Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_06g0014110 | OGI:06036520 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr06:12659603-12662078 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | actcccagcagagcaaacaccactccatgtccatggcactgcatcaaacccttctcctcctcttcgtctccatcgccatccaccgcgccgtcgcccagaccaccacctccaccgctgtccgcggcgacggcaaccggttcgtgacctactccttccccagcttcgccaacgcgctgctccacctgcaggccaacctcacggtgctcaacaacgccagcatcagccagggcgccctccagatcacccccgatagcagcaacagcgccgacggctacctcgtcaaccagaccggccgcgtcttcttctccacccccttcaccctctggtcgccggcggctggtggtgggggcaatggcaatggcaatggcacctatgtcgcgtcgttcaacatggtgttcagggtgaacatattccggacgaacaccagcgaccccggcgagggcgtcgcgttcgtcgtggcgtccgggctcgacccgccgcctcccggcagctacggcggcttcctcggcctcacgaacgcgtccaccgacggcgacgacgcgaaccggttcgtggccttggagctcgacacggtgaagcaggggtacgaccccgacgacaaccatgtcggcctcgacgtcaacggcgtccggtcggtgaaggccgtgccgctggcgccgttcggcctcaagctcggcgccgccaacgccagcaacttcttcgtctgggtcgactacgatggcacgtctcgccacgtgtggatgtacatggccaggtccgacgacggcgtgcccagccccaagccgccgtcgccggtgctcgacgcgccgctcgacctctccgcgttcgtcgccgagaaggcctacttcggcttctccgcgtcgacgggcacgcggttccagctcaactgcctgcacatgtggaacatgacggtggagctgctcgacgacggcagccgctcctccggcggcggccagacgcggcggaagctggggctgggcgtcggcgtgccgtgcggcgtcgcggcgctcgccgccggcgctgtggtggcgttcctgtacatcaagaagaggaggcgcagagtcggcgacgatccggagtcgctgtcgtcgccggcggcgttcaagttcaacaagagcagcatcaacctgaggagcctcgccgggacgcccaaggagttcgagtacacggagctgaggaaggggacgaaggacttcgccgcgaagaacaagctcggccagggtggctacggcgtggtgtacaaggccgtcgtcgccggcgacagcgacggcgagagcgtggaggtggccgtcaagcagttctcggcggccaacaccaagggccaggaggacttcctcgccgagctcagcatcatcaaccgcctccgccaccgcaacctcgtccgccttcgcggtgagtgacaaattctcccttgccggagtcggagaagacgagacggctggcttagcttgtgttcatggtgatcgtgttcgagtacagggtggtgccatcagaacggcgtgctgctgctggtgtacgactacatgccgaacggcagcctggacaagcacctcttcggcggcgcggcggtggcgccggtgctgagctgggagcagaggtacaacatcgtcgccggcgtggcggcggcgctgaactacctccaccacgagtacgaccagcgggtgatccaccgcgacatcaagccgtcgaacatcatgctcgactccgccttcggcgcccgcctcggcgacttcggcctcgcccgcgccctcgactccgacaagacctcctacaccgagatggtgggcgtgccggggacgatgggctacatcgcgccggagtgcttccacaccggccgcgccacgcgggagtccgacgtgttcggcctcggcgccgtgctcctcgaggtcgcctgcggccgccgcgtctcgttcggcgccggcggcgacggcggcgccatcggcgggtgcagccggctgctggagtgggtgtggaggctccacggggccggccgcatcctcgacgccgtggacccgaagctcgccggcggcgcgttcgacgcggacgacgccgagcggctcctcctcctggggctcgcgtgcagccacccggaccccggggcgcggcccaccgcgaaggccgtcgtgcaggtgctcgcgcgcgccgtgcccgcgccggccgtgccgccgtccaagccggcgttcatgtggcccgcgctgtcgggggcggactgtgacgacagcgacggcggcggcgccggcgagatgtcgtcgaggcactcggccaggacgaccagcacggaacagaccagctcgacgtactacgcgtcgtcgtcgtcctactcgtcccacggttgcacacgcacgcaggtgacgagcagcggtgacgccattgctgacgagacgaggtacatgtccattggttgattttggatatccgggttccggacgggttcggtacggcggcgccattgttggacatgtgcatgtgcatattc
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| CDS seq | atgtccatggcactgcatcaaacccttctcctcctcttcgtctccatcgccatccaccgcgccgtcgcccagaccaccacctccaccgctgtccgcggcgacggcaaccggttcgtgacctactccttccccagcttcgccaacgcgctgctccacctgcaggccaacctcacggtgctcaacaacgccagcatcagccagggcgccctccagatcacccccgatagcagcaacagcgccgacggctacctcgtcaaccagaccggccgcgtcttcttctccacccccttcaccctctggtcgccggcggctggtggtgggggcaatggcaatggcaatggcacctatgtcgcgtcgttcaacatggtgttcagggtgaacatattccggacgaacaccagcgaccccggcgagggcgtcgcgttcgtcgtggcgtccgggctcgacccgccgcctcccggcagctacggcggcttcctcggcctcacgaacgcgtccaccgacggcgacgacgcgaaccggttcgtggccttggagctcgacacggtgaagcaggggtacgaccccgacgacaaccatgtcggcctcgacgtcaacggcgtccggtcggtgaaggccgtgccgctggcgccgttcggcctcaagctcggcgccgccaacgccagcaacttcttcgtctgggtcgactacgatggcacgtctcgccacgtgtggatgtacatggccaggtccgacgacggcgtgcccagccccaagccgccgtcgccggtgctcgacgcgccgctcgacctctccgcgttcgtcgccgagaaggcctacttcggcttctccgcgtcgacgggcacgcggttccagctcaactgcctgcacatgtggaacatgacggtggagctgctcgacgacggcagccgctcctccggcggcggccagacgcggcggaagctggggctgggcgtcggcgtgccgtgcggcgtcgcggcgctcgccgccggcgctgtggtggcgttcctgtacatcaagaagaggaggcgcagagtcggcgacgatccggagtcgctgtcgtcgccggcggcgttcaagttcaacaagagcagcatcaacctgaggagcctcgccgggacgcccaaggagttcgagtacacggagctgaggaaggggacgaaggacttcgccgcgaagaacaagctcggccagggtggctacggcgtggtgtacaaggccgtcgtcgccggcgacagcgacggcgagagcgtggaggtggccgtcaagcagttctcggcggccaacaccaagggccaggaggacttcctcgccgagctcagcatcatcaaccgcctccgccaccgcaacctcgtccgccttcgcgggtggtgccatcagaacggcgtgctgctgctggtgtacgactacatgccgaacggcagcctggacaagcacctcttcggcggcgcggcggtggcgccggtgctgagctgggagcagaggtacaacatcgtcgccggcgtggcggcggcgctgaactacctccaccacgagtacgaccagcgggtgatccaccgcgacatcaagccgtcgaacatcatgctcgactccgccttcggcgcccgcctcggcgacttcggcctcgcccgcgccctcgactccgacaagacctcctacaccgagatggtgggcgtgccggggacgatgggctacatcgcgccggagtgcttccacaccggccgcgccacgcgggagtccgacgtgttcggcctcggcgccgtgctcctcgaggtcgcctgcggccgccgcgtctcgttcggcgccggcggcgacggcggcgccatcggcgggtgcagccggctgctggagtgggtgtggaggctccacggggccggccgcatcctcgacgccgtggacccgaagctcgccggcggcgcgttcgacgcggacgacgccgagcggctcctcctcctggggctcgcgtgcagccacccggaccccggggcgcggcccaccgcgaaggccgtcgtgcaggtgctcgcgcgcgccgtgcccgcgccggccgtgccgccgtccaagccggcgttcatgtggcccgcgctgtcgggggcggactgtgacgacagcgacggcggcggcgccggcgagatgtcgtcgaggcactcggccaggacgaccagcacggaacagaccagctcgacgtactacgcgtcgtcgtcgtcctactcgtcccacggttgcacacgcacgcaggtgacgagcagcggtgacgccattgctgacgagacgaggtacatgtccattggttga
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| Protein seq | MSMALHQTLLLLFVSIAIHRAVAQTTTSTAVRGDGNRFVTYSFPSFANALLHLQANLTVLNNASISQGALQITPDSSNSADGYLVNQTGRVFFSTPFTLWSPAAGGGGNGNGNGTYVASFNMVFRVNIFRTNTSDPGEGVAFVVASGLDPPPPGSYGGFLGLTNASTDGDDANRFVALELDTVKQGYDPDDNHVGLDVNGVRSVKAVPLAPFGLKLGAANASNFFVWVDYDGTSRHVWMYMARSDDGVPSPKPPSPVLDAPLDLSAFVAEKAYFGFSASTGTRFQLNCLHMWNMTVELLDDGSRSSGGGQTRRKLGLGVGVPCGVAALAAGAVVAFLYIKKRRRRVGDDPESLSSPAAFKFNKSSINLRSLAGTPKEFEYTELRKGTKDFAAKNKLGQGGYGVVYKAVVAGDSDGESVEVAVKQFSAANTKGQEDFLAELSIINRLRHRNLVRLRGWCHQNGVLLLVYDYMPNGSLDKHLFGGAAVAPVLSWEQRYNIVAGVAAALNYLHHEYDQRVIHRDIKPSNIMLDSAFGARLGDFGLARALDSDKTSYTEMVGVPGTMGYIAPECFHTGRATRESDVFGLGAVLLEVACGRRVSFGAGGDGGAIGGCSRLLEWVWRLHGAGRILDAVDPKLAGGAFDADDAERLLLLGLACSHPDPGARPTAKAVVQVLARAVPAPAVPPSKPAFMWPALSGADCDDSDGGGAGEMSSRHSARTTSTEQTSSTYYASSSSYSSHGCTRTQVTSSGDAIADETRYMSIG |
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| Function | Probable L-type lectin-domain containing receptor kinase S.5 [UniProtKB/Swiss-Prot:Q9FG33] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_06g0014110 | OsLiXu_06g0014110.01 | Chr06 | 12659603 | 12662078 | + | NAM | ||
| CDS seq | atgtccatggcactgcatcaaacccttctcctcctcttcgtctccatcgccatccaccgcgccgtcgcccagaccaccacctccaccgctgtccgcggcgacggcaaccggttcgtgacctactccttccccagcttcgccaacgcgctgctccacctgcaggccaacctcacggtgctcaacaacgccagcatcagccagggcgccctccagatcacccccgatagcagcaacagcgccgacggctacctcgtcaaccagaccggccgcgtcttcttctccacccccttcaccctctggtcgccggcggctggtggtgggggcaatggcaatggcaatggcacctatgtcgcgtcgttcaacatggtgttcagggtgaacatattccggacgaacaccagcgaccccggcgagggcgtcgcgttcgtcgtggcgtccgggctcgacccgccgcctcccggcagctacggcggcttcctcggcctcacgaacgcgtccaccgacggcgacgacgcgaaccggttcgtggccttggagctcgacacggtgaagcaggggtacgaccccgacgacaaccatgtcggcctcgacgtcaacggcgtccggtcggtgaaggccgtgccgctggcgccgttcggcctcaagctcggcgccgccaacgccagcaacttcttcgtctgggtcgactacgatggcacgtctcgccacgtgtggatgtacatggccaggtccgacgacggcgtgcccagccccaagccgccgtcgccggtgctcgacgcgccgctcgacctctccgcgttcgtcgccgagaaggcctacttcggcttctccgcgtcgacgggcacgcggttccagctcaactgcctgcacatgtggaacatgacggtggagctgctcgacgacggcagccgctcctccggcggcggccagacgcggcggaagctggggctgggcgtcggcgtgccgtgcggcgtcgcggcgctcgccgccggcgctgtggtggcgttcctgtacatcaagaagaggaggcgcagagtcggcgacgatccggagtcgctgtcgtcgccggcggcgttcaagttcaacaagagcagcatcaacctgaggagcctcgccgggacgcccaaggagttcgagtacacggagctgaggaaggggacgaaggacttcgccgcgaagaacaagctcggccagggtggctacggcgtggtgtacaaggccgtcgtcgccggcgacagcgacggcgagagcgtggaggtggccgtcaagcagttctcggcggccaacaccaagggccaggaggacttcctcgccgagctcagcatcatcaaccgcctccgccaccgcaacctcgtccgccttcgcgggtggtgccatcagaacggcgtgctgctgctggtgtacgactacatgccgaacggcagcctggacaagcacctcttcggcggcgcggcggtggcgccggtgctgagctgggagcagaggtacaacatcgtcgccggcgtggcggcggcgctgaactacctccaccacgagtacgaccagcgggtgatccaccgcgacatcaagccgtcgaacatcatgctcgactccgccttcggcgcccgcctcggcgacttcggcctcgcccgcgccctcgactccgacaagacctcctacaccgagatggtgggcgtgccggggacgatgggctacatcgcgccggagtgcttccacaccggccgcgccacgcgggagtccgacgtgttcggcctcggcgccgtgctcctcgaggtcgcctgcggccgccgcgtctcgttcggcgccggcggcgacggcggcgccatcggcgggtgcagccggctgctggagtgggtgtggaggctccacggggccggccgcatcctcgacgccgtggacccgaagctcgccggcggcgcgttcgacgcggacgacgccgagcggctcctcctcctggggctcgcgtgcagccacccggaccccggggcgcggcccaccgcgaaggccgtcgtgcaggtgctcgcgcgcgccgtgcccgcgccggccgtgccgccgtccaagccggcgttcatgtggcccgcgctgtcgggggcggactgtgacgacagcgacggcggcggcgccggcgagatgtcgtcgaggcactcggccaggacgaccagcacggaacagaccagctcgacgtactacgcgtcgtcgtcgtcctactcgtcccacggttgcacacgcacgcaggtgacgagcagcggtgacgccattgctgacgagacgaggtacatgtccattggttga
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| Protein seq | MSMALHQTLLLLFVSIAIHRAVAQTTTSTAVRGDGNRFVTYSFPSFANALLHLQANLTVLNNASISQGALQITPDSSNSADGYLVNQTGRVFFSTPFTLWSPAAGGGGNGNGNGTYVASFNMVFRVNIFRTNTSDPGEGVAFVVASGLDPPPPGSYGGFLGLTNASTDGDDANRFVALELDTVKQGYDPDDNHVGLDVNGVRSVKAVPLAPFGLKLGAANASNFFVWVDYDGTSRHVWMYMARSDDGVPSPKPPSPVLDAPLDLSAFVAEKAYFGFSASTGTRFQLNCLHMWNMTVELLDDGSRSSGGGQTRRKLGLGVGVPCGVAALAAGAVVAFLYIKKRRRRVGDDPESLSSPAAFKFNKSSINLRSLAGTPKEFEYTELRKGTKDFAAKNKLGQGGYGVVYKAVVAGDSDGESVEVAVKQFSAANTKGQEDFLAELSIINRLRHRNLVRLRGWCHQNGVLLLVYDYMPNGSLDKHLFGGAAVAPVLSWEQRYNIVAGVAAALNYLHHEYDQRVIHRDIKPSNIMLDSAFGARLGDFGLARALDSDKTSYTEMVGVPGTMGYIAPECFHTGRATRESDVFGLGAVLLEVACGRRVSFGAGGDGGAIGGCSRLLEWVWRLHGAGRILDAVDPKLAGGAFDADDAERLLLLGLACSHPDPGARPTAKAVVQVLARAVPAPAVPPSKPAFMWPALSGADCDDSDGGGAGEMSSRHSARTTSTEQTSSTYYASSSSYSSHGCTRTQVTSSGDAIADETRYMSIG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.649199 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0328400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g22290 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0328400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0013780 | RBH | 0.0 | 2.690867 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0013650 | RBH | 0.0 | 5.789840 | 0.133048 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0013730 | RBH | 0.0 | 9.320494 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0013720 | RBH | 0.0 | 0.133530 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0013830 | RBH | 0.0 | 4.331463 | 0.709977 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0211200 | RBH | 0.5663245 | 30.491573 | 0.0078835 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0013330 | RBH | 0.0 | 0.611713 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0206500 | RBH | 0.6761535 | 23.168129 | 0.0778315 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0013850 | RBH | 0.0 | 0.391906 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0013780 | RBH | 0.0 | 1.264565 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0013500 | RBH | 0.0 | 17.496862 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0030830 | RBH | 0.043555 | 4.975313 | 0.689823 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0013630 | RBH | 0.0 | 6.371373 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G013490 | RBH | 0.0 | 0.743668 | 0.148346 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0013790 | RBH | 0.0 | 15.666987 | 0.0 |
