Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_05g0009310 | OGI:05025490 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr05:9434072-9446537 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ccccacaatattttttccgccgctgccgcacactccacccactcagagagagagagagagagagagagatgcggcgtggcagcagcagcagcagcggtttcggtggccatctcctgtggctggtgcttgtattgtggtcatggcggatcgctgccgctcaagctcagcaagcaccaaaaactgatccaatcgaaggtaaccacggaataattactagtacttcatactactaccaatgcacgcatgcgtctttctttcgttttcctctctctatcatcattcatcaaccgcagcagtactagtagtacaatggtttggtagtggtacggtgtcttgacgtcttgtcgacggggttgacacgaacgaacagagataattatggccggtagaaattgtcgggttcaaatgccaatcttactgttcggctatctccatgaatcgaattccccccttctcagacagcatggaacaaaatttcttcctaccccaataatctaaaccgtacgaatctttctttctttctttctttcccaatcaaccaaagaagatagcaacaagcactagtagtaatccaggctgtaggaatctccggtggcgtgtagctttggtggctgtcgttgggttagaagcagtgcggccaaggtagaagaagaaagaagagccccaaatgctttacctgtggagagaagcagcggctcggtgctgagcggagatgtggaaggtagcgaatggcggggactgagccggcaaggagcggatatggacggggaaagcggcggcggcggcggcgaggtgtggatcgagtcgcggtgtgtgggtcctaattagcgaatattcgcgcgcggcgtaactcgcgggcatgttcacctgcctcgtcgtggtcggcacgagattttggtcgatttgtggagctgtgtcgcacgagccttgggatgcgtcatgtgctgaagccgttttttaaagaagttggcagcaggaaatacactttataggtcccttgttctactttataatcacttgttactgctacttgctattgctatgaacaatgattcTtttttttttttgcgggggctatgaacaatgattccactctcaagcatacacccttggtaccaaaaagaggtcaacttctatgggattcgtccctacaagttggtttttttctattttttttaggacagagtagtatgtgatatgcctacgaaactttcagcagtatttgtagtataaatgagaaatgttcttaggaagacaactttcttacaaagagtacattacttttttctccctaaaacaacttttaaactacttaatgaaacttttttcattaagagcaaaaaactttgtaatagagactacaaatttctactcgaaaaaacttactctttagcaataaaagattatattaggaaactttcacataaagactgaaaagcatccaactagttagcgatatttaactttgaaatcattttagagcatactttatttatttaagtataagataggaaaaataaaacacatgtgcatggtagacaattaggaacaagtttatattacacccctaactacgaaatcagtcattttacactcatcaactagcaaaatggatcaaaataccaccctaagagcagtacaaccagatattaatagtcactttcatgattttgacatcaaaataatatataattttttttacttacatttaactcttttttacatatcacaatacctagatgccataggagtaaaataaaattttattcgggcatcaaaataatgaaaatcattattaaaccagattgtattgtccataggcggtatttttggggtgtaaaatgtctaatttcatagtaaagggctgtctttttagacagacctaattgtagagaggtgtaatatggacttgtccaattgaaaacgaggttacagataaagattaatactccctccgtcttagatatgtcacatctgtactaggttgtacttatattgggatatagcgagtaccataatttccgtttacatctcaaattgaccaatacaattcctagtttgaccataaatggtaaggttacgctcaaacaatttttaaaattaatgatgttccacacttcgatattatgtcatatatatttttaagtatttaggaatttatttattcaaaaaagagatattaaagtttaaagatgtatagcaaaacaagcatatgtgcgtggcctgttgtaaaacacatcacctcaaacacagggatggcccagttaaagtagtgttggtacaagtgaaaaaaagaagagtagatagtaggcccattaatagtgcggtaaagagaaagagcaaatgattcatgtaaatggtgtgagaatttgtttgtgttgcatgaactataggtttttttgcaatcacatgcagacatacatcaccactcctgacgcacaacacatgtatacacccgcaagtgcgcccctttaactcaccatcatgatatggaagccaatgataaattcgtgaaagcctcattaaattccttaaccataggattttcagtttggtttaaccattactacaaaacaccccatagagaccaaccttataggtgctggtttacttaaaactgacacctataaagctttttcctttttttttttgtgtaaaattaagagccggtacctacaaacacttattggtaccagtttgtaacaaaaaccggcatcaatagtcctccaaagtcataggtgccggttctcataacaaaccgttacctagacaacacataggtgcccgttcttatcataaaccggcacctataactacggtatcataggtactggTttttattatgatccggaacatatgggcatcacatatgtactggttcttaataaaaaccggtacctatgagcccataggtgcctgcttacaattaaaactgcacctatgatgacacaactcatatatgtgtgtgttttatctaactttttcatataaagtcgtatgaagataagctttatatcaaatttgtagagctcgacgagatctacaactttgtagtttatgacttttttattgaaggatgtttggatgtccgaaaatgtgttacaaggtctcaaatctagttgcatgagtggatatttaaaatttctaaacgatatcgggtggagacaaaacctatataaaaattgtagatatggatgagatctacatttttgtaactgacaaacttttcatttgagcttatctatggtgttagatatggattataaatttggatgatagtggtctcaaaggaatagcatttatttccaagacaagaagtggttgtaggtgagatggtaatgtgactttgtgtgaagtgagtggtcttgagtttgaatcttccatgagacatgtatgtgattatgggttgaaaaaatcatgtgacttgtgggatgagagagttattgtataggtgcctaatAaaaatatcattttttttaatttttttagcacctgcaaaaataaaaaaacaggtgcacccctataggcctatagtgccacaaacttggttctaaattagactggttctaattggtgccggtaccggacctataagccctctaaaactggcacctatgagcttttaagtagtagtaaacgctgtatgggaaaataatcattttcctattttctggcaaaaaatcccataagctctcatctgactgtttggaattttgttggaatcaataattcaatttccatgagatcccaaatacctttctgccaggattttggttccaattctgcgaccccacgcccatatcattgatccaaatgcagcttaaagtgatttactagattgcatagttatgcattcatattatataaatactaataccagtttattggcccagtgtcagcactaaacacaataatggggagatggggcctgacggcaccatcggaatggaacatcagtggtgagccctgcagcggtgtagcctctgacaattccgactgggataactacccaaaagaccctgccatcaagtgtgactgctcttccaacgacaacaccatctgccatattatcaaactgtaagcttgccttcttgtcttggtttgatcagctgcacatacaaggtgttcgatgcaatatgcctgaaatagcccatgtcgtgctgaacctgcaagtattgttggttgcttgatttctaggtgtcatcaagttcaacaaatgtgcatctgctacttgcccctgcgtagattttacgatagcgtaaataactcaaccaggcaaaccggttaattggaaaaaaaaagggaacactggcttgtctggtttagtaccagccaaagcctgatctggccagcagccagctcacactctagacacaaatctatactacttcaaaagactctagtggtggtggtggtgagtatgtcaccaccaccaccaccattgacatatgggaccatggggtacactacaccaccatcaccattgacagatgaggtcataaggtacactgcatgaggtcattgtactaaccaacctctacaagaatagctggcctatgttttactttttaatatgaagaatcttgtttgaaccaagtagagataaatattcctttttcaaccatgagaactgctttttttttttctatttttgataatccgttgcaacgcacgggtatttggctagtatattaaatgacctattgagacttaaaccggcacactactaggaaaaaggtctgaaagggtcatcacaggctgtccctaacccatctatgagtttctataatggtggagtcattccagactaatctgtctgtgaaagtgtatattgttagaattatctaacagagaattaataaaagttccaacttgtgaatttcatattttctggaaactaattggaaataagaaaatctagagcccacatgtttttgtgagaggaaaagatcgtagtgagctgatagcattaatcggctggccattcaatatgactgtgaagcacgaagcaatttttatgcatgcatgcatgcgttcctgctgctgattcgttatttgctttcttgtctttgtgtggccagcacacaaatccctatgtgttactgtatgctgctccttctagacctttatttactgagaattactgctccttctagaccctatgttgacccgaattactgagaatgacgttgtatctccaggaactagatgcttcggatcctgcctctaggttgggtgcaattgtcatctaagatggccacttagtcatgcttaaccatggttatcaatattttcgtgtactgttgacttgtcagaaaattttgatccctctctttagacatgccacttgctattgagaattacattgtgtcatttgagaattatttatatgctattgagtgtattaatcttatcctctatttagagactcacctccttaataccattgatataaaagttcttcctttcgttttcagatctatttacacctgaggatagtactagattgagagccatagcttgacgtgcttgactttaccatgttaatttacattactgtttttgcaatcaggttactagaatatatttatatttagcagtaattcatgtgtctaccttttcatataatttattatagatcttatgtaaaggccttttaccaactcttgcatacaagctaaagcaaacaccattccattagagggacgcagaggcatttggttccccatccaatcaggaatttggtcttcacaattactggccaacgattttctcatttataattcaatatgaatgtctccgaggaaaagatgaaccacaccagtccatcccaaagttagtgcatgctgaatcacaacgggagtaatccatttttttggagataaaaaagagtaatccattgtccggccggggtcaactgaccttgttttgcatgttcttggggcaaaatcaaatggttgtttatataggggcaaaatcaaggtccaaaattggacttctattttcaaaagtggaaaaattggagttattccttttacttatcaatattacttgtgtgttttgcaggagagtaagaaagttaaacgttgttggtcgaatacctgcagagctacagaatctcacctttctacaagacctgtatggatctatgacttgtaatgttaatattgataatgaagtttgttaagctgtatgtcaatgttttgtagaatacatagttttaaccccatgaatataagaattctttttagggggctccatctaacatctttagaggtaagagctctaacaaaatactcatcactatactgatattgatggctttgccctaatgagaaaatgttctgtcctgccattaataaatcaggcaaaagtattatccttctaatgtaatcagtgatgttgtctagctacaaaaacgtggaatctttcactaactcaactgaagctcctgaattcaaagttcaaataaatataccaaatatatctaggatccaaagtaatcataacacaaagttttatactaaaacaaaacagaagaatgaaaactgatactcttattagactctgaatcattgattgatatcttgtgaaacagacaggaaatataattagatgccaaatatatttgaagttcagaatttcagttgtagcattttatttgttttcttacagaactgattgtatacattcaaatttgaaaacatatttcatttccttctatcataataatcgacattagaacacataaaggtccacttaccacctatgaggtaagagtaatatgaaccgtcgatgcaaaatacatggtttggaaagagttggtgtaccgtaaaaaatcctttgaataattaacttttgattgcaaggcaaaaaacagcaaatggtagttgcaagattttgtgtttgctaatggacttgatgttcccggtgttgtttcaggaacctgaatcagaattatttgactggtgccatcccatcattcattggaaaatttgcttccatgaaatatttgtaggagttacatgtcaagctatggattaatacaccatccattggtgggtgttatgttttaattatctttcatcatttgaaggggcttgggtttcaatccactgtctggacaacttccgaaggaacttgggaacctcaccaatctcctctcactgtaagagatcttttatttgagatcaatcagagcTAtatatatatatatattatggactaggtaaactaatataattatagggaaattgttaatcgcataacttattgacaataagctatAaaaaaaactcataagtcatatgtttggcatgtcagtattttcaagtaaatattgtactggtgaacagtggctcagatggcttatttggaaaactatgcccctcttctgttagcagttgaacccaaataattaatatcactcctgaaatatttcttcttgattcaggggcattagcctggacaactttactggtgaacttcctgaagaactgggcaacttgaccaaacttgagcagttgtaaatgcctcacttataacttccaatttctaagaactaaatttggaatggagagatctagtgttcaacttgataattactgcatgtttcaataacaggtacattgatagttctggattcagcggcccgtttccttcgacgatctccaagcttaagaacctgaagtacttgtaaagtcaataacagatcctcaactgttattttcattgtgttttcatatgctaaatgtcaaatattttggtctgtttgcaggaaagcgtcagataatgaattcacagggaaattaccggattacttggggagcttgactgaattggaagatctgtaagatttactatattaaattggtaaagcgttatacagtgtcttattttagagacggggaaattgtcaagcataaattttctgtatatgtcctttccatttgaactcgggcaatagcatttttcacctttcagttgtcactgaatagaaatgcagatatctgcataccattaaatttgtctacatggcatgttgatacatagagcttgcattctcttatactaatttggaccttgcaagtccctactttattttctgaaagtatgaacttgtagggctttccaaggaaattcttttgaagggccaattcctgcaagtttgtccaatctgaccaaactaacaaacttgtaagtacattgttttttgacatctttggacatttgatggcttagaaagttagaaggtcaagcttgataactgatttgtgaaatacaattgagcagacggattggtgatattgtaaatgggagttcttcactgggatttatcagtaatctgacatctttgaccaacttgtatgtgatgcctttttctatagagcattagagcttacaatattgtcaaagttacaagtcacctatatttgatttcatttttacagagtattaaggaactgcaggatatcggaaaaccttgaaacagtagatttttcgaagtttgcagcgttaaccatgctgtatgttttcattattggccatggtgcctgctataatgcttttggtcatttcctggaattgataagtatttgttcaagtaatgtttctttcctgtggcacagggacttgagttttaacaatattacaggccaagttcctcagtccatcctgaatctaggaatgcttcaattcctgtaaaaaaattctttatttaaatgaattaaattcatagaaacacctgataagattatgtccatgtttcatcattttgtattctgcacaattcaggtttcttgggaacaatagcctcataggaactttgcctgatgttataagctcttctttaaaagtgatgtacgtcaataagtatcgacatatcattatagcacaaaatattttcataatagaatgatatattcagttcaattgtaataatactgggctgtttccagagatttttcctacaatcatctcaccggaacctctccttcttgggctacccagaataatttgcaattgtgagtgtaaaagtttcaaatttttgtttccaagttcaaaaatagatattctaatgttttatttgaacaaggaatttggtggcaaacaacattgttcttggtagcaccaaaaacaggtacttataaaatttacttatactttcgccatttattaactgtaataaaatctttttcatggcttttacttttcaattcaaattatgcacagtataccttccggactaaactgcctccaacaagacactccttgtttccgtggatctcccaaatgtatatttgccactcctgttatctgtagtagttaacagaatgaaaggatttcggataatggttatagttttgcacagatgctatgattttgaatactggctataattttgcacatcttaattccagattattcgtttgcggttgactgcggcagtgatatatctactaggggctcagataataccatatatgaagcagatgctacaaaccttggggatgcatcatattatgttactgatcaaataagatggggtgtcagcaatgttggatacttttaccaagccacggatagaatggacataatatatagctctgagcattttcagactgcagtcgactcaaaattgttcgagactgcaaggatgtcaccatcttcactgagatattatgggcttggacttgagaatggaaattacactgttatgcttcaattcgcagagtttgcttttccagacacgcaaacttggctaagcttaggaaggagaatttttgacatatatgtccaggtacagattgagtgcattgtatagcaattggtttaccaagtcttttattctatatctgaaaatattactaacatttgcatagggtgctctgaaagaaaagaatttcgatataaggaagacagctggtggaaaatcttttaccgcaattaacaggacttacacggcaaccgtgttaaaaaacttcctcgagatccatctcttctgggctggcaagggcacttctggcatacctacccaaggttactacggaccgatgatctcagcattaagcgtcactccaagtaagcaaacctgttatattaacttcaatgtaggctacattggctctagtaagtaaaaacatttattttcagattttactccaactgtgcgaaatggtgtaccaaaaaagggaagcaaagcaggtgaaattgctggaatattgactggcgcttcagttttaggattagcaggcttatttggaatatttatgtggataaagaagcgaagaacaatggcaaagcagaaagaaggtatcctttttagtacagttattcagacaacataattttcaaattatttgttctttaccatctgctggaatgaaaaatacagaactgtacaacctggtcggacgacctgatgtcttcagtaactctgaactcaagctagccacagacaattttaattctcaaaacattatcggggaaggcggatacgggccagtgtataaggttgtctatttccctcaattgtctgatttggtattaagtgcaactttcttctccacgttcaaaatatacatgtaactttagacggttcttcattcaacagggtaagctacccgatggaagagttatagctgtgaaacaactttctgaatcatctcatcaaggcaaaagccaatttgttacggaggttgcaacaatttctgctgtgcaacaccggaatcttgtgaaactgcatggatgttgcattgacagcaacacaccattgttggtttatgagtaccttgaaaatggaagcctggatcaagcaatctttggtgagtttcacttctgcaaattgccagcacatatgaatatacttgatttctctaataaaactcccttgtttcatgaatacttgataattttcttctgtgtttttgcatcatttgtattgtcgaggctttatagagttatttcgacttgtgtaggacatagtagcttaaatctagactgggcaatgcgcttcgagatcattttaggcattgcaagaggcctaagttatcttcatgaggagtcgagtgtatgcatcgtgcatagggacatcaaagccagcaacatactacttgacactgatctgatcccaaagatctctgactttggactcgccaagctctatgatgagaagcaaactcatgtgagcacgggaattgcaggcacattgtaagaacataacaccatttctcttcttctagctgtaacttttgacatgaaagctacttttaacttgttttacctttgacaagtggctatctggctcctgagtatgcaatgagaggtcatttgacacaaaaggctgatgtttttgcatttggggtggttatgttggagacagttgctggtcgatcaaacactaataactctctcgaagaaagcaagatcaatctccttgaatgggtaataagctgatcaataatattttcatccaagaaaacattggtttaatttgtttatattcagggagtactattgatgtgaacttatcggggatactttagtattttcatggggtctgtttgtttgttaatagtttaaaattagagataagaatagttaatttccttattgtcgagttaccccttatggatatattccatgtattagggatagatcaattgaatcaactagctagacatacctacaaaagggtatagcatgcatcaattagcaagcaagcaatcaatatgaactaatctagtctcatttcatcctagatcaagccaacacttgcccatctatccttttttgtgtttgccctccatgaaccccctaagcgataaaaaaagttaatttctttgtattatctcttgtgtactaaacctatggtcatctataggcctgggaccagtatgaaaaggagcaagctctcagaatccttgacccaaatctcaagggattcaacaaggatgaagcttttagagtcatccgtgttgcgctgcactgcacgcagggctcaccacatcagcgaccaccaatgtcgaaggtcgtggcaatgctcaccggagaagttgaggtacctaaggtggtcacaaagccaagctacatcactgagtggcaaatgatggacggtaatagaagctatgtcaccagcagctactcagggtctaccacccatgagttcggcaggcagaacgagatcgaacctctgcagcaatcaccacctataatcaaagcgggaaggtgaatgcaaagttgaattgtgcagatggtcgattttgggttgatgtgacaatattgaatactgctcgttcttacttacatatatagttgcatgctgatgttagtggtatttggatatttatagatatttcaggaacaaagctgtaataagtttaaactgtaataaggggcgacccaatagtgtcataagaaacaaaacttcatggaataaatggttgacacatgaggcaatgaggtggac
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| CDS seq | atgcggcgtggcagcagcagcagcagcggtttcggtggccatctcctgtggctggtgcttgtattgtggtcatggcggatcgctgccgctcaagctcagcaagcaccaaaaactgatccaatcgaagtgtcagcactaaacacaataatggggagatggggcctgacggcaccatcggaatggaacatcagtggtgagccctgcagcggtgtagcctctgacaattccgactgggataactacccaaaagaccctgccatcaagtgtgactgctcttccaacgacaacaccatctgccatattatcaaactgagagtaagaaagttaaacgttgttggtcgaatacctgcagagctacagaatctcacctttctacaagacctgggcttgggtttcaatccactgtctggacaacttccgaaggaacttgggaacctcaccaatctcctctcactgggcattagcctggacaactttactggtgaacttcctgaagaactgggcaacttgaccaaacttgagcagttgtacattgatagttctggattcagcggcccgtttccttcgacgatctccaagcttaagaacctgaagaaagcgtcagataatgaattcacagggaaattaccggattacttggggagcttgactgaattggaagatctggctttccaaggaaattcttttgaagggccaattcctgcaagtttgtccaatctgaccaaactaacaaacttacggattggtgatattgtaaatgggagttcttcactgggatttatcagtaatctgacatctttgaccaacttagtattaaggaactgcaggatatcggaaaaccttgaaacagtagatttttcgaagtttcttgggaacaatagcctcataggaactttgcctgatgttataagctcttctttaaaagtgatgaatttggtggcaaacaacattgttcttggtagcaccaaaaacagtgatatatctactaggggctcagataataccatatatgaagcagatgctacaaaccttggggatgcatcatattatgttactgatcaaataagatggggtgtcagcaatgttggatacttttaccaagccacggatagaatggacataatatatagctctgagcattttcagactgcagtcgactcaaaattgttcgagactgcaaggatgtcaccatcttcactgagatattatgggcttggacttgagaatggaaattacactgttatgcttcaattcgcagagtttgcttttccagacacgcaaacttggctaagcttaggaaggagaatttttgacatatatgtccagggtgctctgaaagaaaagaatttcgatataaggaagacagctggtggaaaatcttttaccgcaattaacaggacttacacggcaaccgtgttaaaaaacttcctcgagatccatctcttctgggctggcaagggcacttctggcatacctacccaaggttactacggaccgatgatctcagcattaagcgtcactccaaattttactccaactgtgcgaaatggtgtaccaaaaaagggaagcaaagcaggtgaaattgctggaatattgactggcgcttcagttttaggattagcaggcttatttggaatatttatgtggataaagaagcgaagaacaatggcaaagcagaaagaagaactgtacaacctggtcggacgacctgatgtcttcagtaactctgaactcaagctagccacagacaattttaattctcaaaacattatcggggaaggcggatacgggccagtgtataagggtaagctacccgatggaagagttatagctgtgaaacaactttctgaatcatctcatcaaggcaaaagccaatttgttacggaggttgcaacaatttctgctgtgcaacaccggaatcttgtgaaactgcatggatgttgcattgacagcaacacaccattgttggtttatgagtaccttgaaaatggaagcctggatcaagcaatctttggtgatggctatctggctcctgagtatgcaatgagaggtcatttgacacaaaaggctgatgtttttgcatttggggtggttatgttggagacagttgctggtcgatcaaacactaataactctctcgaagaaagcaagatcaatctccttgaatgggcctgggaccagtatgaaaaggagcaagctctcagaatccttgacccaaatctcaagggattcaacaaggatgaagcttttagagtcatccgtgttgcgctgcactgcacgcagggctcaccacatcagcgaccaccaatgtcgaaggtcgtggcaatgctcaccggagaagttgaggtacctaaggtggtcacaaagccaagctacatcactgagtggcaaatgatggacggtaatagaagctatgtcaccagcagctactcagggtctaccacccatgagttcggcaggcagaacgagatcgaacctctgcagcaatcaccacctataatcaaagcgggaaggtga
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| Protein seq | MRRGSSSSSGFGGHLLWLVLVLWSWRIAAAQAQQAPKTDPIEVSALNTIMGRWGLTAPSEWNISGEPCSGVASDNSDWDNYPKDPAIKCDCSSNDNTICHIIKLRVRKLNVVGRIPAELQNLTFLQDLGLGFNPLSGQLPKELGNLTNLLSLGISLDNFTGELPEELGNLTKLEQLYIDSSGFSGPFPSTISKLKNLKKASDNEFTGKLPDYLGSLTELEDLAFQGNSFEGPIPASLSNLTKLTNLRIGDIVNGSSSLGFISNLTSLTNLVLRNCRISENLETVDFSKFLGNNSLIGTLPDVISSSLKVMNLVANNIVLGSTKNSDISTRGSDNTIYEADATNLGDASYYVTDQIRWGVSNVGYFYQATDRMDIIYSSEHFQTAVDSKLFETARMSPSSLRYYGLGLENGNYTVMLQFAEFAFPDTQTWLSLGRRIFDIYVQGALKEKNFDIRKTAGGKSFTAINRTYTATVLKNFLEIHLFWAGKGTSGIPTQGYYGPMISALSVTPNFTPTVRNGVPKKGSKAGEIAGILTGASVLGLAGLFGIFMWIKKRRTMAKQKEELYNLVGRPDVFSNSELKLATDNFNSQNIIGEGGYGPVYKGKLPDGRVIAVKQLSESSHQGKSQFVTEVATISAVQHRNLVKLHGCCIDSNTPLLVYEYLENGSLDQAIFGDGYLAPEYAMRGHLTQKADVFAFGVVMLETVAGRSNTNNSLEESKINLLEWAWDQYEKEQALRILDPNLKGFNKDEAFRVIRVALHCTQGSPHQRPPMSKVVAMLTGEVEVPKVVTKPSYITEWQMMDGNRSYVTSSYSGSTTHEFGRQNEIEPLQQSPPIIKAGR |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At1g56130 [UniProtKB/Swiss-Prot:C0LGH2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_05g0009310 | OsLiXu_05g0009310.01 | Chr05 | 9434072 | 9446300 | + | NAM | ||
| CDS seq | atgcggcgtggcagcagcagcagcagcggtttcggtggccatctcctgtggctggtgcttgtattgtggtcatggcggatcgctgccgctcaagctcagcaagcaccaaaaactgatccaatcgaagtgtcagcactaaacacaataatggggagatggggcctgacggcaccatcggaatggaacatcagtggtgagccctgcagcggtgtagcctctgacaattccgactgggataactacccaaaagaccctgccatcaagtgtgactgctcttccaacgacaacaccatctgccatattatcaaactgagagtaagaaagttaaacgttgttggtcgaatacctgcagagctacagaatctcacctttctacaagacctgggcttgggtttcaatccactgtctggacaacttccgaaggaacttgggaacctcaccaatctcctctcactgggcattagcctggacaactttactggtgaacttcctgaagaactgggcaacttgaccaaacttgagcagttgtacattgatagttctggattcagcggcccgtttccttcgacgatctccaagcttaagaacctgaagaaagcgtcagataatgaattcacagggaaattaccggattacttggggagcttgactgaattggaagatctggctttccaaggaaattcttttgaagggccaattcctgcaagtttgtccaatctgaccaaactaacaaacttacggattggtgatattgtaaatgggagttcttcactgggatttatcagtaatctgacatctttgaccaacttagtattaaggaactgcaggatatcggaaaaccttgaaacagtagatttttcgaagtttcttgggaacaatagcctcataggaactttgcctgatgttataagctcttctttaaaagtgatgaatttggtggcaaacaacattgttcttggtagcaccaaaaacagtgatatatctactaggggctcagataataccatatatgaagcagatgctacaaaccttggggatgcatcatattatgttactgatcaaataagatggggtgtcagcaatgttggatacttttaccaagccacggatagaatggacataatatatagctctgagcattttcagactgcagtcgactcaaaattgttcgagactgcaaggatgtcaccatcttcactgagatattatgggcttggacttgagaatggaaattacactgttatgcttcaattcgcagagtttgcttttccagacacgcaaacttggctaagcttaggaaggagaatttttgacatatatgtccagggtgctctgaaagaaaagaatttcgatataaggaagacagctggtggaaaatcttttaccgcaattaacaggacttacacggcaaccgtgttaaaaaacttcctcgagatccatctcttctgggctggcaagggcacttctggcatacctacccaaggttactacggaccgatgatctcagcattaagcgtcactccaaattttactccaactgtgcgaaatggtgtaccaaaaaagggaagcaaagcaggtgaaattgctggaatattgactggcgcttcagttttaggattagcaggcttatttggaatatttatgtggataaagaagcgaagaacaatggcaaagcagaaagaagaactgtacaacctggtcggacgacctgatgtcttcagtaactctgaactcaagctagccacagacaattttaattctcaaaacattatcggggaaggcggatacgggccagtgtataagggtaagctacccgatggaagagttatagctgtgaaacaactttctgaatcatctcatcaaggcaaaagccaatttgttacggaggttgcaacaatttctgctgtgcaacaccggaatcttgtgaaactgcatggatgttgcattgacagcaacacaccattgttggtttatgagtaccttgaaaatggaagcctggatcaagcaatctttggtgatggctatctggctcctgagtatgcaatgagaggtcatttgacacaaaaggctgatgtttttgcatttggggtggttatgttggagacagttgctggtcgatcaaacactaataactctctcgaagaaagcaagatcaatctccttgaatgggcctgggaccagtatgaaaaggagcaagctctcagaatccttgacccaaatctcaagggattcaacaaggatgaagcttttagagtcatccgtgttgcgctgcactgcacgcagggctcaccacatcagcgaccaccaatgtcgaaggtcgtggcaatgctcaccggagaagttgaggtacctaaggtggtcacaaagccaagctacatcactgagtggcaaatgatggacggtaatagaagctatgtcaccagcagctactcagggtctaccacccatgagttcggcaggcagaacgagatcgaacctctgcagcaatcaccacctataatcaaagcgggaaggtga
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| Protein seq | MRRGSSSSSGFGGHLLWLVLVLWSWRIAAAQAQQAPKTDPIEVSALNTIMGRWGLTAPSEWNISGEPCSGVASDNSDWDNYPKDPAIKCDCSSNDNTICHIIKLRVRKLNVVGRIPAELQNLTFLQDLGLGFNPLSGQLPKELGNLTNLLSLGISLDNFTGELPEELGNLTKLEQLYIDSSGFSGPFPSTISKLKNLKKASDNEFTGKLPDYLGSLTELEDLAFQGNSFEGPIPASLSNLTKLTNLRIGDIVNGSSSLGFISNLTSLTNLVLRNCRISENLETVDFSKFLGNNSLIGTLPDVISSSLKVMNLVANNIVLGSTKNSDISTRGSDNTIYEADATNLGDASYYVTDQIRWGVSNVGYFYQATDRMDIIYSSEHFQTAVDSKLFETARMSPSSLRYYGLGLENGNYTVMLQFAEFAFPDTQTWLSLGRRIFDIYVQGALKEKNFDIRKTAGGKSFTAINRTYTATVLKNFLEIHLFWAGKGTSGIPTQGYYGPMISALSVTPNFTPTVRNGVPKKGSKAGEIAGILTGASVLGLAGLFGIFMWIKKRRTMAKQKEELYNLVGRPDVFSNSELKLATDNFNSQNIIGEGGYGPVYKGKLPDGRVIAVKQLSESSHQGKSQFVTEVATISAVQHRNLVKLHGCCIDSNTPLLVYEYLENGSLDQAIFGDGYLAPEYAMRGHLTQKADVFAFGVVMLETVAGRSNTNNSLEESKINLLEWAWDQYEKEQALRILDPNLKGFNKDEAFRVIRVALHCTQGSPHQRPPMSKVVAMLTGEVEVPKVVTKPSYITEWQMMDGNRSYVTSSYSGSTTHEFGRQNEIEPLQQSPPIIKAGR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_05g0009310 | OsLiXu_05g0009310.02 | Chr05 | 9434112 | 9446537 | + | IsoSeq | ||
| CDS seq | atgtttttgcatttggggtggttatgttggagacagttgctggtcgatcaaacactaataactctctcgaagaaagcaagatcaatctccttgaatgggcctgggaccagtatgaaaaggagcaagctctcagaatccttgacccaaatctcaagggattcaacaaggatgaagcttttagagtcatccgtgttgcgctgcactgcacgcagggctcaccacatcagcgaccaccaatgtcgaaggtcgtggcaatgctcaccggagaagttgaggtacctaaggtggtcacaaagccaagctacatcactgagtggc
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| Protein seq | MFLHLGWLCWRQLLVDQTLITLSKKARSISLNGPGTSMKRSKLSESLTQISRDSTRMKLLESSVLRCTARRAHHISDHQCRRSWQCSPEKLRYLRWSQSQATSLSG |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr05 | 9440209 | 9441168 | + | OsLiXu_05g0009310.02 | OsLiXu_05g0009310.02,OsLiXu_05g0009310.01 | All |
| SE | Chr05 | 9442930 | 9443166 | + | OsLiXu_05g0009310.02 | OsLiXu_05g0009310.02,OsLiXu_05g0009310.01 | All |
| A5 | Chr05 | 9441760 | 9441849 | + | OsLiXu_05g0009310.02 | OsLiXu_05g0009310.02,OsLiXu_05g0009310.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.706769 | 0.577813 | 1.547415 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0256100 | RBH | 2.364908 | 1.882851 | 3.376952 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g16670 | RBH | 1.501637 | 1.219637 | 0.663256 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0256100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0009280 | RBH | 0.401567 | 4.308081 | 8.507330 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0009320 | RBH | 0.114683 | 2.032389 | 3.418265 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0009210 | RBH | 2.101959 | 2.136555 | 10.866601 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0009310 | RBH | 0.284537 | 0.079938 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0009350 | RBH | 3.844650 | 23.663565 | 23.552858 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0142500 | SBH | 2.8956355 | 3.118633 | 12.039519 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0009220 | RBH | 0.300787 | 0.676550 | 1.705540 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0143100 | SBH | 4.1391485 | 4.465193 | 10.8821795 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0009210 | RBH | 0.547659 | 0.253251 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0009160 | RBH | 0.369889 | 9.903003 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0009260 | RBH | 6.403812 | 23.948978 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0026620 | SBH | 1.068267 | 0.108958 | 0.231745 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0009270 | RBH | 1.066535 | 7.843574 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G009080 | RBH | 0.770879 | 4.755791 | 2.287322 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0009370 | RBH | 3.133708 | 9.644751 | 5.737181 |
