Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_05g0011590 | OGI:05038080 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr05:14970096-14974576 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gaggattaccactagttagctttgtaactaggagcctaagccagggaggagcaatggcgagctcgagcttgtcgcgccgtgccctcctcctcttcttcttggaggtagccgtcgccatggcgctgcttcttccgggcggtcacgcgcgagtgtgcccgccgtgcggctcgacggaggtgccgtacccgctgagcacggcggacgggtgcggcgacccggagtacaaggtccggtgcgcggcggcggcggcggggggcacggcgcccacgctcctgttcgacgcgctcaacggcacgtcgtacccgatcacctccatctccccggcgtcgcagcgcctggtggtgtcgccggcgccgttcgtgtcgccgggcgcgtgcgtgtcggtgggcgcggcggcgtcccgcggcgtgcagctggacccgtcgcggccgttcaacgtcagctcgtccaacaccgtcatgctgctcaactgcacggagctgctgctgcggtcgccgctcaactgctcctccaactcgctctgccacgcctacgcgggcgccgcggggtcgacggcgtcggcgtgcgcgccgctgccgctgtgctgcacgttcgtggcggggggctcgtcgacgtcgtaccgcatccggctgggcccgcagtcgtgcagcgcgtaccggagcttcgtggggctcgacccgtcgcagccgccggcgacgtggggcagccgcctcgggctggagctgcagtgggcgacgccgagggagccgctgtgccgcacgcaggccgactgcgaggacggcgccgccgccacctgcgccgacgacccgtcggcaaccggaggcgcgggcacggtccggcgctgcctgtgcgtgtccgggctcgtctggaatcccatcgctggcgcgtgccagcagcagagtacgtttaatttttttgcttcgacggctgacagctcggctgtgaggcgcctctaaTttttttttttatggctgttaattttgatgcagatctcacggatagcggatccaaccatgcgcctctcattgctggtaattatattgcttccttccttcagcgctagctagcgtcttaatttcttattactgtcatcctgggaaattaattaggacctctgttctcgatcgggatgcatgcttgacgcctactatctagttacgacttcaatttgcaaggcgggcgactagccgcttgcttggttttaacggagagagatcgaattgtggagtcgttattcgttgctttggtgaaaactcagtgattaagtaggccgctaatacccttttgttagttgttactgcgagtagttactcgctccgtgcacaaatatgaaaatttctcttagcatggagtaaaattaagaaggaaagaatgaggtatggataggggtagaagtgtggtcgttggggataagacgaaaataaatttaaacgagagataaatgattgatgggacacatattattttaaaatctttacatttgtgaataaattttaattgattggaatgtttataatactgaattttttAaaaaatatttggaatgcttatatttgtagatagagggggtcgtagtattatagttatctgattatgaataagaaataatccaagcatcgaatacatatcaggagcatggtcaaggcacttagtcatttttattcggtatacaataagtaatccgggctgataaaataaaattgaggtcaatgatctggattgaatataaatgagagatcaactgaaagtaggtttacatcagtatcatgctgggtcccatactcccttgcgccaatggtcaacttgcggcggcttacatccggagaaaagcattgaccataccagagcaagtgtaaatctacctaactccatccagagagctagcattgtcagctttacaacacggacgaaccaaggaagttcaacggttggaaatttggaatgagttgctgcacgatttagctcgctttggagtttgtacgaattctccacgcgaaacaatttaactccttcgtggagcccaaccattaaatggatgtaccaagatttttctttgaaaacaatacttaataaataattcatggaggccacatcttggatagtttatatatgaaaattgtctatcctgtctcatggtgccacatcaacttaattaattttttctagatttgggataatcgattgatcaaaggtccaaaacatataaaatatatatcaaatcaaaccatgttgctaatcgctacaatgaaaatcaacacaccacacaactcattttaaccattgtgaattcggtagatgtaaccttctatcccacggtaacagcagcaacacacatgtaattttcatctagctagttaaatatagggtgaatagctaatttagtcccttaagtttcaccgaagatttaatttggtccttcacgttttattttgtccatatagttcctccaaatatttgttttggtttgaaatcatccttgggtccacttaatatgccatatggctatttccagtcaatattcctattagaaaatatcttttttgcccttaattcgtatacaactatatactagaaaagagaaagccaatataaataaacaacattacatatgtacttcccattatttcaatatgtgcacatgaaacttaagcaattgctatcgtatacacttgctagtacataatttatttttattttacataatatactatgtattatctataaaaaattcaagcatgtaatttttctctTAtatatatatatatgtatatgtatatatatatatatatatgtatatgTAtatatatatatatatgtatatgtatatgtatatatatatatatgtatatGtatatatatgtgtatatgtatatatatatatatgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgatgaggtgtataagtgttatttatgaagagagttgttggttcaagataagtttgaactaaaaggaaaacttaaaggactcatatatatatagatagattgaaatagaactaaactaagcctctgatgaaacttggaggaccattttgactattcacccttaaatatagatatttgatgtttgttgttccttaaacataagctaaggaattgaagcataaggaattgattaaccagttagtactattggtcgaccgttaattaataagcacatcaaggcagcaagcgtggaatttactaactagtgaattaagaagataatggatggtttaatcttgctataaatacatgaatgcaatgcagggatcgtgtgcggcctaggcggcgcgctgctggtggcgactgcaggactgttcgcttatcggcggcagcagcgcattcggctggccaaggagaagctggccaaggagcgcgaggagatcctcaacgcgaacaactcgagcggccgcaccgccaagaacttctccgggcgagagctgaggcgcgccaccgccaacttctcccgcgacaacctgctcggcgccggcggctacggcgaggtgtacaggggcgtcctcgcggacggcaccgtggtggccgtcaagtgcgccaagctcggcaacaccaagtccacggagcaggtcctgaacgaggtgcgcgtgctgtcgcaggtgaaccaccgcagtctcgtccgcctgctcggctgctgcgtcgacctggagcagcctctgatggtgtacgagttcatccccaacggcacgctggccgaccacctgtacggccccctcagccaccccccgctcccgtggcggcggcggctggccatcgcgcaccacacggcgcagggcatcgcgtacctgcacttctccgctgttccgcccatctaccaccgggacatcaagtcgagcaacatactcctcgacgagcggatggatggcaaggtatccgactttgggctgtcccggctggcggagcaggggttgagccacgtctcgacgtgcgcgcaggggacgctgggttacctcgacccggagtactaccggaactaccagctcaccgacaagagcgacgtgtatagcttcggtgtcgtgctgttggagcttctgacgtgcaagcgcgccattgactttggccgtggcgccgacgatgtcaacttggccgtgcacgtgcaacgggcagcagaggaggagcgccttatggatgtcgtggacccggtgttgaaggataacgccacacagctgcaatgcgacaccatcaaggctctcgggtttcttgcgttaggatgcctcgaggaacgccgccaaaaccggccatccatgaaggaggttgcagaggagatcgaatacattatgaatatcgaggccggcaacgctcatctcaaggagctgcacagcttatgatcagtggtcaattatattagttagtcaaacaacccatataatgcacgggttattatagtttttctttccgagttttctgtttttctagtgtctc
More
|
||||||||||
| CDS seq | atggcgagctcgagcttgtcgcgccgtgccctcctcctcttcttcttggaggtagccgtcgccatggcgctgcttcttccgggcggtcacgcgcgagtgtgcccgccgtgcggctcgacggaggtgccgtacccgctgagcacggcggacgggtgcggcgacccggagtacaaggtccggtgcgcggcggcggcggcggggggcacggcgcccacgctcctgttcgacgcgctcaacggcacgtcgtacccgatcacctccatctccccggcgtcgcagcgcctggtggtgtcgccggcgccgttcgtgtcgccgggcgcgtgcgtgtcggtgggcgcggcggcgtcccgcggcgtgcagctggacccgtcgcggccgttcaacgtcagctcgtccaacaccgtcatgctgctcaactgcacggagctgctgctgcggtcgccgctcaactgctcctccaactcgctctgccacgcctacgcgggcgccgcggggtcgacggcgtcggcgtgcgcgccgctgccgctgtgctgcacgttcgtggcggggggctcgtcgacgtcgtaccgcatccggctgggcccgcagtcgtgcagcgcgtaccggagcttcgtggggctcgacccgtcgcagccgccggcgacgtggggcagccgcctcgggctggagctgcagtgggcgacgccgagggagccgctgtgccgcacgcaggccgactgcgaggacggcgccgccgccacctgcgccgacgacccgtcggcaaccggaggcgcgggcacggtccggcgctgcctgtgcgtgtccgggctcgtctggaatcccatcgctggcgcgtgccagcagcagaatctcacggatagcggatccaaccatgcgcctctcattgctgggatcgtgtgcggcctaggcggcgcgctgctggtggcgactgcaggactgttcgcttatcggcggcagcagcgcattcggctggccaaggagaagctggccaaggagcgcgaggagatcctcaacgcgaacaactcgagcggccgcaccgccaagaacttctccgggcgagagctgaggcgcgccaccgccaacttctcccgcgacaacctgctcggcgccggcggctacggcgaggtgtacaggggcgtcctcgcggacggcaccgtggtggccgtcaagtgcgccaagctcggcaacaccaagtccacggagcaggtcctgaacgaggtgcgcgtgctgtcgcaggtgaaccaccgcagtctcgtccgcctgctcggctgctgcgtcgacctggagcagcctctgatggtgtacgagttcatccccaacggcacgctggccgaccacctgtacggccccctcagccaccccccgctcccgtggcggcggcggctggccatcgcgcaccacacggcgcagggcatcgcgtacctgcacttctccgctgttccgcccatctaccaccgggacatcaagtcgagcaacatactcctcgacgagcggatggatggcaaggtatccgactttgggctgtcccggctggcggagcaggggttgagccacgtctcgacgtgcgcgcaggggacgctgggttacctcgacccggagtactaccggaactaccagctcaccgacaagagcgacgtgtatagcttcggtgtcgtgctgttggagcttctgacgtgcaagcgcgccattgactttggccgtggcgccgacgatgtcaacttggccgtgcacgtgcaacgggcagcagaggaggagcgccttatggatgtcgtggacccggtgttgaaggataacgccacacagctgcaatgcgacaccatcaaggctctcgggtttcttgcgttaggatgcctcgaggaacgccgccaaaaccggccatccatgaaggaggttgcagaggagatcgaatacattatgaatatcgaggccggcaacgctcatctcaaggagctgcacagcttatga
More
|
||||||||||
| Protein seq | MASSSLSRRALLLFFLEVAVAMALLLPGGHARVCPPCGSTEVPYPLSTADGCGDPEYKVRCAAAAAGGTAPTLLFDALNGTSYPITSISPASQRLVVSPAPFVSPGACVSVGAAASRGVQLDPSRPFNVSSSNTVMLLNCTELLLRSPLNCSSNSLCHAYAGAAGSTASACAPLPLCCTFVAGGSSTSYRIRLGPQSCSAYRSFVGLDPSQPPATWGSRLGLELQWATPREPLCRTQADCEDGAAATCADDPSATGGAGTVRRCLCVSGLVWNPIAGACQQQNLTDSGSNHAPLIAGIVCGLGGALLVATAGLFAYRRQQRIRLAKEKLAKEREEILNANNSSGRTAKNFSGRELRRATANFSRDNLLGAGGYGEVYRGVLADGTVVAVKCAKLGNTKSTEQVLNEVRVLSQVNHRSLVRLLGCCVDLEQPLMVYEFIPNGTLADHLYGPLSHPPLPWRRRLAIAHHTAQGIAYLHFSAVPPIYHRDIKSSNILLDERMDGKVSDFGLSRLAEQGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTCKRAIDFGRGADDVNLAVHVQRAAEEERLMDVVDPVLKDNATQLQCDTIKALGFLALGCLEERRQNRPSMKEVAEEIEYIMNIEAGNAHLKELHSL |
||||||||||
| Function | Wall-associated receptor kinase-like 20 [UniProtKB/Swiss-Prot:Q9LZM4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_05g0011590 | OsLiXu_05g0011590.01 | Chr05 | 14970096 | 14974576 | + | NAM | ||
| CDS seq | atggcgagctcgagcttgtcgcgccgtgccctcctcctcttcttcttggaggtagccgtcgccatggcgctgcttcttccgggcggtcacgcgcgagtgtgcccgccgtgcggctcgacggaggtgccgtacccgctgagcacggcggacgggtgcggcgacccggagtacaaggtccggtgcgcggcggcggcggcggggggcacggcgcccacgctcctgttcgacgcgctcaacggcacgtcgtacccgatcacctccatctccccggcgtcgcagcgcctggtggtgtcgccggcgccgttcgtgtcgccgggcgcgtgcgtgtcggtgggcgcggcggcgtcccgcggcgtgcagctggacccgtcgcggccgttcaacgtcagctcgtccaacaccgtcatgctgctcaactgcacggagctgctgctgcggtcgccgctcaactgctcctccaactcgctctgccacgcctacgcgggcgccgcggggtcgacggcgtcggcgtgcgcgccgctgccgctgtgctgcacgttcgtggcggggggctcgtcgacgtcgtaccgcatccggctgggcccgcagtcgtgcagcgcgtaccggagcttcgtggggctcgacccgtcgcagccgccggcgacgtggggcagccgcctcgggctggagctgcagtgggcgacgccgagggagccgctgtgccgcacgcaggccgactgcgaggacggcgccgccgccacctgcgccgacgacccgtcggcaaccggaggcgcgggcacggtccggcgctgcctgtgcgtgtccgggctcgtctggaatcccatcgctggcgcgtgccagcagcagaatctcacggatagcggatccaaccatgcgcctctcattgctgggatcgtgtgcggcctaggcggcgcgctgctggtggcgactgcaggactgttcgcttatcggcggcagcagcgcattcggctggccaaggagaagctggccaaggagcgcgaggagatcctcaacgcgaacaactcgagcggccgcaccgccaagaacttctccgggcgagagctgaggcgcgccaccgccaacttctcccgcgacaacctgctcggcgccggcggctacggcgaggtgtacaggggcgtcctcgcggacggcaccgtggtggccgtcaagtgcgccaagctcggcaacaccaagtccacggagcaggtcctgaacgaggtgcgcgtgctgtcgcaggtgaaccaccgcagtctcgtccgcctgctcggctgctgcgtcgacctggagcagcctctgatggtgtacgagttcatccccaacggcacgctggccgaccacctgtacggccccctcagccaccccccgctcccgtggcggcggcggctggccatcgcgcaccacacggcgcagggcatcgcgtacctgcacttctccgctgttccgcccatctaccaccgggacatcaagtcgagcaacatactcctcgacgagcggatggatggcaaggtatccgactttgggctgtcccggctggcggagcaggggttgagccacgtctcgacgtgcgcgcaggggacgctgggttacctcgacccggagtactaccggaactaccagctcaccgacaagagcgacgtgtatagcttcggtgtcgtgctgttggagcttctgacgtgcaagcgcgccattgactttggccgtggcgccgacgatgtcaacttggccgtgcacgtgcaacgggcagcagaggaggagcgccttatggatgtcgtggacccggtgttgaaggataacgccacacagctgcaatgcgacaccatcaaggctctcgggtttcttgcgttaggatgcctcgaggaacgccgccaaaaccggccatccatgaaggaggttgcagaggagatcgaatacattatgaatatcgaggccggcaacgctcatctcaaggagctgcacagcttatga
More
|
|||||||
| Protein seq | MASSSLSRRALLLFFLEVAVAMALLLPGGHARVCPPCGSTEVPYPLSTADGCGDPEYKVRCAAAAAGGTAPTLLFDALNGTSYPITSISPASQRLVVSPAPFVSPGACVSVGAAASRGVQLDPSRPFNVSSSNTVMLLNCTELLLRSPLNCSSNSLCHAYAGAAGSTASACAPLPLCCTFVAGGSSTSYRIRLGPQSCSAYRSFVGLDPSQPPATWGSRLGLELQWATPREPLCRTQADCEDGAAATCADDPSATGGAGTVRRCLCVSGLVWNPIAGACQQQNLTDSGSNHAPLIAGIVCGLGGALLVATAGLFAYRRQQRIRLAKEKLAKEREEILNANNSSGRTAKNFSGRELRRATANFSRDNLLGAGGYGEVYRGVLADGTVVAVKCAKLGNTKSTEQVLNEVRVLSQVNHRSLVRLLGCCVDLEQPLMVYEFIPNGTLADHLYGPLSHPPLPWRRRLAIAHHTAQGIAYLHFSAVPPIYHRDIKSSNILLDERMDGKVSDFGLSRLAEQGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTCKRAIDFGRGADDVNLAVHVQRAAEEERLMDVVDPVLKDNATQLQCDTIKALGFLALGCLEERRQNRPSMKEVAEEIEYIMNIEAGNAHLKELHSL
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.438204 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0318100 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g25390 | RBH | 0.0 | 0.0 | 0.131479 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0318100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0011570 | RBH | 0.0 | 2.836402 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0011590 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0011530 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0011600 | RBH | 0.0 | 0.027929 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0011590 | RBH | 0.495659 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0217400 | RBH | 0.6044245 | 16.6708165 | 0.1955695 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0011340 | RBH | 0.068719 | 0.566827 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0227100 | RBH | 1.087299 | 41.1886845 | 0.651557 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0011520 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0011440 | RBH | 0.086364 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0011570 | RBH | 0.0 | 4.326158 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0011600 | RBH | 0.0 | 2.229414 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G011290 | RBH | 0.074234 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0011590 | RBH | 0.0 | 13.414757 | 1.203188 |
