Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_06g0020390 | OGI:06061370 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr06:23052001-23058205 | ||||||||
| Gene Symbol | KO1, OsKO1, OSKO1, OSKOL1, OsKOS4, CYP701A7 | ||||||||||
| DNA seq | tcacacccttcctctgggcgtgaggtggacatgtagcgggtggagcttgtaggcggtgacctgcgcggtgtccacgttctcctcgtcgccctccctcagcctccacctgaactcctgcacgaagcgcgcgacggcggtgcacgcgatgtgcgtcgcctgcaggctccccgcgcagaccctcctcccggcgccgaacgccatcgtcttgtacttgtccgccacctcgagcctcccgccggtgaacctctccggcgcccactcctccggcgactcccactccttctcgttcatgttgcacccgtacaagttgatcaccatctgccacatgaccatcactttgttagattgtcaggggattttgatcattgatcggcgggccgaccagtgattgaaatgcacgcagctatcccgtccgaaaactctatgagaagtcaagaacgacaagtttgcctggtacgataaaaaaatattggattttgatgggatgtgccagggcaggtttaaaacaagaatatagaagaaaagtgaagcttaatcttcttttttttttcttagctttcctgttttcttatggtccagtgtgggtatagaggtcagatttttatccattatcttataaaataacgcccaaaattttcataagcttccaaagttttgtgaatttggtcaaagttttattcaaattcagttaaaatttcaaataattccgcggaaaaagaagtaccgaaatcactaaaattttggccgaaaccgaaagtgcaaaccctgccagcctgccattgtcgtgtggttgtgcttacctcggtgccggcggagacgtcgtagccggcgagcttggtatcctcgtggacgaacctcggaggtatgagcgggataggagagtggcggcgcagcgtctcgtggaagacggagttgaggtacggcagccgtgggaggtgctcctcggtgaccgtctcgtcgccgcacacatcccggatctcttggtaaagccgttcctggcatgacaagaaaaaggccaaaaaataaaaaaatttggttgataataccaagaatgccgacaatgagctggaacagagtaacaaatatttcttgcctgtttgtcagggttcttggcaagctcatacatggcccattctgcggtgaccaaggtagtatctgcagcctctatgagtgcctcccacaccagcatcgtcagttgctcatctgtcagtgtgttctctgccagcaagaagtccagatagcatgcctttgcctgcacatatatctcagtttcatggagttaaaagatgatctctgtaagTttttttttttttttggcatagaagcaaagatgaaagatgtcatttgtcaaagtattcctttgctcacctctccacgcacaatcctttccttctgctgcttgatcaaggcgcgcatcaccgcagttcgtctagctactgtagtaaacagtcttgtttcgaagctcttgtttggaacccagctgaggtaggggaagaagtctctccagtcgacctcaattgcgcacatcgtcatgtcggtcacagtgatgttgtagatttcctccttcgaaatgtccctcccaaattcatccacatagactgaactcacatcctctcctaaactctgaagtttgcgacattcattgtcagtgccagaaataacaaattgatcatctaacagtttaagttcagagagaatcgaaacctggatcatggacaaccggaatagctcatcctgaaaaacatctctgaacatcagaggagcatgtgggtcatctttcaccagtttatggaaagtgcttaacatgttattgatcatcatatctcttgtgtcacgaaattgtttctgaaatttatggaaaagcattgtgttgtcagaccacagataattttaactctgaaagtgtaactggtagcagaaaatcagtattggaaatgcacactggagttattgagaacaatcagtactaaaaatggaaaatgaaaaatgaaattgttgagaaatatacctgtgcagaagtacccagcatgcttaacatgatataacgcttcgccattttgtggaaatcaccatggtcgctggtagcaaccatggatttatcacgactaatcactgtcagtgcattggatagctttcgggtagatatggatgagaattttgcaaccatcgcctgcaaaagagagtacagtattggtttgtgttatttatgatcaaatcaaatgtgagaccatcattctagagttatgcaagtcaatagaaatgatagacaacttctaagttacctccttggctacttcagttgaattgagcacaactacggaagaagccccggtctttatagtgtagattgggccataaatttcagcccattttgtgaaggcctgatgaggcttcttttctttcaattgatgcagatttccgattatgggtaaaccaggaacggctgcatgacaatgaaataaggaataagttcatttgagatcccttaactttacaccgaatccgattttcatcattgaaccccaaaaccaaatacaacaaatcctgaaccgtcaaaaccagtgcaaacgagatcccttgacggtttggaaggcggttttggctggcatggcacctacatggctgatttgactaggtcttcatcccacatggtattgacgtggcgcttacgtggtagttatatctcggaaaaataataaaaaccgtgggctcatatgtcagctacacacataaaataatttaaaaatagttaaattgtgagacgaatttattaagcctaattaatccgtaaactacgagacaaatttattaagcctaattaatctatcattagcaaatatttactgtagcactacactatcaaatcatggagcaatcaggcctaaaagattcgtctcgcaatttacacgcaatatgtgtaattagttttttcgtttatatttaatactccatgtatgtttccaaacattcgatgtgacaagatgaaaaattttgctagggatctaaacagaccctacatggagtgctaagtatatgcttaattagcagcattactaaaatgaagaccagaaggtcagagagaactaagacccaaaactaaaaacagaaggcacaacaggcttaatatctaaagctaaatcgattagaaccagatgtaatcatattctgcgagtcgtcgtgattggctgtttgttcgtattctgctatccatattctacagttctacgagtcagatagcgttgatcgtgataacatgttaagttttaaggcccattaggccattacaccttacacaccacaacttctaattccttctacggccctctaattccaccgaccacacctccatttatagttcgttttaaataaaatagtagggtggtccgcacatttacaacttgaTttttttaaaagttttaatatctaacaatattactcaaaaacaaatattcacatatttgcatgttggtaatgtgcatttttatctatttacacaatcacacactaccaaagtttctcttattcaaccatcaatacctagtctgcatcatgctcaatcacagttatttgatactccctacaatctagtctctattcaaggatgattgagcaagatgcagactaggtctgcctctcacttattcatacttaattatttgatagtaccagattgagcaggatgcagacctggtcactttcctgtccgaccagtgttgtttctattcaaaatttatttctactctaattttaccaacacagacatacttttgtctttgtcttacgtggatagaaaaggaattttctattctaagggtgtttagatccagtggtgtaaagttttagcgtgtcacatcggttattatatagggtgtcgcatgggggtgttcgggcactaataaaaatactaattacagtatccgtcagtaaaccgtgagacgaatttattaagcctaattaatccgtcattagaacatgtttactatagcaccacattgtcaaatcatggagcaattaggtttaaaagattcgtatcataaagtagtcgcaatctatgcaattagttatttttaagcttatatttaatatatacttcgtgcaggtgttcaaacgttcgatgtgatagggtgtaaaattttggggtgggatctaaacatcctgatattttaggaccatgctaccctcgcacatctacgtccaattaaaaaaaaacattgtattcaaactggaaagcagacagctagtcaaatttgttcatggattcaactactccatatctcaacaattataatatggttccaccacgatctaacagtgtagatttttgtttttttctacaattaatgtcgtaaattctagtctccaatgcaaacgtgacatctccttccaagaatatcttaataatattatagattaatatagtttcatctcaaaccataattaatcttgtgttatgttttagaccaacacttctctcaatattccataacttttacatccaattttagttatatataaagtgtatttccgaatggactctcttttttctttttccccacaaatgttattttatacgtattatttctatatcttcaaatcatactttgaatatttaattattatatattctatggactcctcttggtatgttgtcttatttatttttattatgttttttttccaaattttcatgattcttttaaattttatttggaattagtattataatatagtTTAttatatttttttattttgaatataactaatctcgtgttgtgttacaggttgactcctctttttagtacttctttagttttttttacgagttttagttattcccaaattatatttctatttgaactcttttatttttttattctcaattttaattaatctcatgttgtgtttagaaaaacttttctttgaaaatttcttgttttaatttcaaatttatgttatttctgtatttgaacctctttttctttttcttcaattaatatagaagtttatagcctctgtaacaaaagtggtgcattattttaagttgtcggtttgataaaacgaagacgaaaaaatatttacaccgtgggggtaagctagtgtagtactccctctgtcccacagtaaggtgtgcactcaatttaagattcagttctttaaattttgaccaataatactttattataaattatgtcttatttgacaaaaataatatcattggatttatatttgaatttacatgcatataattgtgattttgttgctacaaatatttttgtataatttatgcagataattgtgattttgtatttttataatttatgcagataatggtcataccgtattcatttttgtatttttttccagatacaaaaccgaataggtcagatatgaaaacaaataagaattatctctattgcaaataatcatcaaatataattcgacgcgaataccaaaaatttatttctcagaacacaaaaaccacctaaacatttaatagaaacaaacaccaacacacataattagctctttttatataataaggttgatcatagactaaacagtgctaattaagttctacatgcatgtataacagagttggtaaaaatacatatataactgatattatgttctaaaaaaactgatattataatatataaatatagtatattttataaaaatatttaaaaatttaaataatattaataataaaatctaaagaggtatgttaaagatgagttagagagaaatggtatatgttttatgtcttcagcagatatgcgatatatgtatccgacgaaaattccgataccatattcttattcacatccgggaaaacaaatatctgtaaaaactatccaataattatccgctccgcacgatatccatattcattttactctgtagcggaaactatccactctaTtttcattgctgattagggtcatcagctgcatgccatctccaacattctaatgaagctagataggtagatatatatccacaggccaggaagcggacggcaaaacacggcaatggatcgatcgaacgatcgacgaacgggcccggtcggccggttacctggaggcgggcggttgcggcggttcttgggcggtgccacggcgagggtcgccgccgcgacgagccccccgacggccgccgccgccacaccgatccctcccgcaccggctgcgagcagtgactccat
More
|
||||||||||
| CDS seq | atggagtcactgctcgcagccggtgcgggagggatcggtgtggcggcggcggccgtcggggggctcgtcgcggcggcgaccctcgccgtggcaccgcccaagaaccgccgcaaccgcccgcctccagaaacaacactggtcggacaggaaagtgaccaggtctgcatcctgctcaatctggccttcacaaaatgggctgaaatttatggcccaatctacactataaagaccggggcttcttccgtagttgtgctcaattcaactgaagtagccaaggaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaatgcactgacagtgattagtcgtgataaatccatggttgctaccagcgaccatggtgatttccacaaaatggcgaagcgttatatcatgttaagcatgctgggtacttctgcacagaaacaatttcgtgacacaagagatatgatgatcaataacatgttaagcactttccataaactggtgaaagatgacccacatgctcctctgatgttcagagatgtttttcaggatgagctattccggttgtccatgatccaggtttcgattctctctgaacttaaactgttagatgatcaatttgttatttctggcactgacaatgaatgtcgcaaacttcagagtttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaggaaatctacaacatcactgtgaccgacatgacgatgtgcgcaattgaggtcgactggagagacttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagactgtttactacagtagctagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggcaaaggcatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgacgatgctggaacggctttaccaagagatccgggatgtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaactccgtcttccacgagacgctgcgccgccactctcctatcccgctcatacctccgaggttcatggtgatcaacttgtacgggtgcaacatgaacgagaaggagtgggagtcgccggaggagtgggcgccggagaggttcaccggcgggaggctcgaggtggcggacaagtacaagacgatggcgttcggcgccgggaggagggtctgcgcggggagcctgcaggcgacgcacatcgcgtgcaccgccgtcgcgcgcttcgtgcaggagttcaggtggaggctgagggagggcgacgaggagaacgtggacaccgcgcaggtcaccgcctacaagctccacccgctacatgtccacctcacgcccagaggaagggtgtga
More
|
||||||||||
| Protein seq | MESLLAAGAGGIGVAAAAVGGLVAAATLAVAPPKNRRNRPPPETTLVGQESDQVCILLNLAFTKWAEIYGPIYTIKTGASSVVVLNSTEVAKEAMVAKFSSISTRKLSNALTVISRDKSMVATSDHGDFHKMAKRYIMLSMLGTSAQKQFRDTRDMMINNMLSTFHKLVKDDPHAPLMFRDVFQDELFRLSMIQVSILSELKLLDDQFVISGTDNECRKLQSLGEDVSSVYVDEFGRDISKEEIYNITVTDMTMCAIEVDWRDFFPYLSWVPNKSFETRLFTTVARRTAVMRALIKQQKERIVRGEAKACYLDFLLAENTLTDEQLTMLERLYQEIRDVCGDETVTEEHLPRLPYLNSVFHETLRRHSPIPLIPPRFMVINLYGCNMNEKEWESPEEWAPERFTGGRLEVADKYKTMAFGAGRRVCAGSLQATHIACTAVARFVQEFRWRLREGDEENVDTAQVTAYKLHPLHVHLTPRGRV |
||||||||||
| Function | Ent-kaurene oxidase-like 3 [UniProtKB/Swiss-Prot:Q5Z5R7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_06g0020390 | OsLiXu_06g0020390.01 | Chr06 | 23052001 | 23058205 | - | NAM | ||
| CDS seq | atggagtcactgctcgcagccggtgcgggagggatcggtgtggcggcggcggccgtcggggggctcgtcgcggcggcgaccctcgccgtggcaccgcccaagaaccgccgcaaccgcccgcctccagaaacaacactggtcggacaggaaagtgaccaggtctgcatcctgctcaatctggccttcacaaaatgggctgaaatttatggcccaatctacactataaagaccggggcttcttccgtagttgtgctcaattcaactgaagtagccaaggaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaatgcactgacagtgattagtcgtgataaatccatggttgctaccagcgaccatggtgatttccacaaaatggcgaagcgttatatcatgttaagcatgctgggtacttctgcacagaaacaatttcgtgacacaagagatatgatgatcaataacatgttaagcactttccataaactggtgaaagatgacccacatgctcctctgatgttcagagatgtttttcaggatgagctattccggttgtccatgatccaggtttcgattctctctgaacttaaactgttagatgatcaatttgttatttctggcactgacaatgaatgtcgcaaacttcagagtttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaggaaatctacaacatcactgtgaccgacatgacgatgtgcgcaattgaggtcgactggagagacttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagactgtttactacagtagctagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggcaaaggcatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgacgatgctggaacggctttaccaagagatccgggatgtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaactccgtcttccacgagacgctgcgccgccactctcctatcccgctcatacctccgaggttcatggtgatcaacttgtacgggtgcaacatgaacgagaaggagtgggagtcgccggaggagtgggcgccggagaggttcaccggcgggaggctcgaggtggcggacaagtacaagacgatggcgttcggcgccgggaggagggtctgcgcggggagcctgcaggcgacgcacatcgcgtgcaccgccgtcgcgcgcttcgtgcaggagttcaggtggaggctgagggagggcgacgaggagaacgtggacaccgcgcaggtcaccgcctacaagctccacccgctacatgtccacctcacgcccagaggaagggtgtga
More
|
|||||||
| Protein seq | MESLLAAGAGGIGVAAAAVGGLVAAATLAVAPPKNRRNRPPPETTLVGQESDQVCILLNLAFTKWAEIYGPIYTIKTGASSVVVLNSTEVAKEAMVAKFSSISTRKLSNALTVISRDKSMVATSDHGDFHKMAKRYIMLSMLGTSAQKQFRDTRDMMINNMLSTFHKLVKDDPHAPLMFRDVFQDELFRLSMIQVSILSELKLLDDQFVISGTDNECRKLQSLGEDVSSVYVDEFGRDISKEEIYNITVTDMTMCAIEVDWRDFFPYLSWVPNKSFETRLFTTVARRTAVMRALIKQQKERIVRGEAKACYLDFLLAENTLTDEQLTMLERLYQEIRDVCGDETVTEEHLPRLPYLNSVFHETLRRHSPIPLIPPRFMVINLYGCNMNEKEWESPEEWAPERFTGGRLEVADKYKTMAFGAGRRVCAGSLQATHIACTAVARFVQEFRWRLREGDEENVDTAQVTAYKLHPLHVHLTPRGRV
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_06g0020390 | OsLiXu_06g0020390.02 | Chr06 | 23052001 | 23058205 | - | NAM | ||
| CDS seq | atggagtcactgctcgcagccggtgcgggagggatcggtgtggcggcggcggccgtcggggggctcgtcgcggcggcgaccctcgccgtggcaccgcccaagaaccgccgcaaccgcccgcctccagaaacaacactggtcggacaggaaagtgaccaggtctgcatcctgctcaatctggccttcacaaaatgggctgaaatttatggcccaatctacactataaagaccggggcttcttccgtagttgtgctcaattcaactgaagtagccaaggaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaatgcactgacagtgattagtcgtgataaatccatggttgctaccagcgaccatggtgatttccacaaaatggcgaagcgttatatcatgttaagcatgctgggtacttctgcacagaaacaatttcgtgacacaagagatatgatgatcaataacatgttaagcactttccataaactggtgaaagatgacccacatgctcctctgatgttcagagatgtttttcaggatgagctattccggttgtccatgatccagagtttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaggaaatctacaacatcactgtgaccgacatgacgatgtgcgcaattgaggtcgactggagagacttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagactgtttactacagtagctagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggcaaaggcatgctatctggacttcttgctggcagagaacacactgacagatgagcaactgacgatgctggtgtgggaggcactcatagaggctgcagatactaccttggaacggctttaccaagagatccgggatgtgtgcggcgacgagacggtcaccgaggagcacctcccacggctgccgtacctcaactccgtcttccacgagacgctgcgccgccactctcctatcccgctcatacctccgaggttcatggtgatcaacttgtacgggtgcaacatgaacgagaaggagtgggagtcgccggaggagtgggcgccggagaggttcaccggcgggaggctcgaggtggcggacaagtacaagacgatggcgttcggcgccgggaggagggtctgcgcggggagcctgcaggcgacgcacatcgcgtgcaccgccgtcgcgcgcttcgtgcaggagttcaggtggaggctgagggagggcgacgaggagaacgtggacaccgcgcaggtcaccgcctacaagctccacccgctacatgtccacctcacgcccagaggaagggtgtga
More
|
|||||||
| Protein seq | MESLLAAGAGGIGVAAAAVGGLVAAATLAVAPPKNRRNRPPPETTLVGQESDQVCILLNLAFTKWAEIYGPIYTIKTGASSVVVLNSTEVAKEAMVAKFSSISTRKLSNALTVISRDKSMVATSDHGDFHKMAKRYIMLSMLGTSAQKQFRDTRDMMINNMLSTFHKLVKDDPHAPLMFRDVFQDELFRLSMIQSLGEDVSSVYVDEFGRDISKEEIYNITVTDMTMCAIEVDWRDFFPYLSWVPNKSFETRLFTTVARRTAVMRALIKQQKERIVRGEAKACYLDFLLAENTLTDEQLTMLVWEALIEAADTTLERLYQEIRDVCGDETVTEEHLPRLPYLNSVFHETLRRHSPIPLIPPRFMVINLYGCNMNEKEWESPEEWAPERFTGGRLEVADKYKTMAFGAGRRVCAGSLQATHIACTAVARFVQEFRWRLREGDEENVDTAQVTAYKLHPLHVHLTPRGRV
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr06 | 23053369 | 23053845 | - | OsLiXu_06g0020390.01 | OsLiXu_06g0020390.02,OsLiXu_06g0020390.01 | All |
| A5 | Chr06 | 23052995 | 23053184 | - | OsLiXu_06g0020390.02 | OsLiXu_06g0020390.02,OsLiXu_06g0020390.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0570566 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g37330 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0570566 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0020090 | SBH | 1.112227 | 21.104042 | 8.408897 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0019910 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0020040 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0019720 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0020210 | SBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0347000 | RBH | 0.0070125 | 0 | 0.013409 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0019660 | SBH | 0.000000 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0321800 | SBH | 7.9898025 | 6.780112 | 6.625054 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0020100 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0020131 | SBH | 0.201552 | 13.715993 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0019740 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0074260 | SBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0019880 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G019760 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0019930 | RBH | 0.0 | 0.0 | 0.0 |
