Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_06g0011480 | OGI:06028130 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr06:9538602-9554997 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ccgattcaaagctcccaaatgttgcgttcatatttaacttctttttctgccttcggcttgcatgtcaaatcccattactcactcatattaactcggactcgctcacatcatcaggttgtttatcagacaacaggagccattgtgttaacacataattcagacaatacaacaggagggagccaaacgccaagataaataaacagatgatactataactcgaagaaaaccaattattcttttttttagttacttgctactatgccccctggctacagagtaaggtatacatttgcgaacaagcaaaatttgtggttaacacatactgctttgtaacgacattagcttgcagcttgagttcacttgccaccgaaagaaaaaaaaaaagctatgggtgtatgatctggcaagtttttttgtgctctatacaactgcagaaaatatttaataaaagaatcaaaaatgaaaattgatgggagccgtgaccgtgatcatggcagcaagatgccacctcttgctcaaaatggagattccagtggctgtaccaagacagatgatgcatacaaaaaggtttcctgcacctgtcgacgagctgcgttgtcacaccccggatcctcggctctgatcagaaacaattactggccatgtatggattggcaattttgcgcacagaacaaacatcaacttctcatcaagcttgatcctgatccatgatgaattttgttgtagatggatataaaggcaaatgctcttactgtttgcccgcagtgtgcaagttgtagtttggttttgggaacaggtgctcagttaatgccattcaaggggttctgcctctttcttcgtttttcccttaggacgaccaaactttctcacgtttttaccagtcaagagcttcagtgcacgctcgagggtaatcttctttgggtcagcactctgtcatatacaattttcaagaaattctcaaattgaccctgccatatacatttttttaagaacttctcaaatttaccaaaacaaggaagcacacaaactcaatttgaaaaaaataatatgcaagtctaaagatttttttttttaaaagcaagtcagtaattgcaattgttttcaattagaatttatgaaaacaaaacaatagaacgagcataaaagaatgaacaatgcattgttcgtttctatgctcgttattatggtgtctgatatcaacattcaacagatacaatattcaacaaatacctttggcaaggaagcaagagttctcctgtgtctgatactaaatccagctttagaatgtgtgataagtacaggaagatcatcatcagggtgttttccctgttagacaacaaaaacatcatgggacaactcatcaacgtgtactaatgaacagctaaaatgttagacataccagaattttgggatactgcaatagctcgattgcatctttcagagtgatagagtcaatatctttcacctgaaataaagggtagccatagctaaggttgagttcttgaaaaggtcaataagatagatcattgctaaggacagggttgcgctgtgtttaaaaccagataaagtggaagttacctcagaaagaggagctcttttcggtgatactccctttctatcctctccaacctggacgtagtggccataaggaccttgtttcaaaaacacctgtaaaataagcaacaaaagtatatcataaatatttgttacatgcaaaattacaaagcaggatagccgtagtaaatataccttttcatcagaatcaggtagcgctccaagtaacctaggtgtgaaagtcctttgagtttcatcagatgcttcagtttcatcgtcatcgtctgataacgtgcgagcaatgtacctacaagtttaattacacaatgtgtactcaattataattgagaaatgctggaattagtttataaacagcgctaaaatggataatagcagtgattatactcaatgaattgataatttctatgagaggaacagagggtcatacttgcatttcggatgtcgatcacagcctatgaaatagccctcaccatacctactaactttgaatcttagggttccttcagaacaactgcagatattgcaatcattttaagcacacgttatgcataaggattaaagatggcattgtagttatcggttaacaatgccatattaatatgtagtactccttccgtcccaaaaagagttgatttctggctattttccgggtgcatagccagaaatcaattctttgggacggaagaatatatagtatgaacatgtagatttcacaatatgataaatattaactctctactagaaaatagcttctagagagcgatgacatgaattacctagggcatatcctactatcattgtctaggtcagaaaagaggatggaaccgaatttttcttcaagcattctttctacctgcaacaaagtggatagctcaaatattgttctcaatactcaagggattgcacatctatatgtcaacagtttcatttgctaataactagaataaagatgcataaaaatgattattacaggctgactaatttgtctcatttctcatttcgtagcccaacatttctcatttcttatgccaaagaagaaacattgagatttgcaagtttcaagaaacctaaggcaatgattacatgttacaaatcctacccatagaaaccagaatccttgaatttaataactacaaagatcatttgatggaatcaacaccggatcagcagaggcaacggatcatacgatcttgcacgagaacaggagtttgttcatgcacgaggtcctcgcagaagcactgcacgagcttcaggcatggagagccgcagggtcattaggtttaaaactttccaagatgatgaccagggcctgcatgcccaatccactcccttaccagctggctatctcgtgtatgacgacgatgtacaactttctatctctaatggaaatacatgcatagcttttgcatgttccccccaaaaatagaagggtctggtatcttaattcagttgctatgatttgacaaaagccaatgtgatcatgtggcaaaaataaacttatatgcatcatatggtaactagagcaagctgtaatactgttgctctaggatatattactctcctgttcatttttagagacgcagtttaactttgacttggtaaatatctcaaaattaaaatacaacaccaagatcaaatgaaagtgatttgaaatatgaatttaacgacacaacttttgactctgtaaacttataaagagagaaccatcgtcacttcaaaattacaaaatttgaacctttaaaggcaattgcaccttatgagaaatcaggagtgatttgcgttctacctgtaagggtaaacaaaattatactaggtatctaatgaataaagcagtacctttctgacgtcaaggcgactagcatcgccgcaatatttattgaatcgttcccaaaagtctttcagaaggcccttccattcagttgatccagcagagacattatctagctattaaagcagcaggaaaggagtattaatatgattattataccaataacaacattatcacattaggtggctagctcttcacaagaataggaaaagaagtttatatggtttcacacagatcaacccatgtcagtggaagtttgagtgataggaaaagttacaagaatcctaccgtttacatccatatatactggcatacctcattcaaaatgacaagaaaaaaacatcatcagtggaaacaacaggcctgacctatgatattgaccaacctcgttttgtgtttatatatttcaagctaagcaattctaattttagcatattgacccacatctgtgggagtaactagccagcttaggctgtgttcaggtgttggtgttgggaactaatccctcgcgaacgcaaaacggagtgactcgttagcgcatgattaattaagtaataagtaatagcttttttaaaaaaaatggattaatatgatttttaaaagcaactttcgtatagacctttttgcaaaaaatgcaccattagcagtttggaaagcgtgcgcgtggaaaatgaggtatgtgagttgggaaaataggataaagaacacagccttatgctggtttccgaactcAaaaaataggaaagaagatgcatatataaactacaaaatgaaatttgtttactacctcagtctccatgttagcagtaaagctgagatctgcaacttcagagaaatgatgcataagaaacgccgagacctgaggaagatggtaccgaacatttgtcaaaaatagaagaaatgaaataatttaattaattaaagttatcagaagaaacattgatgtgggaactgaaagaatggaatcacatacaaaaggaaaacataaactatggaatgcacaagtactcatcttgagaaaaatgacataggaagagaaaatagagaaaaatatccatgtggcgattgcatcactgaattacaaatgcctattttgcatccttgattgatcaaaatagataaaacatcccttacaacctaatccacccaggctttgtttgacatggcactgcttttgagattgagattgtgtggttacgtgtatgtttcatcacacgtgacatgcaaatcatccttcacttgtgggaccaaccatgttaagaaaataaaagcagcgaaatgggggatgtaaagggtcattgtcagccaggtggcagcaaagagctcacagaacagtgacagccagatgaggcagcagagtcctgagtctagcatgctgctgcgggtgtttaaaagggacccatcacctgcagcagcagtgtgtcactatcagggaatctccgtagatggcaactttacttgttattagtcctgggtagcgcctacgctcacaagcgcagctctcactatagaactactaccagtgctcctacacatccatgtgaggcatcatgaagaaaaggcacgagacagtgcaggtagttgaacaggatgaagcggaagccacaagggtgaggattggccattggaaatgtgcagatatggtttctgctacaagctggtcttgtggatagttacgaaggcagaagcacaagcacaagcagaaagacattgtaaggtgatgtttgggctctattcaattcatataattgctagctagaatgctagatgccacataaatgcaccattgcctactataacaacatgattggggattgaagtttgaacagtttaactattgaaatttagaaaacttgacaagtttaggggctaatatgtaatttccttacaaaaattacacttctgcgtaatggattatatgatataaggacatattgtctttatttaaaccaatataatgaaaaataaatgtgataaggattatagatttattgccaaataaggctaaaaggaaggttaacatcaggaactataccatccgaccacgaaattcagggtgtagaacccgactttttattgtcacatatttacgatcctgaaaagcaacaggtaaacactgttatccatgtggcttgaatcattgctaattataataatgatgcaagatcctggaactttgcaactgtttattttgtccatgtgttctacaaaaacacaaaataattttcatcatcttacaaatagcaaagtaggcctgcttgatccattgctaacatttgaccccaataaaagacaaacatttctgcatgtacacttcacaaaatctgtatgtttgctaacttgcccagggatgggatgggatgggattggatcccattcaatccctgtcaatccaagttggatgatggattcttggggctgagatgtttccttagccttaccttatttacggccatatattagatgacctagcacccatgtaacaccttagctacagtacctccttgatttctagattcagatcttatcttatgttacaatgaactctaaagcccgatcaacaatttacatggcagtgaactacaattgacatcaacattccagtcccagagcttaatgcccaggatgaccaacatataaactgaccccaataccccatgttagagaccatgaaaaaaaaaaaacttccactggattcgaaaggtccagggtgatgtacgtccattaaagtcctacagttaccagatggtctgtattgcatttcatggtttatgcatcactacaggagtagctacatgagcaacccagaaaaaacatgctgtatgcgcatattagtgtgttcaatgagatatagttctggagataacagagtagatcttagcaatatggcacctgcaatactttcattatagatgcatatgtggatggccttccaattccaagttcttctagctttttaatctgcaaataccaaggaaaaaatgatacattcttaaatatatctgataaaaaggaaatatatttctataccaagcatggaaatgcccagaatgaacagataaaaaaccaacatataggttattactgaccaatgcactctcagaataacgtgatggaggtttagtaaagtgctgtgaaagatgaacgttaactggagacaccaagtccttaacctgagaaaaagaaatgcaacagtaacatgcttatatagttgaaagacagacaacagtgcacattagcataaaaaataggtcatataggaagtgcatagttcaggtaatttgacagctgctgacctctaatttggacaaggcctcaaagttatcctggtgaacagcatcaacctcagaattgtaactggaaggacttgcttcagtgtcctaaaaggatagcaaattttcccgttactgagttaagcaagctaaactgaacactaggcacagagttcttaatagaaacgtaagtactgatcgttagatctccaaaggtaacatattttcttaatagaatattaaacataatgataatcaggacagatccatgcatctcagtgaagatagaatgctcaaatagaagctctctagataattaaaatggaggtagcaccatggcacaatctcgtatgttctacaaaattggcaatttcatgtatcaattactcataatagaattaggatttaggaaacataaaaatggcagaatcaaaagaaaatataggatcacctagtcagatactcagatgtgtgtatccaattctagcttagcagcgcatatgacagataatataactcTttttttaaaaaaagaaaaaactagggtccacatcagcctaagcctaggacttatccaagttgtcccaggatgtcacatggtccatataggcatacatataaaaagaaacaatactgcaaatatggtaaagtcatctagcaatgatgtaatcatcccttgcacaatgacacaatatggtcaatatatcattcaatagatggaacataccatgaagccactgatgcactgagagaaatagcttaaaagagtggaaggccacagtaaaagaattcaacatatttccttataaagttgaggcaggataaagccaaacctaggcaaagacaagtaaactatacaggattttctgaatgtacacaggatgtgacaagcatggatagaaaaagtctacaacttacatcatatacagcttggtatcccttgaagtcaagccttgatgcagatgaatgaaaaatcatgtctccttcagaattaccaatatcaacttgaatctacaatacaattataagaggtcatactctaaacatgaactttgattgaatcttttagatattgaaaaactgcatacatccacaccaaaagatatccagagaatttggcataatacatgctagggaaaatggatcccacttctgtattacaacaccaacatattatatttagcacaaaggcatgccctgccactgtatctggcctcttcgaagtgcttgtcagcagttcataaagcaaattggctattattaaatagaagaccaattactcataagaaatatggatacattcaaccagaattatgcaaagcttagtcacagaaatgaaacactcatctatgaaaggaataaatttgcttggttaccaatgttttttatttgatgacatgtctttgtgaaacaattaggatagaacccaaaagaagaattcatacattcacgaatacttgacacattttgacaatttatattagtcgcagaagcttacagcttctccaatcaactgtttcttgggtggaatttcgtagagtagcctactatatataataccacccaatttacttcattgttttcttcttcttgaggaatcattaggtgattgaatgcatttggtcaaataaatctaaaccatgctttctatagtaagaaaacaatccataatcagaaaagcaacatgtaaaaggaacatcagtagtaaatagccgtagataaaatgaggggaaagtgcaaaccatatcagttctagaagcttccatctggcaagccatagttcttttccatattagagtatacagtttcaaagaatcatcatcaagtgctccgaccaaagatgctgtaagggattttacaacacaactatgtcaaaagacagaaacttatacaaagaactaaagtctgcagaattcaaacaagaccaaagtttatttttggcaacccataataactttgtaaattaacaaaattcatccttcaggcacttttttaatcgtacagaagatgccgacctcgggtgaaaatatatttccagcaaatggaaaaacatttctccctaaatgaagcaaagatggtctaaagtgcaaaatttagtaaaactgtatatgaggctgtttgtaaaacaagcaaggaaatgttagatgttgaatagtgggagacatagtactgcaaagaacagttctattatgcactaaattatacaatacacttttaacagacaacaattaaaacattcatacaccacataccaaagaaaatattagttatgttgatatgtttaagtgcgatatgcacaaattcataaaagctttactgccagctataccatcaaacataccaatttgaaagataaacatgaaacatgtatattggtacaaagcaaaatggtagtttgttgatcttttaagtctgatgtgcactaacttatataagttctattcatatttctaatttttcaacaggttgctagtacgatctatgtagtagagtagtaggcatttgttacttccctgaaagtacatcaaaatattgtaactactgaaagtcattcaaacaattaaaaatccaagaaggacaaataagtaagaaaagcacaatacttcaaattttctgtatactaacatttagtgtgacattcaaagttttcgacaggaagtgacgaaatattggccacctatgaaatctggaaaattagaggcgactagtacataagagatctccaatacccttttttataaccatgtttggtacacaacaaatttggtcatttatatacaataattaattaaatatttacattgtgatctccacaaggcaataggtatatactaaatcaagtctgaaaccaaatgaagttgctggattttttttagataatgaaatgaagttgctagatgtaatgcagcatctgtaatcaatagaacgcaataatttgtaaagaagtgcaggtagatttcattacatggcaacctccttatgctggtcggccttatggcttcatgcgcttcttgagcatttttcaccttcttgaagtattttctaatgccctctgaagcatattcctcaccataccttaaaaagaagaagaatgcagattgcaaatgacatgatggaacacataaagttgattaaaaaggtaaactatcaaaataatgattgcatgagactagcccgtttagcattcaccatccagtgatgtccagttcaaattaaagaacttttgttcgcttatgtactaccaaaagggcacaaaatttagaaagataccactctctcacatttagttgaaaacttaggctgtgttcggcagccaatgatcccaactctcctccctcgttttttgcgcgcacgcttcccaaactgctaacagtgtgttttttgcaaaaaaaaaaaaaaaaaaaagatctatagaacagttgttttaaaaaatcatattaatccatttaaaaaatagctaatacataattaaccatgcgctaataagtcgcgccgttttgcatgtgcatgggattagttcccaacctaaacagcagaatacagccttaattgtgacccttaagcccctacctcacatgcatcaattctccattttgtaataataaccatcaattccacatggtgcatcccactgcttcctccatgcccatggtacattgatttctcactagctaacatcagctaatctcatcccccattctataattcctctagtaggcttatccatctcaggcatttctactcatcagtcatttcacttggttgagcgtggttgcagtggtaacagcatggaaatttcctatagaacgtgggagtggcatgagggttccttttgtcaagtgtaccgtaagcatgaacttttggatatttctccttttacatgcatcttgatatggttgaagataatctcttacatatgtttgggtaaatatagaaatcttcacttaaatcgccactggaatgcctctatctcttggatctgattttgccggtattaaacttgacaacatcagcattaaatgaaatgaaatactccctccatctactttttataatcatatttcatcttggcacaatgaccaaggataagtaattctacttatcatccatttaaacatgctactagttattcctcgtaaacaagcgattcattaatatttacatttctcgatgcccatgtagccaatcttgtgtggaagaatggagagtcacgcattaaatccgagaaagtcattaagaggataggtggttgtattgaaatatgcctatcaaaggtaaatttttcagatttggaaatatgcctatcaaaagtagatggagtatctagtttgagaattgttccttttaagcttcaattccctctccatatcccaatggtacaatcagctaatacatagtgatagatcggtgtttttctagagaatgtaacatttcaatgataaataactgaaacaaaaatatgccatggtatttttcctctgatggtatgaattatgcaaccaaaagttgtgaaactacaaatcagcaagcacagaacaataacttttctgactataaatcagcaagcagagaacaataacttctctgactatataatcaaatgtatctttgcaacaaccaaataggtaaacattaatttatttgatttgaattgaaataaagtggttcataatatacccatcacataagtcctaaactacaatgttcccagcAaaaaaagaaacttgttgccattaaaacaacgatgaataaccacgagaaatgagcacattcccactcatgaattgagaagctaggaattcagattattaagtactacaacaactaatatgttagaagtggaactgtagatattagcacacctaaacaacaaacaaaaaaaaacacttgactagatgttccagtagagcatacctttgcttcactaatgaaagaatatcttctgcagctccatcagatatcttcaaaggaaaacatgaatcatacaagtaagacaacaattccagactatcggagtacagcatcatacaaaccagatcctcaagaaattattgaatcggtaattgactgaaatttctgaattctgatatgaagggatagtgaatagtgcatataatacattcataaaccattgcatcagataattataattgaatagatatatttcatatgattgaattctagttagaattgctactgtacatactcacgcatccatgaatcaaaatggcgatgagtagcgctaatttgaaggcagtactaggatgaaatagtttgccccagagaggagttagaactcattagagctaccatttacagactgggaattagatgttgcggatatggtggatttttcattaaggaaattgcaaatgtatccccctgctagcatgctttgatcgtaggatcaaacttgatcctctacatgaaaaacaaaagtaaaaaagacaatttatctactcactgcctgaagtgcaaaaactaatgaagacctcattatacttcttctcaatggcatcaccTttttttcatgagtgtaccacacttacaaatatagaatttgccacaatcctgttatcatgagcagcgattattgtagcctgtgcagcgctgagctgctcacatgccaggcaggctatgcattcatcatttcatgtcagacaataattccaacatcgacatgccattgatgcatatgttaggactttgatattttgcacccaacagaaattaacctacttttgaacaaggctgtcacaggatagctacataggcaacaaccctatctccacaaacctagagcctcctcaatgccacctctcactcttgagcacagaaatacgcactgccctctagcactttgataccactgacaatgaagacagaacaacgtccctacgctcttagagaataaacactgcctcctatctcctagactccctcagtctcattgtcaggattctttcaatggcattaactgttacaataacacaagtatttcggcatggcatgccaaaatgatctgctgcaccaatggaagagtcttttaggcactggaaaattagtttcgtggcagaaagtatttggtataagtatagaagagcagcatggcgtaatgctttatagtttataccttataatctcaaaaggtaatcacgcgtgcttttatatatagtgggaggaaattgatattttaatgtggatgaccattttaacccataaccatggatatgggaccagattaatatttatgctatcgatactagacaatgctgatttgatcgtaaaggaaaggtaggatgacacctacatgaaaaccatctgttcggatgtatgtaattaacccagttgcttcctcagaggaaaggttaatcccctcatagagcttttgggctacctgcaatcacattgaactatgtgagcaaacagatagctatatctaaattgcattactataataggtcagtaggaaatctcatatacgcatttaagatttaactaacaaccttcatggtatacccagcactaaaatgtagtttgtttgctgcgtcctgctgaaggctggatgttatatatggcataggaggattcttgttaattttacttctcttaattcctgttacttcaaattgggatgaataaatcctcttttctatattgtgtgcttcttcttgagagcgtatagaaagctgatccaacttttttgaattaagatgctttatccgggattgaaggttaaggccatttgaagggccagaatgttgggttttgaagtccgtatcaacagtccagtactcctgcggatcaaactgttctatttcagcctctcgatcacacacaagagccaatgccgcagattggactcgtccagctgactggcaaccaggtagcttcctccataacagtggtgatatgccaaacccaatcaaataatcaagggaacggcgtgctagataggcattcactaggtccatatcaatatatcttggagatattaaagcctttttaacagcatcctctgttatttcatgaaagacaactcttgcaacagtaacttttgaacccaatgcgtcttgctgttcgagcatttctttgatgtgccaagcaattgcttcaccttcacggtcaggatcagacgcaagaatcaaattttctgccctgaagaaggaaaaggacaaagcaattataacaacaaaaaaaaaagagagagatgcacttaatagtgcagtggcaaggggggtgtggtttcaaccccgaggtcccgtgttcaatccccaacacactcacaagttattcttaaaataatgtttggagggacgtctctccctccaaatcttttttttacaacaaaaaaaaaccattagtttgctaatatcgcatagcaaaagaagtcaatcttgctctagacatattgaactaataagaaaatgtacattttatactgttatctatagtataagcataagacatatataaagagaaaaggtaaagttaagtatggtgatattggtatttggtatttcacgataaaagacattttggagccaaacttctaatataacttatgaagcatacatgcaactgatgttacccgaaaagtatgtgattgcgtgtttctttacctttataacaaggcttagtcaacatctaataattgtgtcccttaatgtgcttcgtgtttgtgaaaatgagtatgtatgaagacattttgagcatggtgactagaacctgaccaactgggtcaaggaacaggaaagcaggacaagggtggtggaaatgtggtgactgaaaatgtggattgtgggggtaagttttattcaggacaattgtttacccggcaagtactgcctgtgtaccaccaatattggcagctactattgattaatgatgtcaattcaagatttcaaggtcacagaacatgacaatgatagacaaccgtagcgacaatggtttggaagcaccttattattaaaagaggcaaacaagcatgtatttcatgttaaaaactgaaaatgctaaccatactgcattatcatacccttttaacgccgttcttatgctcttaagatgtgtccaggcagcagcaggaacctcccacaccatactgaagtcatcatcaggacgaacagattttgatcttccagctaaatctctcacatggccataactaggtaacacttcatacatgtccccgaggtatttttgaattacttttgcttttgttactgattcaacaacaagaactgatttagctgtgggagggtaaagaggaacaagtggcttctgctcactaacagaggtcatcgtacaaatctcagctttagctgtcgcgttagaagcagcagattcctgcgcttttgaagatttcttcgacctgcttgatgtcttcttctctttagaactatcggcagccttttttgatttggaaatgtcagacttgctttcttcttggttgaccccaattttcctgctctttgttgctgctgtactagttttaacagatttcctctgtttcttagtagatgccttctcttctttcatatcttcactagcttccttttttctgcttgttggacttttcctccgggtagtagtctttttagtaccagtaccactcttactgcgtttgctagttgatgttgaagcctcatcagtgatggtgccacaagcagccaatgtgcttttccttttctcagatctatgaaacatactgtgtgcaacactcccatcttcctttcgcatatttggattaccaaataagcacttgtttctgatgggaaaagttacctttgtgttgcgcagggtcaaaaaggaccgtgaattatgaatattgttcgccctcaaagaaatcccatgcctatatgcagctctcagacttacaaaattaggattgcccatgagcccagtagtaaaaaaggcaccacttttgagctgcaggggaagacgggagccgattgaagacagctgccttgatgaattattacttaatgaataaggcataaagttgtaagaacatctctgagatacaccaaattgaagctgaaaaggtagcacgtagccaacatttagagaacaagcaaaactctgaatggcataggcataatcacaagtgcgacacagaagcagaattctttgatacgttccaaatagttttatgacaccgatataccacaactttagtaatataccatggaggaagattccagtgtagctagatgctacctttgttttttaacatatgccgccgttaacattttatttcatatttgaccactcgtcttattcaaaaaattcaactagatatatattttgttttgttttgttgtggcttgatttaagcaatacttacattcttaagatttctaaccAaaaaaatttgaataagatgaatggttaaagggtataacataagtcaacggcgtcatcatatatatattaaaaaaacaaaaaaaagggtgtaccattgaacgttgggaaggtctagatatttagcattacatcaattcctgtccttacagccaaaaaatcaaaggggtagaagaggatgggggcacttaccatggccgtaggcgcccccggcggcggcggcagggcgagggaggcggcgcggccggcgtagcggtgcgggatgaggcggcggagctggagcgccatcgggaggggaggagagagcgagaggcggaggcgcggccgcgggcgcacgcactcaggcgaggggggt
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| CDS seq | atggcgctccagctccgccgcctcatcccgcaccgctacgccggccgcgccgcctccctcgccctgccgccgccgccgggggcgcctacggccatgcttcaatttggtgtatctcagagatgttcttacaactttatgccttattcattaagtaataattcatcaaggcagctgtcttcaatcggctcccgtcttcccctgcagctcaaaagtggtgccttttttactactgggctcatgggcaatcctaattttgtaagtctgagagctgcatataggcatgggatttctttgagggcgaacaatattcataattcacggtcctttttgaccctgcgcaacacaaaggtaacttttcccatcagaaacaagtgcttatttggtaatccaaatatgcgaaaggaagatgggagtgttgcacacagtatgtttcatagatctgagaaaaggaaaagcacattggctgcttgtggcaccatcactgatgaggcttcaacatcaactagcaaacgcagtaagagtggtactggtactaaaaagactactacccggaggaaaagtccaacaagcagaaaaaaggaagctagtgaagatatgaaagaagagaaggcatctactaagaaacagaggaaatctgttaaaactagtacagcagcaacaaagagcaggaaaattggggtcaaccaagaagaaagcaagtctgacatttccaaatcaaaaaaggctgccgatagttctaaagagaagaagacatcaagcaggtcgaagaaatcttcaaaagcgcaggaatctgctgcttctaacgcgacagctaaagctgagatttgtacgatgacctctgttagtgagcagaagccacttgttcctctttaccctcccacagctaaatcagttcttgttgttgaatcagtaacaaaagcaaaagtaattcaaaaatacctcggggacatgtatgaagtgttacctagttatggccatgtgagagatttagctggaagatcaaaatctgttcgtcctgatgatgacttcagtatggtgtgggaggttcctgctgctgcctggacacatcttaagagcataagaacggcgttaaaagggtatgataatgcagtatggcagtacttgccgggtgaagcaattgcttggcacatcaaagaaatgctcgaacagcaagacgcattgggttcaaaagttactgttgcaagagttgtctttcatgaaataacagaggatgctgttaaaaaggctttaatatctccaagatatattgatatggacctagtgaatgcctatctagcacgccgttcccttgattatttgattgggtttggcatatcaccactgttatggaggaagctacctggttgccagtcagctggacgagtccaatctgcggcattggctcttgtgtgtgatcgagaggctgaaatagaacagtttgatccgcaggagtactggactgttgatacggacttcaaaacccaacattctggcccttcaaatggccttaaccttcaatcccggataaagcatcttaattcaaaaaagttggatcagctttctatacgctctcaagaagaagcacacaatatagaaaagaggatttattcatcccaatttgaagtaacaggaattaagagaagtaaaattaacaagaatcctcctatgccatatataacatccagccttcagcaggacgcagcaaacaaactacattttagtgctgggtataccatgaaggtagcccaaaagctctatgaggggattaacctttcctctgaggaagcaactgggttaattacatacatccgaacagatggttttcatatatctgatggagctgcagaagatattctttcattagtgaagcaaaggtatggtgaggaatatgcttcagagggcattagaaaatacttcaagaaggtgaaaaatgctcaagaagcgcatgaagccataaggccgaccagcataaggaggttgccatcatctttggtcggagcacttgatgatgattctttgaaactgtatactctaatatggaaaagaactatggcttgccagatggaagcttctagaactgatatgattcaagttgatattggtaattctgaaggagacatgatttttcattcatctgcatcaaggcttgacttcaagggataccaagctgtatatgatgacactgaagcaagtccttccagttacaattctgaggttgatgctgttcaccaggataactttgaggccttgtccaaattagaggttaaggacttggtgtctccagttaacgttcatctttcacagcactttactaaacctccatcacgttattctgagagtgcattgattaaaaagctagaagaacttggaattggaaggccatccacatatgcatctataatgaaagtattgcaggatcgtaaatatgtgacaataaaaagtcgggttctacaccctgaatttcgtggtcggatggtctcggcgtttcttatgcatcatttctctgaagttgcagatctcagctttactgctaacatggagactgagctagataatgtctctgctggatcaactgaatggaagggccttctgaaagacttttgggaacgattcaataaatattgcggcgatgctagtcgccttgacgtcagaaaggtagaaagaatgcttgaagaaaaattcggttccatcctcttttctgacctagacaatgatagtaggatatgccctagttgttctgaaggaaccctaagattcaaagttagtaggtatggtgagggctatttcataggctgtgatcgacatccgaaatgcaagtacattgctcgcacgttatcagacgatgacgatgaaactgaagcatctgatgaaactcaaaggactttcacacctaggttacttggagcgctacctgattctgatgaaaaggtgtttttgaaacaaggtccttatggccactacgtccaggttggagaggatagaaagggagtatcaccgaaaagagctcctctttctgaggtgaaagatattgactctatcactctgaaagatgcaatcgagctattgcagtatcccaaaattctgggaaaacaccctgatgatgatcttcctgtacttatcacacattctaaagctggatttagtatcagacacaggagaactcttgcttccttgccaaagagtgctgacccaaagaagattaccctcgagcgtgcactgaagctcttgactggtaaaaacgtgagaaagtttggtcgtcctaagggaaaaacgaagaaagaggcagaaccccttgaatggcattaa
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| Protein seq | MALQLRRLIPHRYAGRAASLALPPPPGAPTAMLQFGVSQRCSYNFMPYSLSNNSSRQLSSIGSRLPLQLKSGAFFTTGLMGNPNFVSLRAAYRHGISLRANNIHNSRSFLTLRNTKVTFPIRNKCLFGNPNMRKEDGSVAHSMFHRSEKRKSTLAACGTITDEASTSTSKRSKSGTGTKKTTTRRKSPTSRKKEASEDMKEEKASTKKQRKSVKTSTAATKSRKIGVNQEESKSDISKSKKAADSSKEKKTSSRSKKSSKAQESAASNATAKAEICTMTSVSEQKPLVPLYPPTAKSVLVVESVTKAKVIQKYLGDMYEVLPSYGHVRDLAGRSKSVRPDDDFSMVWEVPAAAWTHLKSIRTALKGYDNAVWQYLPGEAIAWHIKEMLEQQDALGSKVTVARVVFHEITEDAVKKALISPRYIDMDLVNAYLARRSLDYLIGFGISPLLWRKLPGCQSAGRVQSAALALVCDREAEIEQFDPQEYWTVDTDFKTQHSGPSNGLNLQSRIKHLNSKKLDQLSIRSQEEAHNIEKRIYSSQFEVTGIKRSKINKNPPMPYITSSLQQDAANKLHFSAGYTMKVAQKLYEGINLSSEEATGLITYIRTDGFHISDGAAEDILSLVKQRYGEEYASEGIRKYFKKVKNAQEAHEAIRPTSIRRLPSSLVGALDDDSLKLYTLIWKRTMACQMEASRTDMIQVDIGNSEGDMIFHSSASRLDFKGYQAVYDDTEASPSSYNSEVDAVHQDNFEALSKLEVKDLVSPVNVHLSQHFTKPPSRYSESALIKKLEELGIGRPSTYASIMKVLQDRKYVTIKSRVLHPEFRGRMVSAFLMHHFSEVADLSFTANMETELDNVSAGSTEWKGLLKDFWERFNKYCGDASRLDVRKVERMLEEKFGSILFSDLDNDSRICPSCSEGTLRFKVSRYGEGYFIGCDRHPKCKYIARTLSDDDDETEASDETQRTFTPRLLGALPDSDEKVFLKQGPYGHYVQVGEDRKGVSPKRAPLSEVKDIDSITLKDAIELLQYPKILGKHPDDDLPVLITHSKAGFSIRHRRTLASLPKSADPKKITLERALKLLTGKNVRKFGRPKGKTKKEAEPLEWH |
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| Function | DNA topoisomerase 1 [UniProtKB/Swiss-Prot:Q4UM42] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_06g0011480 | OsLiXu_06g0011480.01 | Chr06 | 9538602 | 9554930 | - | NAM | ||
| CDS seq | atggcgctccagctccgccgcctcatcccgcaccgctacgccggccgcgccgcctccctcgccctgccgccgccgccgggggcgcctacggccatgcttcaatttggtgtatctcagagatgttcttacaactttatgccttattcattaagtaataattcatcaaggcagctgtcttcaatcggctcccgtcttcccctgcagctcaaaagtggtgccttttttactactgggctcatgggcaatcctaattttgtaagtctgagagctgcatataggcatgggatttctttgagggcgaacaatattcataattcacggtcctttttgaccctgcgcaacacaaaggtaacttttcccatcagaaacaagtgcttatttggtaatccaaatatgcgaaaggaagatgggagtgttgcacacagtatgtttcatagatctgagaaaaggaaaagcacattggctgcttgtggcaccatcactgatgaggcttcaacatcaactagcaaacgcagtaagagtggtactggtactaaaaagactactacccggaggaaaagtccaacaagcagaaaaaaggaagctagtgaagatatgaaagaagagaaggcatctactaagaaacagaggaaatctgttaaaactagtacagcagcaacaaagagcaggaaaattggggtcaaccaagaagaaagcaagtctgacatttccaaatcaaaaaaggctgccgatagttctaaagagaagaagacatcaagcaggtcgaagaaatcttcaaaagcgcaggaatctgctgcttctaacgcgacagctaaagctgagatttgtacgatgacctctgttagtgagcagaagccacttgttcctctttaccctcccacagctaaatcagttcttgttgttgaatcagtaacaaaagcaaaagtaattcaaaaatacctcggggacatgtatgaagtgttacctagttatggccatgtgagagatttagctggaagatcaaaatctgttcgtcctgatgatgacttcagtatggtgtgggaggttcctgctgctgcctggacacatcttaagagcataagaacggcgttaaaagggtatgataatgcagtatggcagtacttgccgggtgaagcaattgcttggcacatcaaagaaatgctcgaacagcaagacgcattgggttcaaaagttactgttgcaagagttgtctttcatgaaataacagaggatgctgttaaaaaggctttaatatctccaagatatattgatatggacctagtgaatgcctatctagcacgccgttcccttgattatttgattgggtttggcatatcaccactgttatggaggaagctacctggttgccagtcagctggacgagtccaatctgcggcattggctcttgtgtgtgatcgagaggctgaaatagaacagtttgatccgcaggagtactggactgttgatacggacttcaaaacccaacattctggcccttcaaatggccttaaccttcaatcccggataaagcatcttaattcaaaaaagttggatcagctttctatacgctctcaagaagaagcacacaatatagaaaagaggatttattcatcccaatttgaagtaacaggaattaagagaagtaaaattaacaagaatcctcctatgccatatataacatccagccttcagcaggacgcagcaaacaaactacattttagtgctgggtataccatgaaggtagcccaaaagctctatgaggggattaacctttcctctgaggaagcaactgggttaattacatacatccgaacagatggttttcatatatctgatggagctgcagaagatattctttcattagtgaagcaaaggtatggtgaggaatatgcttcagagggcattagaaaatacttcaagaaggtgaaaaatgctcaagaagcgcatgaagccataaggccgaccagcataaggaggttgccatcatctttggtcggagcacttgatgatgattctttgaaactgtatactctaatatggaaaagaactatggcttgccagatggaagcttctagaactgatatgattcaagttgatattggtaattctgaaggagacatgatttttcattcatctgcatcaaggcttgacttcaagggataccaagctgtatatgatgacactgaagcaagtccttccagttacaattctgaggttgatgctgttcaccaggataactttgaggccttgtccaaattagaggttaaggacttggtgtctccagttaacgttcatctttcacagcactttactaaacctccatcacgttattctgagagtgcattgattaaaaagctagaagaacttggaattggaaggccatccacatatgcatctataatgaaagtattgcaggatcgtaaatatgtgacaataaaaagtcgggttctacaccctgaatttcgtggtcggatggtctcggcgtttcttatgcatcatttctctgaagttgcagatctcagctttactgctaacatggagactgagctagataatgtctctgctggatcaactgaatggaagggccttctgaaagacttttgggaacgattcaataaatattgcggcgatgctagtcgccttgacgtcagaaaggtagaaagaatgcttgaagaaaaattcggttccatcctcttttctgacctagacaatgatagtaggatatgccctagttgttctgaaggaaccctaagattcaaagttagtaggtatggtgagggctatttcataggctgtgatcgacatccgaaatgcaagtacattgctcgcacgttatcagacgatgacgatgaaactgaagcatctgatgaaactcaaaggactttcacacctaggttacttggagcgctacctgattctgatgaaaaggtgtttttgaaacaaggtccttatggccactacgtccaggttggagaggatagaaagggagtatcaccgaaaagagctcctctttctgaggtgaaagatattgactctatcactctgaaagatgcaatcgagctattgcagtatcccaaaattctgggaaaacaccctgatgatgatcttcctgtacttatcacacattctaaagctggatttagtatcagacacaggagaactcttgcttccttgccaaagagtgctgacccaaagaagattaccctcgagcgtgcactgaagctcttgactggtaaaaacgtgagaaagtttggtcgtcctaagggaaaaacgaagaaagaggcagaaccccttgaatggcattaa
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| Protein seq | MALQLRRLIPHRYAGRAASLALPPPPGAPTAMLQFGVSQRCSYNFMPYSLSNNSSRQLSSIGSRLPLQLKSGAFFTTGLMGNPNFVSLRAAYRHGISLRANNIHNSRSFLTLRNTKVTFPIRNKCLFGNPNMRKEDGSVAHSMFHRSEKRKSTLAACGTITDEASTSTSKRSKSGTGTKKTTTRRKSPTSRKKEASEDMKEEKASTKKQRKSVKTSTAATKSRKIGVNQEESKSDISKSKKAADSSKEKKTSSRSKKSSKAQESAASNATAKAEICTMTSVSEQKPLVPLYPPTAKSVLVVESVTKAKVIQKYLGDMYEVLPSYGHVRDLAGRSKSVRPDDDFSMVWEVPAAAWTHLKSIRTALKGYDNAVWQYLPGEAIAWHIKEMLEQQDALGSKVTVARVVFHEITEDAVKKALISPRYIDMDLVNAYLARRSLDYLIGFGISPLLWRKLPGCQSAGRVQSAALALVCDREAEIEQFDPQEYWTVDTDFKTQHSGPSNGLNLQSRIKHLNSKKLDQLSIRSQEEAHNIEKRIYSSQFEVTGIKRSKINKNPPMPYITSSLQQDAANKLHFSAGYTMKVAQKLYEGINLSSEEATGLITYIRTDGFHISDGAAEDILSLVKQRYGEEYASEGIRKYFKKVKNAQEAHEAIRPTSIRRLPSSLVGALDDDSLKLYTLIWKRTMACQMEASRTDMIQVDIGNSEGDMIFHSSASRLDFKGYQAVYDDTEASPSSYNSEVDAVHQDNFEALSKLEVKDLVSPVNVHLSQHFTKPPSRYSESALIKKLEELGIGRPSTYASIMKVLQDRKYVTIKSRVLHPEFRGRMVSAFLMHHFSEVADLSFTANMETELDNVSAGSTEWKGLLKDFWERFNKYCGDASRLDVRKVERMLEEKFGSILFSDLDNDSRICPSCSEGTLRFKVSRYGEGYFIGCDRHPKCKYIARTLSDDDDETEASDETQRTFTPRLLGALPDSDEKVFLKQGPYGHYVQVGEDRKGVSPKRAPLSEVKDIDSITLKDAIELLQYPKILGKHPDDDLPVLITHSKAGFSIRHRRTLASLPKSADPKKITLERALKLLTGKNVRKFGRPKGKTKKEAEPLEWH
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_06g0011480 | OsLiXu_06g0011480.02 | Chr06 | 9538815 | 9554997 | - | IsoSeq | ||
| CDS seq | ccccctcgcctgagtgcgtgcgcccgcggccgcgcctccgcctctcgctctctcctcccctcccgatggcgctccagctccgccgcctcatcccgcaccgctacgccggccgcgccgcctccctcgccctgccgccgccgccgggggcgcctacggccatgcttcaatttggtgtatctcagagatgttcttacaactttatgccttatt
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| Protein seq | PPRLSACARGRASASRSLLPSRWRSSSAASSRTATPAAPPPSPCRRRRGRLRPCFNLVYLRDVLTTLCLI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.139634 | 0.760058 | 1.156348 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0281400 | RBH | 6.510633 | 5.869898 | 2.943663 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g16980 | RBH | 5.156320 | 4.742339 | 0.849832 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0281400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0011450 | RBH | 0.742336 | 5.693919 | 4.635129 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0011360 | RBH | 0.498105 | 0.000000 | 2.786539 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0011370 | RBH | 1.502535 | 5.716310 | 10.709017 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0011390 | RBH | 0.258513 | 0.081106 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0011490 | RBH | 21.411695 | 5.640472 | 20.133326 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0162300 | RBH | 7.827021 | 6.1530555 | 2.2574145 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0010990 | RBH | 0.546045 | 0.324136 | 1.156227 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0158900 | RBH | 10.3765965 | 6.677282 | 13.905144 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0011480 | RBH | 0.743581 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0011330 | RBH | 1.545116 | 6.922869 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0011300 | RBH | 31.358553 | 17.329723 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0016860 | RBH | 0.817162 | 0.482238 | 0.664049 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0011260 | RBH | 1.083692 | 7.272354 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G011170 | RBH | 0.968894 | 4.087539 | 3.029367 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0011470 | RBH | 4.886576 | 9.292000 | 8.618966 |
