Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_06g0008920 | OGI:06018850 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr06:6807904-6817795 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gtacaaaaaggggtttttctcctgcaatctaattgtcagttccgacgaatttgtcagaatgtgatatacacaggggccctgccagagggcttcttcaagcttgctgattaagatgactgaccttttgtgttgaacaacaatacaattgattgggccttacacattaatactcaacctttgggaaccaaagaaatgacaaggaagaaaaaaaaatgtacagtagttttgcacaaattttccttttccctcctttaccttttcttttgcttgatgggttggctgcttttctaagctcggcatttctttgcctgtggaaaatttacagtgtattcggacgggtggacaaaaatagaacttcacctttttcaccttagccatgcatttgatgttgctatacaaaataatggtatagttacaggtgggcagttactggaaggcatgaaagaccaaggcaccttgttttaacgttgtcgcctggtgttgacctccattttcttagccatctgctcgttgcactcgctgcctttggggttgattggcaggcgtgtttttcaataatggttttaaggaagacatgatctctgaaaatgatggacgcatctttgggtctctgcagcaacagaaaaacaaaatggagttaagatagtggcagaggcagacaagaggaaggcatcaattcaatttattgagaagttcatcacgaaaccaataaatctatccattttgtttagatgagttgcatgtcactatatgtggagaagaatatcttttatccctccacatatagtgacatacaactcatctaaacatactccaaTtttgtatacaaaacacatatcaaattcatggtagttaagtttgcttcgcttgttcatactagttggaataagatagtaaatttgtcaactaaaagaaagtaagtttcataccgttaattcttgtatgaatatgcacatgaaaactaaaagactgtaataatatgaaaatatactttaagtgacaaatgtaatggtatcagtttacatgatcaatcttaacagactttgatatgcagttgttaaagaagtttgactgcatggattttataatgtcataagtttatgaacagtagtagcatatttatacaaagaatgctctacatattcagaaaacagtcactgcagcccagcaaatcaaagcatactcacgtttgccagcatctccttattatctctgctatggtgggatccacatgagctggaatatcaaggcgacgttgctgaaaaccaacagctccaacaacttgcatggggttcataccttcccatggctgaagtagtgtgaaaagttcccataatataaccccgtagctgaaaacatcacatctgcaaaaatgcaaatatatttggcaaatgcaagctgactaaactaaagaaaagataagtcataaaaacatgagaaacctacttctcatcagatggttcgtttcgaagtacttctggtgccatccactctgcctgtatgtcatgcaggtaatcagtaacctctagaaacagctttgtgaagtcaattaattacacattcctatccatagcttacaaaagagcacccagaggcaagaccagtgatgttcaatgctaaaaagcacaatgttaaaccaatcacagcaaatacatggatagatcaaatcaggaaccagctaaactttccatgaataagaccatactatgtctatggtgtccgtattgaattacaggtactgatatttcttcatcaaaccatccgattgatccatttcattttatatactgatatttcttcactgaaccatctgatggaaccatttcattctcataacaacaggaaaacagatacagtttgtagattcaattatggcaatacagaataatcaaaagataaaccaaagatgcaagtttgtaaaagatgagtatcaaaataaatcacaatgaaccatggataagcttctgggcctgaatgtcaacattctcccagttcccaacccttctagctacttgcacaagtcctcaaaaagtaaaatcgattcaggatgcatttgaattattttcctacaatcctactcaatggtactatataaacatcttactattcaatctgttttttggcacacacaattatagcatattttggtcctagatacatgtcatgctacattttcaagatgaactccaatccttttaatgatactttccagttccaataccatttactactctataagagttgattctaacagcaacaattagcatcactaacaacggcagggtggtcttatctatatttaccttattgtttgtcgtgtaaaacactaaacctctatttgagaatgggagagtataactatatcaaaagtcaattaaatactaagcaaaaactacagataagctgcacatataattttttttgttaaaataagagtttcttaatcccataacagctggaaaatatttaattaaaaaaatataagcagcttactgtgccagccgtggatctcgaggaaaggaaggtactattcttcatacgtgataaaccaaaatcacaaacctaaataataaaagaagcaaatggttataagtgccaaacatccaatgcatattactgatgaggcaacctgtttcttaccttcacaacccaattcttgtcaacaagaaggtttggagatttcaaatctcggtgcactacaacaggggagcaattgtgcaaataattcataccacgagcctgaggcaagaagaaaggaagtaagaaacaaatttagcttgaaattctccatctaagtggatcaggatagggaatctttaggcataccacatcaagtgccattcttagacgtcttctttcatccaactggttgttgggtcgatgaatcaatcgaaacaaactacctctacaatgtcaatattaatacattgtagttagcaactatgctggttagaaccctacgacataaaatattagaaccatgatggtattcaactgaaaaatgcttattattttatatgcaactgaacttgctgtctccggtcatgcattatgtattggtttgcatgatgcttggccatcatcttctatatttgttgctaactaaccaatgcaaatttgctgacccagggacaaagctcccccatcttctaaaatcacatgatgtccaaaagaatccaaaatatacatggcgtagacataaagtcatgcatacatgcaaaatttcaatgtccaatctttacatatgtaaacaataaaagaaaaggaactgctaaagaaatttgccatgtgtataaaactattacttgtatttcatcccagaatttctttgagtttttgaaaaagtgtcacccaattcgtacatgcattgtgtaacaaaaaaaaaaactggttgtcctatggaaaacatctcaatttatgaaaaatttggagcagtgcatagggacagagggatttccaattacctatattatttgtttcagaattctgaaacggtgacacccaccactagcccacaacaatatttttttaatgtgtaataagtttccaaaaaggaaattaatgtaaactacttatcacttttgataaaagtcagaaaataatgcgaaagtgaaatgttagtagaataatatttagttaagagagataacaaaaccaggataaaaataagtggttactatacttggtactactaattaagatgttataaattggaaagagaattgcatgaacagagaaaaatgtaccttggaagaaactcggtcacgatagaaagattaggtacacgagtaacagcacccataaatagaacaacatttggatgacgcaatcttttcattatttggaactgcatatcaaggaagagtgaaaaaagcacggacaaaattttggaacatctgcgtgatcattgtaatgatgtaagcatgtcatgtcaaacgcatagtacaaaaaatcagactgggccagcagttaaaccggaaaagaccggaaccaacacccttgatagcttagtttgctctcaagaccatctccgcaattgaactgggatgaaccggctgaaccggacaatgtctcctgtaaaccagtgaaccaacaaaggccagacggtagctcatcatgcgcaccagcagaacttgggctactttaaggaccatatagcgaaactgatgtatcaaggcccatttctttggaatgtaaatcagaaattggtgcggaatggggattgatccctggtggattcaatggaagctccactcccacctaggcagttgaatggttgtggcatagagggaatgttaaatctaactaatgtgtttggattgcggtgaaaccagcagcctgccagtcagaccgatggaccagtgaaccaagtactctaactgattcaatggccagtccgacttttcgtactatggtcaaagtaaaagtcgtcaaacattcaaaccatgttgagggagttaaataagcacttacaaatggcctcagatgcctttatctgttcaacaactagaccaattaattgtcataaactaatataatatttggcctattagtcagaccttatcagctcaggcaaatggatatacaaaatatacaccacaagaaaaatgagctcaaaaccttagctgaatggaatatatgtaaattttgcatctaatatgattcgtttcattgaaccaaaatgattgcctcgtttatgtcacaaaacaaaacatgctgggatgcagtatcaacgctaagttttttttctttttttgcagtcataaatttggattgcagacagttacctcagttctaaattcatccagagcatcgcttgatatatcttgctgcaagaatttcttcactgcgacttcctacacagaggggcaagtaggtaaggcacaaaatgcataacaaataaaggataatgaatatcactctcgagctgctcgaacatagagggaaacaaaggaaggtgctcaagctaatctaatcaagcagttccttggcacatttaTtttaatattattcaactttaagttgtcgaaaaaaaaacaaagtgtcccaggtattttcagcttgtggaatacaaagtcaaaagaaatatttctctaaaatgaatggagtgtcTttttttgtgaagaaatactagcgactactagattacttagaagcacacacataagatgaaaactaacgccggctggcaaaaccaggttacatagtgtccatggtggcaccacggaaccacactcaaaactggccaaagtgggtggagccatccaattagggggttgattaaaatgattgaaagtttagtgtgttaagtggacactaatgatactgattaaaatggaattttccatttatgatttattaagggatatgatataatccccccaattacaattaggtgtgctggtgcaacctgtagaaacagttgttgtagtatgcgaccaaccagaaactataatgtaaagatatccaagctttttgctatattgacaaggctagaacttaaaaaagacacaggttaatgaggttagttgatcctcacatgatatgttgactatgctataacaagaacttaatgtcttgattgcacacggattcattagaacaaaagtttgctttcattatttcaacttggtgataatttagaaatatggtattgcggtgagccatattaggtgaaaaacttactgttccatgccattcccctttgtacacctctccaaaggatcctgatgcacagaaaaaggaggaagttgaaacaagatggaaaatatgatacaagtatacaacattattgtatgcggcttttattcaatttaatggggaggtaatgctcatgaatgggaaaattagctgagtaatcctgcagatagtcaaaacatagtaggggagctatgaacaaaatgaatttaaagaaaccaagagaagtgtacctagcccaacacgttctcccagagtgatctcttcccattggatttcaaactctgcaacaccatctagggcaatatcagatcttgagctttcagtcccaaccgacttgtcagagactctttcagcttcctgaggtacttcaaccaaatctttttctttctcgggaacactagtttgtccatgatcaatttcaaactgattatcccagaagtcatgtctacccttcgggatcaattcatttgcccctgaagaacttggcaaactaagcaattgacaaccaggttccaagtattcgtactgcttgttaacagcagcagttgtagccacaactgcagcagcagtcgccgcagcagcaacaggcacgtcgagtttgatatcactgttagatttagctgcagcgacaaccattgaggatgcaaccactgcagcggttgcaacagcagctgctgcaacaggcatttgttttataagttgtagtggatcctcctggggaggtgcagatggttcatacgtatgtgaactaccagtactgttccgggaatctgagggatggtaggtacccagcccctggataggtttaagatccagaggaatccgataaggaacagcctttgtttggagttcatgtccagggggatgtggcaccgaaggaccatgacaaaaatcagcgtttgttgtagattcaagctcattcatcctctttatcatttcatctttagtttgaaacagagatgtgtcatacacaataaggtctttaggttgttcccttgattcttctgaaaacaaatcaggtggtgggacaactccattttcaagtaagacagcatggatcctctcagctatctgggggttttcttttgcagcactaatcatatattctgagacatctttcactttcatccttcgtactgctggagcaccacccacctcagaagatgaaggagaacttgatgacgaattattcgctgcagaggacttatctttgctctgtgtactcatggtatggtctgtatttctagattcatgaataacaggcaaattttcacttatgcttgtgctaattgatagttccccaaatgaaccagataccgctgatccctggctgccagtctggccagttgttatgccataaggatcagaatgcccaaaattgctgggtgtggatactttttcaagtgactcattctcaaaagaaccatacatagaacttgagacttcactaaaggaagactccaactgagtgttacagtcatctttgttaacatggtgactatctgcaaataaactatcttcaaattctctacccaagcccgcaccgtctgaaggtataagagtacctggatctgacatgagatcaacaatgtactccctgcaataatataatacagtgcaggcagcattacaagaagtttttccatacttaccatttagattgttaacaaacatgtgaggaggaaaaatggatggccagacacaactatactaagcaagtaagcattaatatcacttttatccaagtataaaagtcctagtttctgttgtcaaggaattagtaaataccttccatcattaactttcacaatgctctagatgtccagatacaattatgctaagcaagtaaacattaataacatccaagtctaaaagccctagtttatattttcaaggaattagtaagtaccttccatcattaaatttcacaatgctcaaagctccatcatccgatccagtgtactgtcttcctttaactagtcgacaaggaacagcgaggctgtcggccaaaacctagatgcaagtttgcaaatgtagatattagcatttacacatctccaagccacaaaacctttaatgaagtgatgcttatgcattaaatccactatgtcatgaatccggtacaaggactaaaagtctagaacaagaatgaagccaggtcttgtgctactgatagaacgagaacaagaatgtgccatgtcatattgtgcactgaacagaaatttgataacaatagagcagatattgcatttgaaaattaatggacgtcaatatctgctatctaaaaaacatcataattagaaaaggaaatgatggcttagatggatggccgaaatccaatagtcactaaccttaaaaagcagtgcacggtgacgagccagaccaattgttaactcaccgagaggcataacagcacttcttatactagctctcagagagctgctcacattctggtacttggacaaaaagctttctggatcgatgactggtccacccatgtagtcggaaactaaagtagctagtctctggaccaggttgtgcccaacaaactctggagttttcgagcgaacttccacagccatgatgagtgccttctgctcaagttgtacaagtttggtgtcttgtgctctgttgaccaatacggcttctgttttggatgcatgtgaaaatggctgttgatgcagttccgtcaaggagggtatggttggcaatgtgggctcgtccccaatgacaaaaatgtcatagaaaccatccaagattttgtcgtcgtagctaagggcactgaaactctgtgaagcacgaacaaatctaccatatgaggcaagtacgaaaatggtaagagtcacaaataagtagggcaatattcacttgtgaacaatttatactgaaaagaaagcatctaagttggtcatttgaggactacaagctgagtgttcatttgcctcattatcgttagacagtaccatccacaaaaagaaaggcagcttgatcagccattattctggtaagtgataacacctcaacaaaggaccaaggaccaccacaaaagttcatagactgcttgttttgctccaaaagtgctaatagtctgaatgctaatagctgcttaatccacggggtgctatttctcactaacatcattgcagataaaccaaatggccaaaatgagtatgtataggttacataactaccacaagttcggccacccctttcatgactgaacaacagttatcagactgtagatgaacataccatgatcaacccatctcatgacagctatttcatcaacaaaaacaccatccttcccattttgttaccactaataactaatcgaatggtttgtatttgaacgtctaagtttactcaacaaagcaagagcgagatcccatcgcagtaaacaatgcgaacaacgtgcgacgcgaggagcaaaaaccaaaaagattaggatcgagcaggagggatgagacggtgagagtacccagtagcggaaggcgacgacctcggcgggggagctctggagcgggcaggagccgagactgatctgcttggctacctcgatctgcgtcgcctcgggatcctcccgcgcgctcatctccagcgcgagctgcatgtggtactcctccagctccgcctcctgcttctccttctccatctccctcttcctcaccgactcctcccgcgactccctcctcgccttctcctcctcctcctcgacctccagcctcctcacctccaccgacgacgccaacgccgccgcctccgcctccaccaccgcgtccgccgcaaacggccgcgatggcgatggcgatggcgacggctgcgtctgcggccgcccggtcacggagctaagccagctcgagatcccagaaccgtgcttatgctcgtgctgcgctccaccaccaccgccacctccaccgcctccgccgccctttttggagaccggcggaggaggcgcgagcgacgaggcgccatcgccggccgagtcgccgatgtggagcttccggaggaagttcttcatcccgctcccgccaccgtctccgccgccgccgctaccgatgctggtggtggtggggcggtggatccaacatggcttcggatgcggaggcgaatggaagagaagagaagagcacagcgagaggaaggaggaggagtcgcagtattgacctgcctacgagcagttccaagccgcatt
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| CDS seq | atgaagaacttcctccggaagctccacatcggcgactcggccggcgatggcgcctcgtcgctcgcgcctcctccgccggtctccaaaaagggcggcggaggcggtggaggtggcggtggtggtggagcgcagcacgagcataagcacggttctgggatctcgagctggcttagctccgtgaccgggcggccgcagacgcagccgtcgccatcgccatcgccatcgcggccgtttgcggcggacgcggtggtggaggcggaggcggcggcgttggcgtcgtcggtggaggtgaggaggctggaggtcgaggaggaggaggagaaggcgaggagggagtcgcgggaggagtcggtgaggaagagggagatggagaaggagaagcaggaggcggagctggaggagtaccacatgcagctcgcgctggagatgagcgcgcgggaggatcccgaggcgacgcagatcgaggtagccaagcagatcagtctcggctcctgcccgctccagagctcccccgccgaggtcgtcgccttccgctactgggtactctcaccatttgttcgtgcttcacagagtttcagtgcccttagctacgacgacaaaatcttggatggtttctatgacatttttgtcattggggacgagcccacattgccaaccataccctccttgacggaactgcatcaacagccattttcacatgcatccaaaacagaagccgtattggtcaacagagcacaagacaccaaacttgtacaacttgagcagaaggcactcatcatggctgtggaagttcgctcgaaaactccagagtttgttgggcacaacctggtccagagactagctactttagtttccgactacatgggtggaccagtcatcgatccagaaagctttttgtccaagtaccagaatgtgagcagctctctgagagctagtataagaagtgctgttatgcctctcggtgagttaacaattggtctggctcgtcaccgtgcactgctttttaaggttttggccgacagcctcgctgttccttgtcgactagttaaaggaagacagtacactggatcggatgatggagctttgagcattgtgaaatttaatgatggaagggagtacattgttgatctcatgtcagatccaggtactcttataccttcagacggtgcgggcttgggtagagaatttgaagatagtttatttgcagatagtcaccatgttaacaaagatgactgtaacactcagttggagtcttcctttagtgaagtctcaagttctatgtatggttcttttgagaatgagtcacttgaaaaagtatccacacccagcaattttgggcattctgatccttatggcataacaactggccagactggcagccagggatcagcggtatctggttcatttggggaactatcaattagcacaagcataagtgaaaatttgcctgttattcatgaatctagaaatacagaccataccatgagtacacagagcaaagataagtcctctgcagcgaataattcgtcatcaagttctccttcatcttctgaggtgggtggtgctccagcagtacgaaggatgaaagtgaaagatgtctcagaatatatgattagtgctgcaaaagaaaacccccagatagctgagaggatccatgctgtcttacttgaaaatggagttgtcccaccacctgatttgttttcagaagaatcaagggaacaacctaaagaccttattgtgtatgacacatctctgtttcaaactaaagatgaaatgataaagaggatgaatgagcttgaatctacaacaaacgctgatttttgtcatggtccttcggtgccacatccccctggacatgaactccaaacaaaggctgttccttatcggattcctctggatcttaaacctatccaggggctgggtacctaccatccctcagattcccggaacagtactggtagttcacatacgtatgaaccatctgcacctccccaggaggatccactacaacttataaaacaaatgcctgttgcagcagctgctgttgcaaccgctgcagtggttgcatcctcaatggttgtcgctgcagctaaatctaacagtgatatcaaactcgacgtgcctgttgctgctgcggcgactgctgctgcagttgtggctacaactgctgctgttaacaagcagtacgaatacttggaacctggttgtcaattgcttagtttgccaagttcttcaggggcaaatgaattgatcccgaagggtagacatgacttctgggataatcagtttgaaattgatcatggacaaactagtgttcccgagaaagaaaaagatttggttgaagtacctcaggaagctgaaagagtctctgacaagtcggttgggactgaaagctcaagatctgatattgccctagatggtgttgcagagtttgaaatccaatgggaagagatcactctgggagaacgtgttgggctaggatcctttggagaggtgtacaaaggggaatggcatggaacagaagtcgcagtgaagaaattcttgcagcaagatatatcaagcgatgctctggatgaatttagaactgagttccaaataatgaaaagattgcgtcatccaaatgttgttctatttatgggtgctgttactcgtgtacctaatctttctatcgtgaccgagtttcttccaagaggtagtttgtttcgattgattcatcgacccaacaaccagttggatgaaagaagacgtctaagaatggcacttgatgtggctcgtggtatgaattatttgcacaattgctcccctgttgtagtgcaccgagatttgaaatctccaaaccttcttgttgacaagaattgggttgtgaaggtttgtgattttggtttatcacgtatgaagaatagtaccttcctttcctcgagatccacggctggcacagcagagtggatggcaccagaagtacttcgaaacgaaccatctgatgagaaatgtgatgttttcagctacggggttatattatgggaacttttcacactacttcagccatgggaaggtatgaaccccatgcaagttgttggagctgttggttttcagcaacgtcgccttgatattccagctcatgtggatcccaccatagcagagataataaggagatgctggcaaacagacccaaagatgcgtccatcattttcagagatcatgtcttccttaaaaccattattgaaaaacacgcctgccaatcaaccccaaaggcagcgagtgcaacgagcagatggctaa
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| Protein seq | MKNFLRKLHIGDSAGDGASSLAPPPPVSKKGGGGGGGGGGGGAQHEHKHGSGISSWLSSVTGRPQTQPSPSPSPSRPFAADAVVEAEAAALASSVEVRRLEVEEEEEKARRESREESVRKREMEKEKQEAELEEYHMQLALEMSAREDPEATQIEVAKQISLGSCPLQSSPAEVVAFRYWVLSPFVRASQSFSALSYDDKILDGFYDIFVIGDEPTLPTIPSLTELHQQPFSHASKTEAVLVNRAQDTKLVQLEQKALIMAVEVRSKTPEFVGHNLVQRLATLVSDYMGGPVIDPESFLSKYQNVSSSLRASIRSAVMPLGELTIGLARHRALLFKVLADSLAVPCRLVKGRQYTGSDDGALSIVKFNDGREYIVDLMSDPGTLIPSDGAGLGREFEDSLFADSHHVNKDDCNTQLESSFSEVSSSMYGSFENESLEKVSTPSNFGHSDPYGITTGQTGSQGSAVSGSFGELSISTSISENLPVIHESRNTDHTMSTQSKDKSSAANNSSSSSPSSSEVGGAPAVRRMKVKDVSEYMISAAKENPQIAERIHAVLLENGVVPPPDLFSEESREQPKDLIVYDTSLFQTKDEMIKRMNELESTTNADFCHGPSVPHPPGHELQTKAVPYRIPLDLKPIQGLGTYHPSDSRNSTGSSHTYEPSAPPQEDPLQLIKQMPVAAAAVATAAVVASSMVVAAAKSNSDIKLDVPVAAAATAAAVVATTAAVNKQYEYLEPGCQLLSLPSSSGANELIPKGRHDFWDNQFEIDHGQTSVPEKEKDLVEVPQEAERVSDKSVGTESSRSDIALDGVAEFEIQWEEITLGERVGLGSFGEVYKGEWHGTEVAVKKFLQQDISSDALDEFRTEFQIMKRLRHPNVVLFMGAVTRVPNLSIVTEFLPRGSLFRLIHRPNNQLDERRRLRMALDVARGMNYLHNCSPVVVHRDLKSPNLLVDKNWVVKVCDFGLSRMKNSTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVFSYGVILWELFTLLQPWEGMNPMQVVGAVGFQQRRLDIPAHVDPTIAEIIRRCWQTDPKMRPSFSEIMSSLKPLLKNTPANQPQRQRVQRADG |
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| Function | Probable serine/threonine-protein kinase SIS8 [UniProtKB/Swiss-Prot:Q9C9U5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_06g0008920 | OsLiXu_06g0008920.01 | Chr06 | 6807904 | 6817765 | - | NAM | ||
| CDS seq | atgaagaacttcctccggaagctccacatcggcgactcggccggcgatggcgcctcgtcgctcgcgcctcctccgccggtctccaaaaagggcggcggaggcggtggaggtggcggtggtggtggagcgcagcacgagcataagcacggttctgggatctcgagctggcttagctccgtgaccgggcggccgcagacgcagccgtcgccatcgccatcgccatcgcggccgtttgcggcggacgcggtggtggaggcggaggcggcggcgttggcgtcgtcggtggaggtgaggaggctggaggtcgaggaggaggaggagaaggcgaggagggagtcgcgggaggagtcggtgaggaagagggagatggagaaggagaagcaggaggcggagctggaggagtaccacatgcagctcgcgctggagatgagcgcgcgggaggatcccgaggcgacgcagatcgaggtagccaagcagatcagtctcggctcctgcccgctccagagctcccccgccgaggtcgtcgccttccgctactgggtactctcaccatttgttcgtgcttcacagagtttcagtgcccttagctacgacgacaaaatcttggatggtttctatgacatttttgtcattggggacgagcccacattgccaaccataccctccttgacggaactgcatcaacagccattttcacatgcatccaaaacagaagccgtattggtcaacagagcacaagacaccaaacttgtacaacttgagcagaaggcactcatcatggctgtggaagttcgctcgaaaactccagagtttgttgggcacaacctggtccagagactagctactttagtttccgactacatgggtggaccagtcatcgatccagaaagctttttgtccaagtaccagaatgtgagcagctctctgagagctagtataagaagtgctgttatgcctctcggtgagttaacaattggtctggctcgtcaccgtgcactgctttttaaggttttggccgacagcctcgctgttccttgtcgactagttaaaggaagacagtacactggatcggatgatggagctttgagcattgtgaaatttaatgatggaagggagtacattgttgatctcatgtcagatccaggtactcttataccttcagacggtgcgggcttgggtagagaatttgaagatagtttatttgcagatagtcaccatgttaacaaagatgactgtaacactcagttggagtcttcctttagtgaagtctcaagttctatgtatggttcttttgagaatgagtcacttgaaaaagtatccacacccagcaattttgggcattctgatccttatggcataacaactggccagactggcagccagggatcagcggtatctggttcatttggggaactatcaattagcacaagcataagtgaaaatttgcctgttattcatgaatctagaaatacagaccataccatgagtacacagagcaaagataagtcctctgcagcgaataattcgtcatcaagttctccttcatcttctgaggtgggtggtgctccagcagtacgaaggatgaaagtgaaagatgtctcagaatatatgattagtgctgcaaaagaaaacccccagatagctgagaggatccatgctgtcttacttgaaaatggagttgtcccaccacctgatttgttttcagaagaatcaagggaacaacctaaagaccttattgtgtatgacacatctctgtttcaaactaaagatgaaatgataaagaggatgaatgagcttgaatctacaacaaacgctgatttttgtcatggtccttcggtgccacatccccctggacatgaactccaaacaaaggctgttccttatcggattcctctggatcttaaacctatccaggggctgggtacctaccatccctcagattcccggaacagtactggtagttcacatacgtatgaaccatctgcacctccccaggaggatccactacaacttataaaacaaatgcctgttgcagcagctgctgttgcaaccgctgcagtggttgcatcctcaatggttgtcgctgcagctaaatctaacagtgatatcaaactcgacgtgcctgttgctgctgcggcgactgctgctgcagttgtggctacaactgctgctgttaacaagcagtacgaatacttggaacctggttgtcaattgcttagtttgccaagttcttcaggggcaaatgaattgatcccgaagggtagacatgacttctgggataatcagtttgaaattgatcatggacaaactagtgttcccgagaaagaaaaagatttggttgaagtacctcaggaagctgaaagagtctctgacaagtcggttgggactgaaagctcaagatctgatattgccctagatggtgttgcagagtttgaaatccaatgggaagagatcactctgggagaacgtgttgggctaggatcctttggagaggtgtacaaaggggaatggcatggaacagaagtcgcagtgaagaaattcttgcagcaagatatatcaagcgatgctctggatgaatttagaactgagttccaaataatgaaaagattgcgtcatccaaatgttgttctatttatgggtgctgttactcgtgtacctaatctttctatcgtgaccgagtttcttccaagaggtagtttgtttcgattgattcatcgacccaacaaccagttggatgaaagaagacgtctaagaatggcacttgatgtggctcgtggtatgaattatttgcacaattgctcccctgttgtagtgcaccgagatttgaaatctccaaaccttcttgttgacaagaattgggttgtgaaggtttgtgattttggtttatcacgtatgaagaatagtaccttcctttcctcgagatccacggctggcacagcagagtggatggcaccagaagtacttcgaaacgaaccatctgatgagaaatgtgatgttttcagctacggggttatattatgggaacttttcacactacttcagccatgggaaggtatgaaccccatgcaagttgttggagctgttggttttcagcaacgtcgccttgatattccagctcatgtggatcccaccatagcagagataataaggagatgctggcaaacagacccaaagatgcgtccatcattttcagagatcatgtcttccttaaaaccattattgaaaaacacgcctgccaatcaaccccaaaggcagcgagtgcaacgagcagatggctaa
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| Protein seq | MKNFLRKLHIGDSAGDGASSLAPPPPVSKKGGGGGGGGGGGGAQHEHKHGSGISSWLSSVTGRPQTQPSPSPSPSRPFAADAVVEAEAAALASSVEVRRLEVEEEEEKARRESREESVRKREMEKEKQEAELEEYHMQLALEMSAREDPEATQIEVAKQISLGSCPLQSSPAEVVAFRYWVLSPFVRASQSFSALSYDDKILDGFYDIFVIGDEPTLPTIPSLTELHQQPFSHASKTEAVLVNRAQDTKLVQLEQKALIMAVEVRSKTPEFVGHNLVQRLATLVSDYMGGPVIDPESFLSKYQNVSSSLRASIRSAVMPLGELTIGLARHRALLFKVLADSLAVPCRLVKGRQYTGSDDGALSIVKFNDGREYIVDLMSDPGTLIPSDGAGLGREFEDSLFADSHHVNKDDCNTQLESSFSEVSSSMYGSFENESLEKVSTPSNFGHSDPYGITTGQTGSQGSAVSGSFGELSISTSISENLPVIHESRNTDHTMSTQSKDKSSAANNSSSSSPSSSEVGGAPAVRRMKVKDVSEYMISAAKENPQIAERIHAVLLENGVVPPPDLFSEESREQPKDLIVYDTSLFQTKDEMIKRMNELESTTNADFCHGPSVPHPPGHELQTKAVPYRIPLDLKPIQGLGTYHPSDSRNSTGSSHTYEPSAPPQEDPLQLIKQMPVAAAAVATAAVVASSMVVAAAKSNSDIKLDVPVAAAATAAAVVATTAAVNKQYEYLEPGCQLLSLPSSSGANELIPKGRHDFWDNQFEIDHGQTSVPEKEKDLVEVPQEAERVSDKSVGTESSRSDIALDGVAEFEIQWEEITLGERVGLGSFGEVYKGEWHGTEVAVKKFLQQDISSDALDEFRTEFQIMKRLRHPNVVLFMGAVTRVPNLSIVTEFLPRGSLFRLIHRPNNQLDERRRLRMALDVARGMNYLHNCSPVVVHRDLKSPNLLVDKNWVVKVCDFGLSRMKNSTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVFSYGVILWELFTLLQPWEGMNPMQVVGAVGFQQRRLDIPAHVDPTIAEIIRRCWQTDPKMRPSFSEIMSSLKPLLKNTPANQPQRQRVQRADG
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_06g0008920 | OsLiXu_06g0008920.02 | Chr06 | 6812660 | 6817795 | - | IsoSeq | ||
| CDS seq | atgatggaagggagtacattgttgatctcatgtcagatccaggtactcttataccttcagacggtgcgggcttgggtagagaatttgaagatagtttatttgcagatagtcaccatgttaacaaagatgactgtaacactcagttggagtcttcctttagtgaagtctcaagttctatgtatggttcttttgagaatgagtcacttgaaaaagtatccacacccagcaattttgggcattctgatccttatg
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| Protein seq | MMEGSTLLISCQIQVLLYLQTVRAWVENLKIVYLQIVTMLTKMTVTLSWSLPLVKSQVLCMVLLRMSHLKKYPHPAILGILILM |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.600691 | 2.794132 | 1.042502 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0232100 | RBH | 3.457225 | 2.154220 | 4.883350 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g12590 | RBH | 0.917231 | 0.740163 | 0.949028 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0232100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0008940 | RBH | 0.858008 | 21.940079 | 3.523680 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0008810 | RBH | 0.255748 | 5.319863 | 1.607584 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0008820 | RBH | 1.497856 | 14.828387 | 5.743906 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0008920 | RBH | 0.194206 | 0.806390 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0008920 | RBH | 6.083967 | 43.337395 | 10.507010 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0113600 | RBH | 7.050156 | 33.5726455 | 9.7458385 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0008520 | RBH | 0.435330 | 1.598071 | 1.528633 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0114700 | RBH | 8.8207835 | 38.933245 | 17.4071215 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0009000 | RBH | 0.322675 | 0.475656 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0008810 | RBH | 0.400911 | 43.133835 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0008860 | RBH | 17.012720 | 82.251556 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0033090 | RBH | 1.608681 | 3.721440 | 2.690652 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0008750 | RBH | 0.417228 | 13.250827 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G008640 | RBH | 0.545347 | 9.164758 | 1.777452 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0008940 | RBH | 1.484686 | 53.094437 | 6.318329 |
