Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_06g0014540 | OGI:06038000 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr06:13358908-13363399 | ||||||||
| Gene Symbol | PID2, Pi-d2, Pi-d(t)2, PiD2(t), Pid2, PI-D2, Pi-d2(t), OsPK10 | ||||||||||
| DNA seq | aactgctactctctcctctcccaccatttcgtcaccctgcctcctcctgcctctgcctctgctcggctagtctagtgtactactctatcttctcctcctctctttctcctacccaaatccatccacccaacatcttttttctcagccgtcgtctcatctcgccttcgtagcgttgcgtcgcgccgcgtctaccctttccaggtgagcctccccgattacatcgctcgttctagctagctagctagctagctcctgtgttcttgctgtttctttgtttctttttgcgtttttaattttcctttcttggatctttctttgctagctcgttttgatttgtgtgcttctgtatttgtgtgttttgtgggcgaaaggggggctttcttagttcttgttccgggcgattgttattcttgttctggagaatcggattacgagtgtgccttgcagtggagttttgtaatgttaggctccaattgagcaagaaaaagatgaggttcttgttaaattctaggttatccagctcttgtttggttggctggtctggaactctgaattccctctgtagctttttactaggtaatggaatcccctttgtaatgcaaaatgtagatgcctctgccatggctatgttttatctttagatgtccggaattctcttctaagggagcctaaacacggcagttcagttcagattaattatgggtctgggtttgaagaaaagaataaagggagtgaaataaagaaacaaacaggtctgaatttgtgaccctgtttagctgaaagtgaaactgaaaaggggaacagaaaggaagaattgaccatcgatttaatgttaggtgttactgcatatgtgcaagcaaagattgttcttttggcagtggataatgctctgatggtctctggccgtgatcaagtggttgtttttctctgcaggatgtggtttaccttttgctgttggtcaaaaggaacttgtgccaccactttctagtttgtttgttttgacacttggtgctggcaattcggttgctcacgggctgatcaattccttttgctgatttctttttgagagaaatccctttttctttttcttttttatatatatgcctttttatcttgcaactcattcatttctcatgtttctgaaggtaacctggataagacggtggaggagctatcaaatgtttatagaggagctcaagaaaccaatagaaagctctatcaggaactgttcccaattcaggtagtatactggtttccgtttaccaattgtttcttgctatcgatcgatatcattaatcatcatatcttgttcaagccttcttgaaggttcaaacatccttgtaaatctgaactgagacatcatcttagtcactgttgtttgtccagcagcccacctgcatgttcacatgtaatctgacaccactaatttgaacctactgttactgtcaggcattgaaaaaaccaggcatctctgaatatcctctatttgtagctatcatgaacaacctgtttgagacccctcataagattcttgcatgcttgccagtgcaatttagaatcaagttacttagcaaaattttctgaataaattttgtagtatgctcctcagctatatttattctgcctatggtctgatatttctcaccaaacagagcttctaacaatcttcattctgtgcactgcagattatgcaaatgtgtggatggttactgaaggttgttcgttgggaaaacttaaattgtgtgcacatggaagctcatggcaatcgtcgcagcagtccaacataccttgttatgctgtggatgatttcggtagctagcctattgataacatgtcgtggcagtatccagaagcaagttctctttccagggttcactgccgcgcaaatggattacattgataacgatgggatatttctgctttctaatggctctgtctttggctttggttttgtcacgagcaagtggttcatcactactaccacagtctggtctgccaatcctaactctcctgtcacccattcagatgactttttttcgacaaggatggcaatgccttcctgcagtcaggaggaggctccaatgtatgggctgccaatatctccgggaaagggactgccacctctatgcaactactggactctggcaatcttgtagtgcttgggaaagatgcctcttctcctctctggcaaagtttcagccatccgacagacactcttctgtctggtcagaatttcatcgaagggatgacgctgatgagcaagtccaacacagtacagaacatgacctatacacttcagatcaaatctgggaacatgatgttatacgccggcttcgagacacctcaaccatactggtctgcacagcaggatagcaggataattgtcaacaagaacggtgacagcatctactctgcaaacctcagttcagcttcttggtccttctatgatcaatcagggtcccttctatcacaacttgtcatcgcgcaagaaaatgccaatgccacattgtctgctgtccttggtagtgatggattgatagctttctatatgctgcagggtggaaatggcaagagtaaattctcgatcacagttccggcagactcttgtgacatgccagcctactgcagtccttacaccatttgcagtagtgggacaggttgccaatgcccttcggccctcggctcgtttgcaaactgcaatcctggtgttacatcagcatgcaaatcgaacgaggagtttccgctggttcaactggatagtggagttggatatgtaggcactaacttcttccctcctgcggctaagacgaaccttacgggttgtaagagtgcctgtacaggcaactgctcttgtgttgctgtgttctttgatcaatcttcaggcaattgtttccttttcaaccagatcggaagcttgcagcacaaaggtgggaatacaactcgtttcgcatcttttatcaaggtatcaagcagaggaaaaggtgggagtgatagtggcagtgggaagcacaataccattattattgtcattatactcggaactttggctatcataggcgtccttatttatattggtttctggatctacaagaggaagaggcatcctccaccatcacaagacgacgctggttcatcggaagatgatggatttctgcaaacaatatccggagcaccagtgcggttcacttacagggagctccaggatgcgacaagcaacttctgtaacaagcttggtcagggagggtttggatctgtgtatcttggtacactcccagacggcagtcgtattgctgtgaagaagctggagggcataggccaaggaaagaaagagttccgctctgaggtaacgatcattggtagtatccaccacatccatcttgtcaaactccgaggcttttgtactgagggaccacacaggcttcttgcctacgagtacatggcgaatgggtcgctggataagtggattttccattctaaagaagatgatcacctgctcgactgggatacaaggtttaacattgcgcttggaacggcaaagggattggcatacctccatcaggactgcgattcgaagattgtacactgtgacattaagcctgagaatgttctacttgacgacaacttcatcgcaaaggtatctgattttggccttgccaagttgatgaccagggagcagagccatgttttcactacgctcagaggcacgcgtgggtaccttgcacctgagtggctcaccaactatgccatctcagagaagagtgatgtgtacagctacggcatggttttgcttgagataatcggtgggaggaagagctacgatccctcggagatctccgagaaggctcacttcccttcctttgcattcaagaagctggaggaaggtgatcttcaggacatcttcgacgccaagctgaagtacaatgacaaggatgggcgggtcgagaccgcgatcaaggtcgcgctctggtgcatccaggatgatttctaccagagaccatccatgtcaaaggttgtgcagatgctcgaaggcgtctgcgaggtgctccagccaccggtgtcgtcgcagatcgggtacaggctctacgcaaacgccttcaaatcgagcagcgaggaggggacttcatcagggatgtcggactacaacagtgatgctctgctttcagctgtgaggctctctggtcccagatgatgtgaagaatcccatgtacagtgccttgtctagttaggttgcaaagtgtgcaaattttgctgtagtttccagtgttttggtgatcatttgcttcacactattgtacatatcttcttggtcatttctggtggtagtttatacatatcttgctgattatttatggtggtagtttatcggtgccattctttttttgttgcccttttgcttatacataaggtctccaaaacctttgacaattaccttttgtagttatgtcttagtaaaaataataggaaatgcaatgatacaaaagcctttttcatc
More
|
||||||||||
| CDS seq | atgcaaatgtgtggatggttactgaaggttgttcgttgggaaaacttaaattgtgtgcacatggaagctcatggcaatcgtcgcagcagtccaacataccttgttatgctgtggatgatttcggtagctagcctattgataacatgtcgtggcagtatccagaagcaagttctctttccagggttcactgccgcgcaaatggattacattgataacgatgggatatttctgctttctaatggctctgtctttggctttggttttgtcacgagcaagtggttcatcactactaccacagtctggtctgccaatcctaactctcctgatggcaatgccttcctgcagtcaggaggaggctccaatgtatgggctgccaatatctccgggaaagggactgccacctctatgcaactactggactctggcaatcttgtagtgcttgggaaagatgcctcttctcctctctggcaaagtttcagccatccgacagacactcttctgtctggtcagaatttcatcgaagggatgacgctgatgagcaagtccaacacagtacagaacatgacctatacacttcagatcaaatctgggaacatgatgttatacgccggcttcgagacacctcaaccatactggtctgcacagcaggatagcaggataattgtcaacaagaacggtgacagcatctactctgcaaacctcagttcagcttcttggtccttctatgatcaatcagggtcccttctatcacaacttgtcatcgcgcaagaaaatgccaatgccacattgtctgctgtccttggtagtgatggattgatagctttctatatgctgcagggtggaaatggcaagagtaaattctcgatcacagttccggcagactcttgtgacatgccagcctactgcagtccttacaccatttgcagtagtgggacaggttgccaatgcccttcggccctcggctcgtttgcaaactgcaatcctggtgttacatcagcatgcaaatcgaacgaggagtttccgctggttcaactggatagtggagttggatatgtaggcactaacttcttccctcctgcggctaagacgaaccttacgggttgtaagagtgcctgtacaggcaactgctcttgtgttgctgtgttctttgatcaatcttcaggcaattgtttccttttcaaccagatcggaagcttgcagcacaaaggtgggaatacaactcgtttcgcatcttttatcaaggtatcaagcagaggaaaaggtgggagtgatagtggcagtgggaagcacaataccattattattgtcattatactcggaactttggctatcataggcgtccttatttatattggtttctggatctacaagaggaagaggcatcctccaccatcacaagacgacgctggttcatcggaagatgatggatttctgcaaacaatatccggagcaccagtgcggttcacttacagggagctccaggatgcgacaagcaacttctgtaacaagcttggtcagggagggtttggatctgtgtatcttggtacactcccagacggcagtcgtattgctgtgaagaagctggagggcataggccaaggaaagaaagagttccgctctgaggtaacgatcattggtagtatccaccacatccatcttgtcaaactccgaggcttttgtactgagggaccacacaggcttcttgcctacgagtacatggcgaatgggtcgctggataagtggattttccattctaaagaagatgatcacctgctcgactgggatacaaggtttaacattgcgcttggaacggcaaagggattggcatacctccatcaggactgcgattcgaagattgtacactgtgacattaagcctgagaatgttctacttgacgacaacttcatcgcaaaggtatctgattttggccttgccaagttgatgaccagggagcagagccatgttttcactacgctcagaggcacgcgtgggtaccttgcacctgagtggctcaccaactatgccatctcagagaagagtgatgtgtacagctacggcatggttttgcttgagataatcggtgggaggaagagctacgatccctcggagatctccgagaaggctcacttcccttcctttgcattcaagaagctggaggaaggtgatcttcaggacatcttcgacgccaagctgaagtacaatgacaaggatgggcgggtcgagaccgcgatcaaggtcgcgctctggtgcatccaggatgatttctaccagagaccatccatgtcaaaggttgtgcagatgctcgaaggcgtctgcgaggtgctccagccaccggtgtcgtcgcagatcgggtacaggctctacgcaaacgccttcaaatcgagcagcgaggaggggacttcatcagggatgtcggactacaacagtgatgctctgctttcagctgtgaggctctctggtcccagatga
More
|
||||||||||
| Protein seq | MQMCGWLLKVVRWENLNCVHMEAHGNRRSSPTYLVMLWMISVASLLITCRGSIQKQVLFPGFTAAQMDYIDNDGIFLLSNGSVFGFGFVTSKWFITTTTVWSANPNSPDGNAFLQSGGGSNVWAANISGKGTATSMQLLDSGNLVVLGKDASSPLWQSFSHPTDTLLSGQNFIEGMTLMSKSNTVQNMTYTLQIKSGNMMLYAGFETPQPYWSAQQDSRIIVNKNGDSIYSANLSSASWSFYDQSGSLLSQLVIAQENANATLSAVLGSDGLIAFYMLQGGNGKSKFSITVPADSCDMPAYCSPYTICSSGTGCQCPSALGSFANCNPGVTSACKSNEEFPLVQLDSGVGYVGTNFFPPAAKTNLTGCKSACTGNCSCVAVFFDQSSGNCFLFNQIGSLQHKGGNTTRFASFIKVSSRGKGGSDSGSGKHNTIIIVIILGTLAIIGVLIYIGFWIYKRKRHPPPSQDDAGSSEDDGFLQTISGAPVRFTYRELQDATSNFCNKLGQGGFGSVYLGTLPDGSRIAVKKLEGIGQGKKEFRSEVTIIGSIHHIHLVKLRGFCTEGPHRLLAYEYMANGSLDKWIFHSKEDDHLLDWDTRFNIALGTAKGLAYLHQDCDSKIVHCDIKPENVLLDDNFIAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWLTNYAISEKSDVYSYGMVLLEIIGGRKSYDPSEISEKAHFPSFAFKKLEEGDLQDIFDAKLKYNDKDGRVETAIKVALWCIQDDFYQRPSMSKVVQMLEGVCEVLQPPVSSQIGYRLYANAFKSSSEEGTSSGMSDYNSDALLSAVRLSGPR |
||||||||||
| Function | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [UniProtKB/Swiss-Prot:Q8RWZ5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_06g0014540 | OsLiXu_06g0014540.01 | Chr06 | 13358908 | 13363399 | + | NAM | ||
| CDS seq | atgcaaatgtgtggatggttactgaaggttgttcgttgggaaaacttaaattgtgtgcacatggaagctcatggcaatcgtcgcagcagtccaacataccttgttatgctgtggatgatttcggtagctagcctattgataacatgtcgtggcagtatccagaagcaagttctctttccagggttcactgccgcgcaaatggattacattgataacgatgggatatttctgctttctaatggctctgtctttggctttggttttgtcacgagcaagtggttcatcactactaccacagtctggtctgccaatcctaactctcctgatggcaatgccttcctgcagtcaggaggaggctccaatgtatgggctgccaatatctccgggaaagggactgccacctctatgcaactactggactctggcaatcttgtagtgcttgggaaagatgcctcttctcctctctggcaaagtttcagccatccgacagacactcttctgtctggtcagaatttcatcgaagggatgacgctgatgagcaagtccaacacagtacagaacatgacctatacacttcagatcaaatctgggaacatgatgttatacgccggcttcgagacacctcaaccatactggtctgcacagcaggatagcaggataattgtcaacaagaacggtgacagcatctactctgcaaacctcagttcagcttcttggtccttctatgatcaatcagggtcccttctatcacaacttgtcatcgcgcaagaaaatgccaatgccacattgtctgctgtccttggtagtgatggattgatagctttctatatgctgcagggtggaaatggcaagagtaaattctcgatcacagttccggcagactcttgtgacatgccagcctactgcagtccttacaccatttgcagtagtgggacaggttgccaatgcccttcggccctcggctcgtttgcaaactgcaatcctggtgttacatcagcatgcaaatcgaacgaggagtttccgctggttcaactggatagtggagttggatatgtaggcactaacttcttccctcctgcggctaagacgaaccttacgggttgtaagagtgcctgtacaggcaactgctcttgtgttgctgtgttctttgatcaatcttcaggcaattgtttccttttcaaccagatcggaagcttgcagcacaaaggtgggaatacaactcgtttcgcatcttttatcaaggtatcaagcagaggaaaaggtgggagtgatagtggcagtgggaagcacaataccattattattgtcattatactcggaactttggctatcataggcgtccttatttatattggtttctggatctacaagaggaagaggcatcctccaccatcacaagacgacgctggttcatcggaagatgatggatttctgcaaacaatatccggagcaccagtgcggttcacttacagggagctccaggatgcgacaagcaacttctgtaacaagcttggtcagggagggtttggatctgtgtatcttggtacactcccagacggcagtcgtattgctgtgaagaagctggagggcataggccaaggaaagaaagagttccgctctgaggtaacgatcattggtagtatccaccacatccatcttgtcaaactccgaggcttttgtactgagggaccacacaggcttcttgcctacgagtacatggcgaatgggtcgctggataagtggattttccattctaaagaagatgatcacctgctcgactgggatacaaggtttaacattgcgcttggaacggcaaagggattggcatacctccatcaggactgcgattcgaagattgtacactgtgacattaagcctgagaatgttctacttgacgacaacttcatcgcaaaggtatctgattttggccttgccaagttgatgaccagggagcagagccatgttttcactacgctcagaggcacgcgtgggtaccttgcacctgagtggctcaccaactatgccatctcagagaagagtgatgtgtacagctacggcatggttttgcttgagataatcggtgggaggaagagctacgatccctcggagatctccgagaaggctcacttcccttcctttgcattcaagaagctggaggaaggtgatcttcaggacatcttcgacgccaagctgaagtacaatgacaaggatgggcgggtcgagaccgcgatcaaggtcgcgctctggtgcatccaggatgatttctaccagagaccatccatgtcaaaggttgtgcagatgctcgaaggcgtctgcgaggtgctccagccaccggtgtcgtcgcagatcgggtacaggctctacgcaaacgccttcaaatcgagcagcgaggaggggacttcatcagggatgtcggactacaacagtgatgctctgctttcagctgtgaggctctctggtcccagatga
More
|
|||||||
| Protein seq | MQMCGWLLKVVRWENLNCVHMEAHGNRRSSPTYLVMLWMISVASLLITCRGSIQKQVLFPGFTAAQMDYIDNDGIFLLSNGSVFGFGFVTSKWFITTTTVWSANPNSPDGNAFLQSGGGSNVWAANISGKGTATSMQLLDSGNLVVLGKDASSPLWQSFSHPTDTLLSGQNFIEGMTLMSKSNTVQNMTYTLQIKSGNMMLYAGFETPQPYWSAQQDSRIIVNKNGDSIYSANLSSASWSFYDQSGSLLSQLVIAQENANATLSAVLGSDGLIAFYMLQGGNGKSKFSITVPADSCDMPAYCSPYTICSSGTGCQCPSALGSFANCNPGVTSACKSNEEFPLVQLDSGVGYVGTNFFPPAAKTNLTGCKSACTGNCSCVAVFFDQSSGNCFLFNQIGSLQHKGGNTTRFASFIKVSSRGKGGSDSGSGKHNTIIIVIILGTLAIIGVLIYIGFWIYKRKRHPPPSQDDAGSSEDDGFLQTISGAPVRFTYRELQDATSNFCNKLGQGGFGSVYLGTLPDGSRIAVKKLEGIGQGKKEFRSEVTIIGSIHHIHLVKLRGFCTEGPHRLLAYEYMANGSLDKWIFHSKEDDHLLDWDTRFNIALGTAKGLAYLHQDCDSKIVHCDIKPENVLLDDNFIAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWLTNYAISEKSDVYSYGMVLLEIIGGRKSYDPSEISEKAHFPSFAFKKLEEGDLQDIFDAKLKYNDKDGRVETAIKVALWCIQDDFYQRPSMSKVVQMLEGVCEVLQPPVSSQIGYRLYANAFKSSSEEGTSSGMSDYNSDALLSAVRLSGPR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.112291 | 0.381278 | 0.280255 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0494100 | RBH | 0.000000 | 1.089627 | 0.346629 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g29810 | RBH | 0.424559 | 0.584143 | 0.430659 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0494100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0014310 | RBH | 0.391198 | 9.519298 | 3.618771 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0014110 | RBH | 0.077377 | 2.313014 | 0.700404 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0014280 | RBH | 0.000000 | 3.272163 | 1.940126 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0014180 | RBH | 0.127585 | 0.152494 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0014270 | RBH | 4.297233 | 9.778711 | 7.574149 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0221000 | RBH | 6.1570795 | 5.6303255 | 6.5842035 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0013770 | RBH | 0.125461 | 0.248892 | 1.110637 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0214300 | RBH | 7.985183 | 4.5106755 | 6.880201 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0014330 | RBH | 0.123574 | 0.072259 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0014240 | RBH | 0.093900 | 4.431383 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0013950 | RBH | 0.393150 | 5.286530 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0032930 | RBH | 0.164794 | 0.0 | 0.748403 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0014050 | RBH | 0.095493 | 5.611571 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G013930 | RBH | 0.0 | 2.112196 | 1.798920 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0014240 | RBH | 0.244658 | 5.084212 | 1.615630 |
