Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_07g0001490 | OGI:07003520 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr07:1096742-1099260 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttagctctccattccagatatatacgatattttgatcacttgcagctttgttgctgcctctctcatgttcattcgttcactgggattctgGcgtgTgcaggaaagtgccactccaagcatgtccaacagcaactggtacactgccttctcttcgtccaacatcgctggagcaagctcctTacaatcttctcggaggtaagtatcaatgatatgagctatcacaactggatagttcctctcgacgaaactgacgatgctaagtccattgcagaacatagaatcagttgGccttttccctgttagcaactccagtagtaccacaccgaagctgtatacatctCctgaggtagagAggaatccgcctccggcatatTctgaattcatgtgaaatgagcaagttaaggtaagagttcatgtaaataatcagttgggtgtcacataagtgcaaaagttacagctagagaaacatacctggggcaatatacccTatagttcctttcaaaccgatcgaactgattgagctcgaatctccaacggcaggTgacatggatttgaggtagaaatgcgctatgccaaaatctcccaaatgagcagtcatatcatggtctaggaggacattacttggctttagatcacagtgtattataggattctcacagtcatggtgtaaatattgcaatgcatctgctatgtcaacagctatttttattctttgggacaggctcagttgatttgaaggctttgtacCacatgtggggtgcagccAagtatccaagttgccattgggcatgaacttgtacactagagccttgaaatcattgcctatattatcaatgttgcgcatgaagttagaacggaagtagattccggtgccgaatgtcctcaaagctttgcattctgtcatgaaacttctatctgcaccttgatatcaagatgaaaaactttcacagcgacaacatgttttgcgtcagctaggttactttgtacactgaaccagtagctcctcccaatcagattagtttctggcaaagttctatgtagcttgagctagatctttaaaagaaactatagcaaactgatcactagaaggcagaaatggtaactgctttctgaacatcttctttctgaaaattgcaaggcaggccagtaatatcagacatacaatgcctaatgtagggaccaataccttgaccaaaaaatgtcgtcgtccagttttactttTataaaCagtggggcatgaaggcataTgtaactccagtactcctccacaaagctgtcggttgccttCaagcaagatggctgtagcatttcTgaatactccatcagttggcactttaccttcaagatgattatatgatagatccaactgggtgagaaactgtagttTgcttagagcaatTgggatagatcctgtcaaAttgttatgcgaaagattgagcatagttaagatgctaaggtttcccagagatgtgggaatgcttcctgagagGaggttttgggccatgTtgatggtttcTaattgctggcatttgcccaaagtaggaggaatttctcCagtaaacttgtttgatgaaagatcaAGAtagctaagctgttgaaggctattaaagaagggatcaggccttgcaaaatttggggataatccacattggacaattgtggtactgtgaagacctctttaggtatgttgccttcaagattgttgtacctgaggtctaactttgagagctgtcgaagttttcctaggctggaTggtatgaggccatggaattgattgtctgaaagaaacaattctgacaTcttggaaatgttgccaatagaaGCtggaatgttcccagtgaagttgttgctatctagatataaagcctgtaaattTaccatgcttccaatacaccatcaatcgaaccagtaaaactgttgaaatcCaatccaagcttAgttaaCctatgaagattTcctatgctcgagggtaccaaccctgaaagcatgttgttactcaaCaCAaggttgtccatggtagaggagaggttgccaatagaatcaggtaggacaccttgcagtagatttcggtgcaatgacaccatgttgagacgtgtgcagttgctcaatgcatctaggaattcccatccccaactgtctcttgcttcaaggtTgctcatgtcaagaccaagcttttcgagctTcatgagtttaccaAGAgaaggagggatTcggcCggttaaccttTgGTtgtatccTaggtgtagccactgcagctgtgaTgcattgcccaatgagtcagggatgcgaccttccaacatgttggcaCccaagatgagttgctgaatgttagggatgaaAttgccaaggtcagatggcaatggaccatgaagcctattatatggcagtgctatttctTgtacatatgacagattgaagagcacatctgggatcctgcctgacagcCgatttccacccagcaacaagtaggacatgtttgacagcctcccaagctcatcaggaatggatccctcgagcat
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| CDS seq | atgctcgagggatccattcctgatgagcttgggaggctgtcaaacatgtcctacttgttgctgggtggaaatcGgctgtcaggcaggatcccagatgtgctcttcaatctgtcatatgtacAagaaatagcactgccatataataggcttcatggtccattgccatctgaccttggcaaTttcatccctaacattcagcaactcatcttggGtgccaacatgttggaaggtcgcatccctgactcattgggcaatgcAtcacagctgcagtggctacacctAggatacaACcAaaggttaaccGgccgAatccctccttcTCTtggtaaactcatgAagctcgaaaagcttggtcttgacatgagcAaccttgaagcaagagacagttggggatgggaattcctagatgcattgagcaactgcacacgtctcaacatggtgtcattgcaccgaaatctactgcaaggtgtcctacctgattctattggcaacctctcctctaccatggacaacctTGtGttgagtaacaacatgctttcagggttggtaccctcgagcataggAaatcttcatagGttaacTaagcttggattGgatttcaacagttttactggttcgattgatgatagcaacaacttcactgggaacattccaGCttctattggcaacatttccaagAtgtcagaattgtttctttcagacaatcaattccatggcctcataccAtccagcctaggaaaacttcgacagctctcaaagttagacctcagccttcaacagcttagctaTCTtgatctttcatcaaacaagtttactGgagaaattcctcctactttgggcaaatgccagcaattAgaaaccatcaAcatggcccaaaacctCctctcaggaagcattcccacatctctgggaaaccttagcatcttaactatgctcaatctttcgcataacaaTttgacaggatctatcccAattgctctaagcAaactacagtttctcacccagttggatctatcatataatcatcttgaaggtaaagtgccaactgatggagtattcAgaaatgctacagccatcttgcttGaaggcaaccgacagctttgtggaggagtactggagttacAtatgccttcatgccccactGtttatAaaagtaaaactggacgacgacattttttggtcaaggtattggtccctacattaggcattgtatgtctgatattactggcctgccttgcaattttcagaaagaagatgttcagaaagcagttaccatttctgccttctagtgatcagtttgctatactcaagctacatagaactttgccagaaactaatctgattgggaggagctactggttcagtgtacaaaatagaagtttcatgacagaatgcaaagctttgaggacattcggcaccggaatctacttccgttctaacttcatgcgcaacattgataatataggcaatgatttcaaggctctagtgtacaagttcatgcccaatggcaacttggatactTggctgcaccccacatgtGAatatgccggaggcggattccTctctacctcagGagatgtatacagcttcggtgtggtactactggagttgctaacagggaaaaggCcaactgattctatgttctgcaatggacttagcatcgtcagtttcgtcgagaggaactatccagttgtgatagctcatatcattgatacttacctccgagaagattgtAaggagcttgctccagcgatgttggacgaagagaaggcagtgtaccagttgctgttggacatgcttggagtggcactttcctgcAcacgCcagaatcccagtgaacgaatgaacatgagagaggcagcaacaaagctgcaagtgatcaaaatatcgtatatatctggaatggagagctaa
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| Protein seq | MLEGSIPDELGRLSNMSYLLLGGNRLSGRIPDVLFNLSYVQEIALPYNRLHGPLPSDLGNFIPNIQQLILGANMLEGRIPDSLGNASQLQWLHLGYNQRLTGRIPPSLGKLMKLEKLGLDMSNLEARDSWGWEFLDALSNCTRLNMVSLHRNLLQGVLPDSIGNLSSTMDNLVLSNNMLSGLVPSSIGNLHRLTKLGLDFNSFTGSIDDSNNFTGNIPASIGNISKMSELFLSDNQFHGLIPSSLGKLRQLSKLDLSLQQLSYLDLSSNKFTGEIPPTLGKCQQLETINMAQNLLSGSIPTSLGNLSILTMLNLSHNNLTGSIPIALSKLQFLTQLDLSYNHLEGKVPTDGVFRNATAILLEGNRQLCGGVLELHMPSCPTVYKSKTGRRHFLVKVLVPTLGIVCLILLACLAIFRKKMFRKQLPFLPSSDQFAILKLHRTLPETNLIGRSYWFSVQNRSFMTECKALRTFGTGIYFRSNFMRNIDNIGNDFKALVYKFMPNGNLDTWLHPTCEYAGGGFLSTSGDVYSFGVVLLELLTGKRPTDSMFCNGLSIVSFVERNYPVVIAHIIDTYLREDCKELAPAMLDEEKAVYQLLLDMLGVALSCTRQNPSERMNMREAATKLQVIKISYISGMES |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_07g0001490 | OsLiXu_07g0001490.01 | Chr07 | 1096742 | 1099260 | - | NAM | ||
| CDS seq | atgctcgagggatccattcctgatgagcttgggaggctgtcaaacatgtcctacttgttgctgggtggaaatcGgctgtcaggcaggatcccagatgtgctcttcaatctgtcatatgtacAagaaatagcactgccatataataggcttcatggtccattgccatctgaccttggcaaTttcatccctaacattcagcaactcatcttggGtgccaacatgttggaaggtcgcatccctgactcattgggcaatgcAtcacagctgcagtggctacacctAggatacaACcAaaggttaaccGgccgAatccctccttcTCTtggtaaactcatgAagctcgaaaagcttggtcttgacatgagcAaccttgaagcaagagacagttggggatgggaattcctagatgcattgagcaactgcacacgtctcaacatggtgtcattgcaccgaaatctactgcaaggtgtcctacctgattctattggcaacctctcctctaccatggacaacctTGtGttgagtaacaacatgctttcagggttggtaccctcgagcataggAaatcttcatagGttaacTaagcttggattGgatttcaacagttttactggttcgattgatgatagcaacaacttcactgggaacattccaGCttctattggcaacatttccaagAtgtcagaattgtttctttcagacaatcaattccatggcctcataccAtccagcctaggaaaacttcgacagctctcaaagttagacctcagccttcaacagcttagctaTCTtgatctttcatcaaacaagtttactGgagaaattcctcctactttgggcaaatgccagcaattAgaaaccatcaAcatggcccaaaacctCctctcaggaagcattcccacatctctgggaaaccttagcatcttaactatgctcaatctttcgcataacaaTttgacaggatctatcccAattgctctaagcAaactacagtttctcacccagttggatctatcatataatcatcttgaaggtaaagtgccaactgatggagtattcAgaaatgctacagccatcttgcttGaaggcaaccgacagctttgtggaggagtactggagttacAtatgccttcatgccccactGtttatAaaagtaaaactggacgacgacattttttggtcaaggtattggtccctacattaggcattgtatgtctgatattactggcctgccttgcaattttcagaaagaagatgttcagaaagcagttaccatttctgccttctagtgatcagtttgctatactcaagctacatagaactttgccagaaactaatctgattgggaggagctactggttcagtgtacaaaatagaagtttcatgacagaatgcaaagctttgaggacattcggcaccggaatctacttccgttctaacttcatgcgcaacattgataatataggcaatgatttcaaggctctagtgtacaagttcatgcccaatggcaacttggatactTggctgcaccccacatgtGAatatgccggaggcggattccTctctacctcagGagatgtatacagcttcggtgtggtactactggagttgctaacagggaaaaggCcaactgattctatgttctgcaatggacttagcatcgtcagtttcgtcgagaggaactatccagttgtgatagctcatatcattgatacttacctccgagaagattgtAaggagcttgctccagcgatgttggacgaagagaaggcagtgtaccagttgctgttggacatgcttggagtggcactttcctgcAcacgCcagaatcccagtgaacgaatgaacatgagagaggcagcaacaaagctgcaagtgatcaaaatatcgtatatatctggaatggagagctaa
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| Protein seq | MLEGSIPDELGRLSNMSYLLLGGNRLSGRIPDVLFNLSYVQEIALPYNRLHGPLPSDLGNFIPNIQQLILGANMLEGRIPDSLGNASQLQWLHLGYNQRLTGRIPPSLGKLMKLEKLGLDMSNLEARDSWGWEFLDALSNCTRLNMVSLHRNLLQGVLPDSIGNLSSTMDNLVLSNNMLSGLVPSSIGNLHRLTKLGLDFNSFTGSIDDSNNFTGNIPASIGNISKMSELFLSDNQFHGLIPSSLGKLRQLSKLDLSLQQLSYLDLSSNKFTGEIPPTLGKCQQLETINMAQNLLSGSIPTSLGNLSILTMLNLSHNNLTGSIPIALSKLQFLTQLDLSYNHLEGKVPTDGVFRNATAILLEGNRQLCGGVLELHMPSCPTVYKSKTGRRHFLVKVLVPTLGIVCLILLACLAIFRKKMFRKQLPFLPSSDQFAILKLHRTLPETNLIGRSYWFSVQNRSFMTECKALRTFGTGIYFRSNFMRNIDNIGNDFKALVYKFMPNGNLDTWLHPTCEYAGGGFLSTSGDVYSFGVVLLELLTGKRPTDSMFCNGLSIVSFVERNYPVVIAHIIDTYLREDCKELAPAMLDEEKAVYQLLLDMLGVALSCTRQNPSERMNMREAATKLQVIKISYISGMES
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.360830 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0121200 | SBH | 0.699423 | 0.635632 | 0.897800 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g03000 | SBH | 0.468402 | 0.430035 | 0.228823 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0121200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0001380 | SBH | 0.0 | 0.0 | 1.377856 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0001410 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0001290 | SBH | 0.000000 | 0.0 | 1.285715 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0001340 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0001330 | SBH | 0.0 | 0.0 | 1.579271 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0019100 | SBH | 0.08714 | 0.037421 | 0.0960795 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0001370 | SBH | 0.0 | 0.0 | 0.329906 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0017200 | SBH | 0.214094 | 0.0794995 | 0.168661 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0001390 | SBH | 0.055009 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0001430 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0001400 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0001460 | RBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0001410 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G001420 | SBH | 0.0 | 0.0 | 0.404693 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0001420 | RBH | 0.0 | 0.0 | 0.0 |
