Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_05g0020720 | OGI:05063770 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr05:24383604-24385292 | ||||||||
| Gene Symbol | OsOFP15, OsOFP22 | ||||||||||
| DNA seq | tctgcaaaaaaccatgcgagccccatgttgtccagcgaaccaggtgtgctgaccggacggtatggcccaccgttcagcgagacgagaaaggaacaaaaagagcagcgaaacctcgctccgcacgctctctcccgccgctacttatcccgcgcgggtcacggcgtggtcgcgctctggcctggccccccattcgatctctccctgctcctccactcctcctcctcgtacagcgccgaagaacggaggcggcgccgccgccgcgccggcgagaggagagcgagggaggacatgggccggcggaagttcaggctctccgacatgatgcccaacgcgtggttctacaagctccgcgacatgcgcgcgcggggcggccgcggtgcaactgcgatgcagccgccgtcgtcgtcgtcgttgatgagggggagcagggcggcgcagcagcaggcgggcacgtcgaggctggggacgtcgtcgtcgtcgtcgtcgtcgttgctgccgcacagggcgtcgtactactacaccacccgggacagggaggtcccgccgccgccgccgccaccgccgaggggcgtggatgatcaattcccttccctcacgctgtcgccgccgttgccgacgaggaacagcaggaggcggcacagggttgggagatttggttcgacggagatggatggcggcgagctcgtactagcgccgtccgacgaccacgacggctgcagccaccaggagccgccagtggccgatgcgtccgggagctcccggtgccgtcgcgacatgttcatcgggagagatggcggccggggcgtggagttccggcgccgggcgacgacggtggatggtcctgaggaggacgccgccgtcgatgtcaaggtgatcacgtcggacgcggacataatcatcgacctcggcgctgacgactacgacgacgacgacacaccggagagggtgctccggcctgtcgtgaccaggcccgcgaggagggagctcgactggtgcgagccggcggaggtgaagcacgtcgacctcgccgagctgatgacaccgagagcgagctctgcctctgcctcctcggagaagagcatcagcacgggcaagccgaggcgttcgtccgtgtcgtctcgacgccgcctcaagacgcgcaccaacagcccgcgcctcgccgcgtgcaggaaaggcaagccgacggcgcgggcaacgacgacgacgccgacgcagccgccgctcgcgcacagcttcgcggtggtgaagacgtcgtcggacccgaggagggacttcctcgagtccatggaggagatgatcgccgagaacggcatccgcgacgccggcgacctggaggacctcctcgcctgctacctctccctcaactccggcgagtaccatgacctcatcgtcgaggtgttcgagcaggtctggaccggcctcgccgctgcctgtggcgtcatgccatgagaaaacgccaagagttcatcgctcaccaaagcctccatgctcattgattgctgcttggtgaatcgctgaatcttgccatgaattattatagtagagtagtttagttctttgatttctagtagatgatggttaattagcagagtttagttctttgatttctagtagacgatggttaattagcagcaagaaattagccataaagcaatagaaataaaatcgatcgaaaagtttggttctttt
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| CDS seq | atgttgtccagcgaaccaggtgtgctgaccggacggtatggcccaccgttcagcgagacgagaaaggaacaaaaagagcagcgaaacctcgctccgcacgctctctcccgccgctacttatcccgcgcgggtcacggcgtggtcgcgctctggcctggccccccattcgatctctccctgctcctccactcctcctcctcgtacagcgccgaagaacggaggcggcgccgccgccgcgccggcgagaggagagcgagggaggacatgggccggcggaagttcaggctctccgacatgatgcccaacgcgtggttctacaagctccgcgacatgcgcgcgcggggcggccgcggtgcaactgcgatgcagccgccgtcgtcgtcgtcgttgatgagggggagcagggcggcgcagcagcaggcgggcacgtcgaggctggggacgtcgtcgtcgtcgtcgtcgtcgttgctgccgcacagggcgtcgtactactacaccacccgggacagggaggtcccgccgccgccgccgccaccgccgaggggcgtggatgatcaattcccttccctcacgctgtcgccgccgttgccgacgaggaacagcaggaggcggcacagggttgggagatttggttcgacggagatggatggcggcgagctcgtactagcgccgtccgacgaccacgacggctgcagccaccaggagccgccagtggccgatgcgtccgggagctcccggtgccgtcgcgacatgttcatcgggagagatggcggccggggcgtggagttccggcgccgggcgacgacggtggatggtcctgaggaggacgccgccgtcgatgtcaaggtgatcacgtcggacgcggacataatcatcgacctcggcgctgacgactacgacgacgacgacacaccggagagggtgctccggcctgtcgtgaccaggcccgcgaggagggagctcgactggtgcgagccggcggaggtgaagcacgtcgacctcgccgagctgatgacaccgagagcgagctctgcctctgcctcctcggagaagagcatcagcacgggcaagccgaggcgttcgtccgtgtcgtctcgacgccgcctcaagacgcgcaccaacagcccgcgcctcgccgcgtgcaggaaaggcaagccgacggcgcgggcaacgacgacgacgccgacgcagccgccgctcgcgcacagcttcgcggtggtgaagacgtcgtcggacccgaggagggacttcctcgagtccatggaggagatgatcgccgagaacggcatccgcgacgccggcgacctggaggacctcctcgcctgctacctctccctcaactccggcgagtaccatgacctcatcgtcgaggtgttcgagcaggtctggaccggcctcgccgctgcctgtggcgtcatgccatga
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| Protein seq | MLSSEPGVLTGRYGPPFSETRKEQKEQRNLAPHALSRRYLSRAGHGVVALWPGPPFDLSLLLHSSSSYSAEERRRRRRRAGERRAREDMGRRKFRLSDMMPNAWFYKLRDMRARGGRGATAMQPPSSSSLMRGSRAAQQQAGTSRLGTSSSSSSSLLPHRASYYYTTRDREVPPPPPPPPRGVDDQFPSLTLSPPLPTRNSRRRHRVGRFGSTEMDGGELVLAPSDDHDGCSHQEPPVADASGSSRCRRDMFIGRDGGRGVEFRRRATTVDGPEEDAAVDVKVITSDADIIIDLGADDYDDDDTPERVLRPVVTRPARRELDWCEPAEVKHVDLAELMTPRASSASASSEKSISTGKPRRSSVSSRRRLKTRTNSPRLAACRKGKPTARATTTTPTQPPLAHSFAVVKTSSDPRRDFLESMEEMIAENGIRDAGDLEDLLACYLSLNSGEYHDLIVEVFEQVWTGLAAACGVMP |
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| Function | Transcription repressor OFP4 [UniProtKB/Swiss-Prot:F4HNU8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_05g0020720 | OsLiXu_05g0020720.01 | Chr05 | 24383604 | 24385292 | + | NAM | ||
| CDS seq | atgttgtccagcgaaccaggtgtgctgaccggacggtatggcccaccgttcagcgagacgagaaaggaacaaaaagagcagcgaaacctcgctccgcacgctctctcccgccgctacttatcccgcgcgggtcacggcgtggtcgcgctctggcctggccccccattcgatctctccctgctcctccactcctcctcctcgtacagcgccgaagaacggaggcggcgccgccgccgcgccggcgagaggagagcgagggaggacatgggccggcggaagttcaggctctccgacatgatgcccaacgcgtggttctacaagctccgcgacatgcgcgcgcggggcggccgcggtgcaactgcgatgcagccgccgtcgtcgtcgtcgttgatgagggggagcagggcggcgcagcagcaggcgggcacgtcgaggctggggacgtcgtcgtcgtcgtcgtcgtcgttgctgccgcacagggcgtcgtactactacaccacccgggacagggaggtcccgccgccgccgccgccaccgccgaggggcgtggatgatcaattcccttccctcacgctgtcgccgccgttgccgacgaggaacagcaggaggcggcacagggttgggagatttggttcgacggagatggatggcggcgagctcgtactagcgccgtccgacgaccacgacggctgcagccaccaggagccgccagtggccgatgcgtccgggagctcccggtgccgtcgcgacatgttcatcgggagagatggcggccggggcgtggagttccggcgccgggcgacgacggtggatggtcctgaggaggacgccgccgtcgatgtcaaggtgatcacgtcggacgcggacataatcatcgacctcggcgctgacgactacgacgacgacgacacaccggagagggtgctccggcctgtcgtgaccaggcccgcgaggagggagctcgactggtgcgagccggcggaggtgaagcacgtcgacctcgccgagctgatgacaccgagagcgagctctgcctctgcctcctcggagaagagcatcagcacgggcaagccgaggcgttcgtccgtgtcgtctcgacgccgcctcaagacgcgcaccaacagcccgcgcctcgccgcgtgcaggaaaggcaagccgacggcgcgggcaacgacgacgacgccgacgcagccgccgctcgcgcacagcttcgcggtggtgaagacgtcgtcggacccgaggagggacttcctcgagtccatggaggagatgatcgccgagaacggcatccgcgacgccggcgacctggaggacctcctcgcctgctacctctccctcaactccggcgagtaccatgacctcatcgtcgaggtgttcgagcaggtctggaccggcctcgccgctgcctgtggcgtcatgccatga
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| Protein seq | MLSSEPGVLTGRYGPPFSETRKEQKEQRNLAPHALSRRYLSRAGHGVVALWPGPPFDLSLLLHSSSSYSAEERRRRRRRAGERRAREDMGRRKFRLSDMMPNAWFYKLRDMRARGGRGATAMQPPSSSSLMRGSRAAQQQAGTSRLGTSSSSSSSLLPHRASYYYTTRDREVPPPPPPPPRGVDDQFPSLTLSPPLPTRNSRRRHRVGRFGSTEMDGGELVLAPSDDHDGCSHQEPPVADASGSSRCRRDMFIGRDGGRGVEFRRRATTVDGPEEDAAVDVKVITSDADIIIDLGADDYDDDDTPERVLRPVVTRPARRELDWCEPAEVKHVDLAELMTPRASSASASSEKSISTGKPRRSSVSSRRRLKTRTNSPRLAACRKGKPTARATTTTPTQPPLAHSFAVVKTSSDPRRDFLESMEEMIAENGIRDAGDLEDLLACYLSLNSGEYHDLIVEVFEQVWTGLAAACGVMP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0477200 | RBH | 0.0 | 0.0 | 1.123760 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g39950 | RBH | 0.0 | 0.0 | 0.172012 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0477200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0020810 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0020760 | RBH | 0.0 | 0.0 | 0.180792 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0020640 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0020640 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0020740 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0363200 | RBH | 0.170016 | 0 | 0.1568795 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0020350 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0372600 | RBH | 0.083561 | 0 | 0.453625 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0020590 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0020570 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0020650 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0037720 | RBH | 0.325687 | 0.280586 | 0.135737 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0020720 | RBH | 0.0 | 0.818281 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G020180 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0020630 | RBH | 0.0 | 0.0 | 0.0 |
