatgtcgtagtttatgccaatctgattgatgggtttatgagggagggcaatgcagatgaggcgtttaagatgataaaggagatggttgctgctggtgtgcagccgaacaaaattacctatgacaatcttgttcggggactatgtaagatggggcagatggacagggcttctctacttttgaagcaaatggtcagagatagccataggcctgataccatcacgtacaatctcattattgaaggacatttccgtcatcatagcaaaaaggatgcttttcggcttcttagtgaaatggagaatgctggtatttcccctaatgtatatacttatagcataatgattcatggGctatgccaaagtggtgaaccagaaaaggcaagtgatctccttgaggaaatgactacaaaaggattgaagcctaatgcatttgtttatgcgcctcttatctcagggtactgtagagaaggtaatgtttcattggcatgtgaagttttTgataagatgacaaaggtgaatgtactccctgatttgtactgctacaattctcttatatttggactatctaaggtgggaagggtggaggaatctacaaggtactttgctcagatgcaggagagaggattgctgccaaatgaattcacatacagtggtctcattcatgggtatctaaagaatggtgatctagaaagtgctgaacagttagtgcagcggatgcttgacactggactaaaAccaaatgatgttatcttcattgatctcctagaaagctactttaagtcagatgatattgaaaaggtgtcctctactttcaagtccatgttagaccagggggttatgcttgacaaccgtatctatggaatcttgattcataatctgtccagttctggaaatatggaagcagcatttagggttctttcagagattgagaagaatggatctgttccggatgtgcatgtgtacagctcgttgatatcaggtctttgcaagacagctgacaggGaaaaagcttttggtattcttgatgaaatgtctaagaagggagtagatcctaatattgtatgctataatgccctaattgatgggctgtgcaagtctggtgatatttcttatgcccgcaatgtcttcaatagcatattagctaagggattagtgccaaactgtgtgacatacacaagtttgattgatggaagctgcaaagttggtgacatcagcaatgcattctatctttataatgaaatgctagcaacaggtataacaccagatgcttttgtctatagtgtacttaccactggctgctctagtgctggtgacctTgagcaggcaatgtttctgatTgagGaaatgtttcttaggggacatgcaagtatttcttctttcaataatttagttgatggtttctgcaaacgtggaaagatgcaggaaactttgaagttgttgcatgtgataatgggcaggggcctagtacctaatgccctgactattgaaaacatcatcagtggacttagtgaggctggaaaactcagtgaagtgcacacaatttttgttgagttgcagcagaaaacttcagaaagcactgcccgccacttttcctcattgtttatggacatgataaatcaaggaaaaattcctcttgatgtggttgatgacatgattcgagatcattgtaaagaaggaaatctggacaaggctttaatgctgcgagatgttattgttgcgaaaAgtgcaccaatgggctgctcgtcttatcttgctatagtggacaatctatgccggaagggaaaattaagtgaagcgttgaatttgctgaaagaaatggacaagagaggtatttgtcccagtgagaatcaatgcttgatactattaactaatcttcatacatctggatatatccaagaacaCaatacggtacttgataatatgttgtgtcacaagtggttacagaaggacagcaaattctgtaattcagctggtgataatctggaatctgtcaatgcagaataaAcatagagcagaatccttcctataaaagaaagtctgattctattattcatgttgcgaatgcatgtcttagccttgtttttgtttattgatgaggaattaaacagattaatttttTcaagaaaatgctcctgtcctgttagttaattgttacAcagggaaccttcagccaActttggttgctctgcttggcatcttctggttcaggaggcatcatcatatattgaacaaggtgagctctcattagcacatagccatttactgcgaaaaattggtattaattgtctctggctgatcttgttgagatttctgacaggttgttttcactgtcttcgcaccatctctcatgtttgctagcctggcgaagacggtcacgttgtctgacaggttgttttcactgtcttcacaatgcaagtgcagttactacaaaatctgcccaaattccattaccacattctaataactaccaaaatcaacacaatatgtatagctcagccagactttctggattttttgaactgtaagatctttctgaaatttataaggattcttgcagaagtgagagactctttctgaaatagtagacaagctttacatatctagctaGttttctcattcagaacacttttcgaatatctgggcagaccatatatacaatatccaaattttgtttgctgggtaactccactgcactaacaaaagaattctatcatgtaggtggtttatgccaattaacatagggatcacattcatggctggtggcactctaggctggatagcatgtaaaatcttgaaaccaccaacatttcagaggaatgatcattgccttctgctcaactggtaactttcctaggtggattgcatgtttttaccctcatatttttgctgaataatcctaatgttaggagtgtcatcaactgacaaaaaaatgcaggaaatcttggcaacttgctcctgattgttgtcccagcagtccgtgacgaagatggcaacccgtttcggaaaagacagcagccgctgccgctctcttgggctctcctattcatcattgtccatggctgtaagggaaaaaaaaaatctcattcactgaatgatcagctgaacaaaagaactgacacacactgtatctgcagcttggtgGcttgtacatatggacgcatacgtacagtcttatgaagaagaagagaggtcaaatgtatcaccagcctaacagcattcagggcctggacgacagcaatgaagaacatcatgctaagaaattcaaagcaaatggtgaagctgcttgcgccgatgaggaggcaactcttccggtgtcagctaaactggctgaacacaacgaggagaaccaaAtggtaggctgaacaaaacttagtactattaacttgtctgaaattcaggaagctccattgctgtctggagagagcgagattgctaagaaaggctcgtggacaacaacaaacttgaaggacaccatccatcatgttgtcgaggagctgatggcaccaccaactctatctgcggtgtgtttctgacaaaaccagcacagtatttcatctcatcaaccctgtcttggactaaAtttggttattcttgcttcagatacttggatttgtttttgggctagttccatggttgaaatctcttgtcatcggtgatggcgcccctctcagagtcatccaggactccatccaactgatggggtaagttagtatttacagtgttcttcttcatagagtatttctgtctatttttcagtgtttatttttcttgtcttgcagaaatggcacgattccttgcgtcaccctcatccttggtggcaatctgataaaaggtaggatgtcaattactcatgaagctgtgtgttttctgaacttgctctggatgtgcatgagttttctgaacctttatctgaatgtttttgcagggctaaggaagttggagttcaagcatacggtgatcatcgcgatcgtctgcatccgctacgtgatccttcctctagtggggattgcagtagttcatgGtgcatactgggtcggattcttgccacacgacccgctgtaccgctacgtgctgatgatgcagttagcgctgccacctgcaatgactattggtaatctttccctataacagatgccattttcttcgtactatctgtatttaaatatatgatgctgatgattttatttggtccttaatgtacaatgttgacctctattttctgttacaAtacaacatttttTgtagctaacaaaAttatAAtattgtaaaagtacttagcatgaagaaaaaaacatacctatatgattttttatgtcttacactaaatattttgagagctgttgtgatcaaagttttataaaagtataataActgaataaaatcaacagtatcatatatttaaatacaacgagagtacttattttgcgaggcaataccatttcgttctaaagcatttatctctgcttcCagtgagatctcatctgatcatacctcttgcatgtgtgtgatctaatccaggaaccatggctcaactgtttgatgttgcccaggaggaatgctcagtgatatttctgtggacttacctggtttcttccatttctctcaccacctggtccacgatattcatgtccatcccgtctttaggtcaaagtgcaatgatttcagcatttcagctaactcaaagggaggaggttgaagacaataatacgcctctagaaaagagtcgatccaactgaggcttgctcg
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| CDS seq | atgtccctgtgcgccggctcactcttcaacctggccaacggcctcctcatcaagatgatccgcgcctacccgtcacctcccgtcgtcctcgcctccatccatcgcgcgctatcggattctggccaccgttcgccggcggtgctcgacgtcctcgtggatacctacaagaagtccgggagggtgcaggacgccgcggaggtcgtcctgatgatgaGagatctaggcttggctcccagcattcggtgctgcaacgcgctgttgaaggatctgctgcgcgcggacgccatggctctgctttggaaggtgcgagagttcatggttggcgctgggatttcccCggatgtgtatacgtactcgactctgatcgaagcctactgcaaggtccgggaatttgatactgccaagaaggtgcttgtggaaatgcgtgagagggggtgcggcctgaacaccgtaacctataatgtgctgattgctgggttatgcaggtctggggctgtcgaagaggcgtttgggttcaagaaggacatggaagattatggactagttcctgacggGtttacctatggtgcactcattaacggactgtgcaagagccgtcggtcaaatgaggcgaaggcattgttggacgagatgtcttgtgctgagctaaagcctaatgtcgtagtttatgccaatctgattgatgggtttatgagggagggcaatgcagatgaggcgtttaagatgataaaggagatggttgctgctggtgtgcagccgaacaaaattacctatgacaatcttgttcggggactatgtaagatggggcagatggacagggcttctctacttttgaagcaaatggtcagagatagccataggcctgataccatcacgtacaatctcattattgaaggacatttccgtcatcatagcaaaaaggatgcttttcggcttcttagtgaaatggagaatgctggtatttcccctaatgtatatacttatagcataatgattcatggGctatgccaaagtggtgaaccagaaaaggcaagtgatctccttgaggaaatgactacaaaaggattgaagcctaatgcatttgtttatgcgcctcttatctcagggtactgtagagaaggtaatgtttcattggcatgtgaagttttTgataagatgacaaaggtgaatgtactccctgatttgtactgctacaattctcttatatttggactatctaaggtgggaagggtggaggaatctacaaggtactttgctcagatgcaggagagaggattgctgccaaatgaattcacatacagtggtctcattcatgggtatctaaagaatggtgatctagaaagtgctgaacagttagtgcagcggatgcttgacactggactaaaAccaaatgatgttatcttcattgatctcctagaaagctactttaagtcagatgatattgaaaaggtgtcctctactttcaagtccatgttagaccagggggttatgcttgacaaccgtatctatggaatcttgattcataatctgtccagttctggaaatatggaagcagcatttagggttctttcagagattgagaagaatggatctgttccggatgtgcatgtgtacagctcgttgatatcaggtctttgcaagacagctgacaggGaaaaagcttttggtattcttgatgaaatgtctaagaagggagtagatcctaatattgtatgctataatgccctaattgatgggctgtgcaagtctggtgatatttcttatgcccgcaatgtcttcaatagcatattagctaagggattagtgccaaactgtgtgacatacacaagtttgattgatggaagctgcaaagttggtgacatcagcaatgcattctatctttataatgaaatgctagcaacaggtataacaccagatgcttttgtctatagtgtacttaccactggctgctctagtgctggtgacctTgagcaggcaatgtttctgatTgagGaaatgtttcttaggggacatgcaagtatttcttctttcaataatttagttgatggtttctgcaaacgtggaaagatgcaggaaactttgaagttgttgcatgtgataatgggcaggggcctagtacctaatgccctgactattgaaaacatcatcagtggacttagtgaggctggaaaactcagtgaagtgcacacaatttttgttgagttgcagcagaaaacttcagaaagcactgcccgccacttttcctcattgtttatggacatgataaatcaaggaaaaattcctcttgatgtggttgatgacatgattcgagatcattgtaaagaaggaaatctggacaaggctttaatgctgcgagatgttattgttgcgaaaAgtgcaccaatgggctgctcgtcttatcttgctatagtggacaatctatgccggaagggaaaattaagtgaagcgttgaatttgctgaaagaaatggacaagagagggaaccttcagccaActttggttgctctgcttggcatcttctggttcaggaggcatcatcatatattgaacaaggttgttttcactgtcttcgcaccatctctcatgtttgctagcctggcgaagacggtcacgttgtctgacagaggaatgatcattgccttctgctcaactggaaatcttggcaacttgctcctgattgttgtcccagcagtccgtgacgaagatggcaacccgtttcggaaaagacagcagccgctgccgctctcttgggctctcctattcatcattcttggtgGcttgtacatatggacgcatacgtacagtcttatgaagaagaagagaggtcaaatgtatcaccagcctaacagcattcagggcctggacgacagcaatgaagaacatcatgctaagaaattcaaagcaaatggtgaagctgcttgcgccgatgaggaggcaactcttccggtgtcagctaaactggctgaacacaacgaggagaaccaaAtggaagctccattgctgtctggagagagcgagattgctaagaaaggctcgtggacaacaacaaacttgaaggacaccatccatcatgttgtcgaggagctgatggcaccaccaactctatctgcgatacttggatttgtttttgggctagttccatggttgaaatctcttgtcatcggtgatggcgcccctctcagagtcatccaggactccatccaactgatgggaaatggcacgattccttgcgtcaccctcatccttggtggcaatctgataaaagggctaaggaagttggagttcaagcatacggtgatcatcgcgatcgtctgcatccgctacgtgatccttcctctagtggggattgcagtagttcatgGtgcatactgggtcggattcttgccacacgacccgctgtaccgctacgtgctgatgatgcagttagcgctgccacctgcaatgactattggaaccatggctcaactgtttgatgttgcccaggaggaatgctcagtgatatttctgtggacttacctggtttcttccatttctctcaccacctggtccacgatattcatgtccatcccgtctttaggtcaaagtgcaatgatttcagcatttcagctaactcaaagggaggaggttgaagacaataatacgcctctagaaaagagtcgatccaactga
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| Protein seq | MSLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDLGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEVFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTRYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIFIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESTARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGIFWFRRHHHILNKVVFTVFAPSLMFASLAKTVTLSDRGMIIAFCSTGNLGNLLLIVVPAVRDEDGNPFRKRQQPLPLSWALLFIILGGLYIWTHTYSLMKKKRGQMYHQPNSIQGLDDSNEEHHAKKFKANGEAACADEEATLPVSAKLAEHNEENQMEAPLLSGESEIAKKGSWTTTNLKDTIHHVVEELMAPPTLSAILGFVFGLVPWLKSLVIGDGAPLRVIQDSIQLMGNGTIPCVTLILGGNLIKGLRKLEFKHTVIIAIVCIRYVILPLVGIAVVHGAYWVGFLPHDPLYRYVLMMQLALPPAMTIGTMAQLFDVAQEECSVIFLWTYLVSSISLTTWSTIFMSIPSLGQSAMISAFQLTQREEVEDNNTPLEKSRSN |
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| Function | Pentatricopeptide repeat-containing protein At5g61990, mitochondrial [UniProtKB/Swiss-Prot:Q9FIT7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_07g0011310 | OsLiXu_07g0011310.02 | Chr07 | 11952695 | 11958520 | + | NAM | ||
| CDS seq | atgtccctgtgcgccggctcactcttcaacctggccaacggcctcctcatcaagatgatccgcgcctacccgtcacctcccgtcgtcctcgcctccatccatcgcgcgctatcggattctggccaccgttcgccggcggtgctcgacgtcctcgtggatacctacaagaagtccgggagggtgcaggacgccgcggaggtcgtcctgatgatgaGagatctaggcttggctcccagcattcggtgctgcaacgcgctgttgaaggatctgctgcgcgcggacgccatggctctgctttggaaggtgcgagagttcatggttggcgctgggatttcccCggatgtgtatacgtactcgactctgatcgaagcctactgcaaggtccgggaatttgatactgccaagaaggtgcttgtggaaatgcgtgagagggggtgcggcctgaacaccgtaacctataatgtgctgattgctgggttatgcaggtctggggctgtcgaagaggcgtttgggttcaagaaggacatggaagattatggactagttcctgacggGtttacctatggtgcactcattaacggactgtgcaagagccgtcggtcaaatgaggcgaaggcattgttggacgagatgtcttgtgctgagctaaagcctaatgtcgtagtttatgccaatctgattgatgggtttatgagggagggcaatgcagatgaggcgtttaagatgataaaggagatggttgctgctggtgtgcagccgaacaaaattacctatgacaatcttgttcggggactatgtaagatggggcagatggacagggcttctctacttttgaagcaaatggtcagagatagccataggcctgataccatcacgtacaatctcattattgaaggacatttccgtcatcatagcaaaaaggatgcttttcggcttcttagtgaaatggagaatgctggtatttcccctaatgtatatacttatagcataatgattcatggGctatgccaaagtggtgaaccagaaaaggcaagtgatctccttgaggaaatgactacaaaaggattgaagcctaatgcatttgtttatgcgcctcttatctcagggtactgtagagaaggtaatgtttcattggcatgtgaagttttTgataagatgacaaaggtgaatgtactccctgatttgtactgctacaattctcttatatttggactatctaaggtgggaagggtggaggaatctacaaggtactttgctcagatgcaggagagaggattgctgccaaatgaattcacatacagtggtctcattcatgggtatctaaagaatggtgatctagaaagtgctgaacagttagtgcagcggatgcttgacactggactaaaAccaaatgatgttatcttcattgatctcctagaaagctactttaagtcagatgatattgaaaaggtgtcctctactttcaagtccatgttagaccagggggttatgcttgacaaccgtatctatggaatcttgattcataatctgtccagttctggaaatatggaagcagcatttagggttctttcagagattgagaagaatggatctgttccggatgtgcatgtgtacagctcgttgatatcaggtctttgcaagacagctgacaggGaaaaagcttttggtattcttgatgaaatgtctaagaagggagtagatcctaatattgtatgctataatgccctaattgatgggctgtgcaagtctggtgatatttcttatgcccgcaatgtcttcaatagcatattagctaagggattagtgccaaactgtgtgacatacacaagtttgattgatggaagctgcaaagttggtgacatcagcaatgcattctatctttataatgaaatgctagcaacaggtataacaccagatgcttttgtctatagtgtacttaccactggctgctctagtgctggtgacctTgagcaggcaatgtttctgatTgagGaaatgtttcttaggggacatgcaagtatttcttctttcaataatttagttgatggtttctgcaaacgtggaaagatgcaggaaactttgaagttgttgcatgtgataatgggcaggggcctagtacctaatgccctgactattgaaaacatcatcagtggacttagtgaggctggaaaactcagtgaagtgcacacaatttttgttgagttgcagcagaaaacttcagaaagcactgcccgccacttttcctcattgtttatggacatgataaatcaaggaaaaattcctcttgatgtggttgatgacatgattcgagatcattgtaaagaaggaaatctggacaaggctttaatgctgcgagatgttattgttgcgaaaAgtgcaccaatgggctgctcgtcttatcttgctatagtggacaatctatgccggaagggaaaattaagtgaagcgttgaatttgctgaaagaaatggacaagagagggaaccttcagccaActttggttgctctgcttggcatcttctggttcaggaggcatcatcatatattgaacaaggttgttttcactgtcttcgcaccatctctcatgtttgctagcctggcgaagacggtcacgttgtctgacagtcttatgaagaagaagagaggtcaaatgtatcaccagcctaacagcattcagggcctggacgacagcaatgaagaacatcatgctaagaaattcaaagcaaatggtgaagctgcttgcgccgatgaggaggcaactcttccggtgtcagctaaactggctgaacacaacgaggagaaccaaAtggaagctccattgctgtctggagagagcgagattgctaagaaaggctcgtggacaacaacaaacttgaaggacaccatccatcatgttgtcgaggagctgatggcaccaccaactctatctgcgatacttggatttgtttttgggctagttccatggttgaaatctcttgtcatcggtgatggcgcccctctcagagtcatccaggactccatccaactgatgggaaatggcacgattccttgcgtcaccctcatccttggtggcaatctgataaaagggctaaggaagttggagttcaagcatacggtgatcatcgcgatcgtctgcatccgctacgtgatccttcctctagtggggattgcagtagttcatgGtgcatactgggtcggattcttgccacacgacccgctgtaccgctacgtgctgatgatgcagttagcgctgccacctgcaatgactattggaaccatggctcaactgtttgatgttgcccaggaggaatgctcagtgatatttctgtggacttacctggtttcttccatttctctcaccacctggtccacgatattcatgtccatcccgtctttaggtcaaagtgcaatgatttcagcatttcagctaactcaaagggaggaggttgaagacaataatacgcctctagaaaagagtcgatccaactga
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| Protein seq | MSLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDLGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEVFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTRYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIFIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESTARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGIFWFRRHHHILNKVVFTVFAPSLMFASLAKTVTLSDSLMKKKRGQMYHQPNSIQGLDDSNEEHHAKKFKANGEAACADEEATLPVSAKLAEHNEENQMEAPLLSGESEIAKKGSWTTTNLKDTIHHVVEELMAPPTLSAILGFVFGLVPWLKSLVIGDGAPLRVIQDSIQLMGNGTIPCVTLILGGNLIKGLRKLEFKHTVIIAIVCIRYVILPLVGIAVVHGAYWVGFLPHDPLYRYVLMMQLALPPAMTIGTMAQLFDVAQEECSVIFLWTYLVSSISLTTWSTIFMSIPSLGQSAMISAFQLTQREEVEDNNTPLEKSRSN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_07g0011310 | OsLiXu_07g0011310.01 | Chr07 | 11952691 | 11958520 | + | NAM | ||
| CDS seq | atgtccctgtgcgccggctcactcttcaacctggccaacggcctcctcatcaagatgatccgcgcctacccgtcacctcccgtcgtcctcgcctccatccatcgcgcgctatcggattctggccaccgttcgccggcggtgctcgacgtcctcgtggatacctacaagaagtccgggagggtgcaggacgccgcggaggtcgtcctgatgatgaGagatctaggcttggctcccagcattcggtgctgcaacgcgctgttgaaggatctgctgcgcgcggacgccatggctctgctttggaaggtgcgagagttcatggttggcgctgggatttcccCggatgtgtatacgtactcgactctgatcgaagcctactgcaaggtccgggaatttgatactgccaagaaggtgcttgtggaaatgcgtgagagggggtgcggcctgaacaccgtaacctataatgtgctgattgctgggttatgcaggtctggggctgtcgaagaggcgtttgggttcaagaaggacatggaagattatggactagttcctgacggGtttacctatggtgcactcattaacggactgtgcaagagccgtcggtcaaatgaggcgaaggcattgttggacgagatgtcttgtgctgagctaaagcctaatgtcgtagtttatgccaatctgattgatgggtttatgagggagggcaatgcagatgaggcgtttaagatgataaaggagatggttgctgctggtgtgcagccgaacaaaattacctatgacaatcttgttcggggactatgtaagatggggcagatggacagggcttctctacttttgaagcaaatggtcagagatagccataggcctgataccatcacgtacaatctcattattgaaggacatttccgtcatcatagcaaaaaggatgcttttcggcttcttagtgaaatggagaatgctggtatttcccctaatgtatatacttatagcataatgattcatggGctatgccaaagtggtgaaccagaaaaggcaagtgatctccttgaggaaatgactacaaaaggattgaagcctaatgcatttgtttatgcgcctcttatctcagggtactgtagagaaggtaatgtttcattggcatgtgaagttttTgataagatgacaaaggtgaatgtactccctgatttgtactgctacaattctcttatatttggactatctaaggtgggaagggtggaggaatctacaaggtactttgctcagatgcaggagagaggattgctgccaaatgaattcacatacagtggtctcattcatgggtatctaaagaatggtgatctagaaagtgctgaacagttagtgcagcggatgcttgacactggactaaaAccaaatgatgttatcttcattgatctcctagaaagctactttaagtcagatgatattgaaaaggtgtcctctactttcaagtccatgttagaccagggggttatgcttgacaaccgtatctatggaatcttgattcataatctgtccagttctggaaatatggaagcagcatttagggttctttcagagattgagaagaatggatctgttccggatgtgcatgtgtacagctcgttgatatcaggtctttgcaagacagctgacaggGaaaaagcttttggtattcttgatgaaatgtctaagaagggagtagatcctaatattgtatgctataatgccctaattgatgggctgtgcaagtctggtgatatttcttatgcccgcaatgtcttcaatagcatattagctaagggattagtgccaaactgtgtgacatacacaagtttgattgatggaagctgcaaagttggtgacatcagcaatgcattctatctttataatgaaatgctagcaacaggtataacaccagatgcttttgtctatagtgtacttaccactggctgctctagtgctggtgacctTgagcaggcaatgtttctgatTgagGaaatgtttcttaggggacatgcaagtatttcttctttcaataatttagttgatggtttctgcaaacgtggaaagatgcaggaaactttgaagttgttgcatgtgataatgggcaggggcctagtacctaatgccctgactattgaaaacatcatcagtggacttagtgaggctggaaaactcagtgaagtgcacacaatttttgttgagttgcagcagaaaacttcagaaagcactgcccgccacttttcctcattgtttatggacatgataaatcaaggaaaaattcctcttgatgtggttgatgacatgattcgagatcattgtaaagaaggaaatctggacaaggctttaatgctgcgagatgttattgttgcgaaaAgtgcaccaatgggctgctcgtcttatcttgctatagtggacaatctatgccggaagggaaaattaagtgaagcgttgaatttgctgaaagaaatggacaagagagggaaccttcagccaActttggttgctctgcttggcatcttctggttcaggaggcatcatcatatattgaacaaggttgttttcactgtcttcgcaccatctctcatgtttgctagcctggcgaagacggtcacgttgtctgacagaggaatgatcattgccttctgctcaactggaaatcttggcaacttgctcctgattgttgtcccagcagtccgtgacgaagatggcaacccgtttcggaaaagacagcagccgctgccgctctcttgggctctcctattcatcattcttggtgGcttgtacatatggacgcatacgtacagtcttatgaagaagaagagaggtcaaatgtatcaccagcctaacagcattcagggcctggacgacagcaatgaagaacatcatgctaagaaattcaaagcaaatggtgaagctgcttgcgccgatgaggaggcaactcttccggtgtcagctaaactggctgaacacaacgaggagaaccaaAtggaagctccattgctgtctggagagagcgagattgctaagaaaggctcgtggacaacaacaaacttgaaggacaccatccatcatgttgtcgaggagctgatggcaccaccaactctatctgcgatacttggatttgtttttgggctagttccatggttgaaatctcttgtcatcggtgatggcgcccctctcagagtcatccaggactccatccaactgatgggaaatggcacgattccttgcgtcaccctcatccttggtggcaatctgataaaagggctaaggaagttggagttcaagcatacggtgatcatcgcgatcgtctgcatccgctacgtgatccttcctctagtggggattgcagtagttcatgGtgcatactgggtcggattcttgccacacgacccgctgtaccgctacgtgctgatgatgcagttagcgctgccacctgcaatgactattggaaccatggctcaactgtttgatgttgcccaggaggaatgctcagtgatatttctgtggacttacctggtttcttccatttctctcaccacctggtccacgatattcatgtccatcccgtctttaggtcaaagtgcaatgatttcagcatttcagctaactcaaagggaggaggttgaagacaataatacgcctctagaaaagagtcgatccaactga
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| Protein seq | MSLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDLGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEVFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTRYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIFIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESTARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGIFWFRRHHHILNKVVFTVFAPSLMFASLAKTVTLSDRGMIIAFCSTGNLGNLLLIVVPAVRDEDGNPFRKRQQPLPLSWALLFIILGGLYIWTHTYSLMKKKRGQMYHQPNSIQGLDDSNEEHHAKKFKANGEAACADEEATLPVSAKLAEHNEENQMEAPLLSGESEIAKKGSWTTTNLKDTIHHVVEELMAPPTLSAILGFVFGLVPWLKSLVIGDGAPLRVIQDSIQLMGNGTIPCVTLILGGNLIKGLRKLEFKHTVIIAIVCIRYVILPLVGIAVVHGAYWVGFLPHDPLYRYVLMMQLALPPAMTIGTMAQLFDVAQEECSVIFLWTYLVSSISLTTWSTIFMSIPSLGQSAMISAFQLTQREEVEDNNTPLEKSRSN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.356410 | 1.071265 | 0.763721 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0300200 | RBH | 0.000000 | 0.691744 | 3.520967 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g20510 | RBH | 0.796837 | 0.594221 | 0.826552 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0300200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0011230 | RBH | 0.506372 | 3.222914 | 5.201293 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0011150 | RBH | 0.221113 | 2.585009 | 2.038398 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0011160 | RBH | 0.835766 | 3.931796 | 6.542543 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0011030 | RBH | 0.091762 | 0.192818 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0011120 | RBH | 2.979631 | 7.083009 | 11.372471 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0210600 | RBH | 3.0334035 | 12.2986955 | 8.246386 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0011600 | RBH | 0.298768 | 0.333009 | 0.884481 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0212100 | RBH | 2.9535925 | 13.217602 | 15.7057695 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0011080 | RBH | 0.112123 | 0.245661 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0011140 | RBH | 0.454345 | 5.051906 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0011070 | RBH | 2.798569 | 10.596917 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0015560 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0011160 | RBH | 0.136750 | 7.023681 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G011130 | RBH | 0.362178 | 0.751207 | 2.080327 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0010900 | RBH | 1.178510 | 20.563576 | 4.987428 |
