Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_05g0007280 | OGI:05018330 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr05:6669446-6673173 | ||||||||
| Gene Symbol | GELP63, OsGELP63 | ||||||||||
| DNA seq | atccatcgtcctagctatctcacgtagtctccctctcccggtcgccgcgacgacgctagctttacacgttcgtgataatggcggcgctggtgctgctggcggcggcgatggtggtggtggtgttcgcgcacgcggcggcggcgcagcggtacaatgctatctacagcttcggcgactccatctccgacaccggcaacctctgcgtcggcggctgcccgtcgtggctcaccaccggccagcccccctacggcaagaccttcttcggccgccccaccggccgctgctccgacggccgcgtcgtcgtcgacttcctcggtaggacgacgtcctgatcgatcgatcgatcgagctagtagtggagaaaatgacatgtgaatttcatgcatatatgcagctgagcactttgggctgccgctgccgccggcgtcgaagggcggcggcgacttcaagaagggggcgaacatggcgatcatcggcgccacctccatggacgccgccttcttcaagtccatcggcctcagcgacaagatttggaacaatggCcccctcgacacccagatccagtggttccgtcagctcctcccctccgtctgcggcaacggtaactaactaattattcaacatcttattaattaccacagtaactaccactgtaattaatgatccaattcattgattagtcgtctcaccaacaactaccagtatatatatgcatgtggagtaattaattaattaattaacggacgaactgatggatcgatcggatcacgggtgtgtgtagattgcaggagctacctgtccaagtcgctgttcgtggtgggcgagttcggcggcaacgactacaacgcgccgctcttcgccggccgcgccatgacggaggtcagggactacgtgccacaggtcgtcagcaagatcatccgtggcctcgaggtaactaaccaactaacctgatcatttcacgctctccacctgatcaactcacgagagttggatcacggatgactccaaaatggaaaaaaaaacaaattgtccgccaaacagtctatttcctccttcctacagtatcagattaatttcacacaaactatttttttatatagaaattgccctataatatcaaatatatcttttttcaagttaatttgtaataattaaaactcaattgatcattcgctaatggctttcctgttttaaatgcccttacgtacttaatcttaatcttcatctatcttaaattaagcctaaattactatattttaggatagataaagtacttttttttatcgtaactcgtataggcaacaaaacaatcatgtaaattttgcgcgcgacttgtgaacagacattgatcaggatgggcgcggtggacgtggtggtgccaggggttctacccatcgggtgcttcccaatctacctgacgctctatggcacatccaacggtgcagactacgatcgcaatggttgcctcaagagctacaatagcctctcctcctaccacaacacgttgctcaagagaagcctctccaacctccagaggacgtacccacatgccagggtcatgtacgctgatttctactcgcaggtcactgccatggtccgctctccccaaaacttcggtgagttgatcatactatttctcatctcataaccgcactaaaacatactacctccgtttgataaaaaaactgaagttttgactatgcacctggacagatcaatatgtgattttttagaacggcgtattatattagtaaatcttgacttacctgtcgttttcttgtttatttgagggtcatggacttatcaatgatatgaaacctatcgctattttttctgttaggcttgatttttttttttttgcaaaatggaatttaatccagccttgttatggttgataggagataaccgttttataaaattttacaagctatttcgtaggaactaggaagcataatatttagatcagcctataaattctattttgtatagtagttaacagatcagccctgaacattactgcccagagctgcaaggcaccatcgttgtccggtagcacacatcacccttttatgtgctaaaaatcaaaagcgtcccagaatccagttgccgtgacagagttgaagttttcagtggtcacggcatgtttagtgtaggttagctaggggtacatggcccacacgtcagatctaggtaaaggatatatccaaaggttgttagagataagtataaattaatacactgtacgtgcataacaacaagctttacatctccaaatagtccaattacttgttggattcttagctcacttgtcctgttagtgtggcaaatgatttgtgccttccctgtgtggaccattcatgacctctgtccatatactagctagtacagtataatttaggaattgataccttgtaatccaattggaatggcatctatcatactatatcaaatactccctccgtttcaaaatgtttgacaccgttgactttttagcacgtgtttgaccattcatcttattaaaaaaatttgtgaaatatgtaaaactatatgtgtacatgaaaatatatttaacaataaatcaaatgatatgaaaagaataaataattatttaaataagacgaatggtcaaacacgtattaaaaagttaacggtgtcaaatattttgaaacggagggagtattatgaaataataacaactggcatgatttatgtaatactagtgctaaagcatgcatgcatgtatcacagctagctagctcttctttgcatgcgacatcgtccaattgaaaacaaagataccctttggccaaaagctcatggccacaaattaaaacaaaacaaaggaacatgttcatatctttgcatgatcttgaaagttcaaaccctctcagccttgctctgcttgcaccactgcaaaagaacagagcacacattacaaagcaaaccgaaaaaacgaaaaaaaaaacaacggcactatttgaaacatagaaatattattttatcaaagatagatttaaaaccgagcctctacatctaaactagatatacacagccaaataaataatgcaaaaatctgacactacatatttctgccattgtaaaactatttctagtgaaacatccgagacacgtatatatgacatcaatttctaagataagtgaaaaattgtttacatctccggtatccaccgatcaatatatttatttggagagtgatattggttgctcaccttgttaatataatatggcagggctgaaatacgggctgaaggtgtgctgcggggcgggagggcaggggacgtacaactacaacaacaaggcgcggtgcggcatgtccgggtccagcgcctgcgccgacccggccaactacctcatctgggacggcatccacctcaccgaggccgcctaccgctccatcgccgatggctggctcaagggcccctactgcaaccctcccatcctccactgatttattaatcctacatgtataatatctgcagggagatgagatgtgacccaattaattgtgcactgtttgcttaattaggccgaagtgtgtgtttgtatttgtgtgtgggttaattaatatttgttcatggggtttacttaattagagtttggttgtgatttggagagggtgattttaagcctgacgatgtatttagttggggatcgaatcaaactgatccaagtgaataatgaagctcaaacaagggcttttccatttt
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| CDS seq | atggcggcgctggtgctgctggcggcggcgatggtggtggtggtgttcgcgcacgcggcggcggcgcagcggtacaatgctatctacagcttcggcgactccatctccgacaccggcaacctctgcgtcggcggctgcccgtcgtggctcaccaccggccagcccccctacggcaagaccttcttcggccgccccaccggccgctgctccgacggccgcaagggggcgaacatggcgatcatcggcgccacctccatggacgccgccttcttcaagtccatcggcctcagcgacaagatttggaacaatggCcccctcgacacccagatccagtggttccgtcagctcctcccctccgtctgcggcaacgattgcaggagctacctgtccaagtcgctgttcgtggtgggcgagttcggcggcaacgactacaacgcgccgctcttcgccggccgcgccatgacggaggtcagggactacgtgccacaggtcgtcagcaagatcatccgtggcctcgagacattgatcaggatgggcgcggtggacgtggtggtgccaggggttctacccatcgggtgcttcccaatctacctgacgctctatggcacatccaacggtgcagactacgatcgcaatggttgcctcaagagctacaatagcctctcctcctaccacaacacgttgctcaagagaagcctctccaacctccagaggacgtacccacatgccagggtcatgtacgctgatttctactcgcaggtcactgccatggtgtgctgcggggcgggagggcaggggacgtacaactacaacaacaaggcgcggtgcggcatgtccgggtccagcgcctgcgccgacccggccaactacctcatctgggacggcatccacctcaccgaggccgcctaccgctccatcgccgatggctggctcaagggcccctactgcaaccctcccatcctccactga
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| Protein seq | MAALVLLAAAMVVVVFAHAAAAQRYNAIYSFGDSISDTGNLCVGGCPSWLTTGQPPYGKTFFGRPTGRCSDGRKGANMAIIGATSMDAAFFKSIGLSDKIWNNGPLDTQIQWFRQLLPSVCGNDCRSYLSKSLFVVGEFGGNDYNAPLFAGRAMTEVRDYVPQVVSKIIRGLETLIRMGAVDVVVPGVLPIGCFPIYLTLYGTSNGADYDRNGCLKSYNSLSSYHNTLLKRSLSNLQRTYPHARVMYADFYSQVTAMVCCGAGGQGTYNYNNKARCGMSGSSACADPANYLIWDGIHLTEAAYRSIADGWLKGPYCNPPILH |
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| Function | GDSL esterase/lipase At5g45910 [UniProtKB/Swiss-Prot:Q9FJ45] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_05g0007280 | OsLiXu_05g0007280.01 | Chr05 | 6669523 | 6673173 | + | NAM | ||
| CDS seq | atggcggcgctggtgctgctggcggcggcgatggtggtggtggtgttcgcgcacgcggcggcggcgcagcggtacaatgctatctacagcttcggcgactccatctccgacaccggcaacctctgcgtcggcggctgcccgtcgtggctcaccaccggccagcccccctacggcaagaccttcttcggccgccccaccggccgctgctccgacggccgcaagggggcgaacatggcgatcatcggcgccacctccatggacgccgccttcttcaagtccatcggcctcagcgacaagatttggaacaatggCcccctcgacacccagatccagtggttccgtcagctcctcccctccgtctgcggcaacgattgcaggagctacctgtccaagtcgctgttcgtggtgggcgagttcggcggcaacgactacaacgcgccgctcttcgccggccgcgccatgacggaggtcagggactacgtgccacaggtcgtcagcaagatcatccgtggcctcgagacattgatcaggatgggcgcggtggacgtggtggtgccaggggttctacccatcgggtgcttcccaatctacctgacgctctatggcacatccaacggtgcagactacgatcgcaatggttgcctcaagagctacaatagcctctcctcctaccacaacacgttgctcaagagaagcctctccaacctccagaggacgtacccacatgccagggtcatgtacgctgatttctactcgcaggtcactgccatggtgtgctgcggggcgggagggcaggggacgtacaactacaacaacaaggcgcggtgcggcatgtccgggtccagcgcctgcgccgacccggccaactacctcatctgggacggcatccacctcaccgaggccgcctaccgctccatcgccgatggctggctcaagggcccctactgcaaccctcccatcctccactga
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| Protein seq | MAALVLLAAAMVVVVFAHAAAAQRYNAIYSFGDSISDTGNLCVGGCPSWLTTGQPPYGKTFFGRPTGRCSDGRKGANMAIIGATSMDAAFFKSIGLSDKIWNNGPLDTQIQWFRQLLPSVCGNDCRSYLSKSLFVVGEFGGNDYNAPLFAGRAMTEVRDYVPQVVSKIIRGLETLIRMGAVDVVVPGVLPIGCFPIYLTLYGTSNGADYDRNGCLKSYNSLSSYHNTLLKRSLSNLQRTYPHARVMYADFYSQVTAMVCCGAGGQGTYNYNNKARCGMSGSSACADPANYLIWDGIHLTEAAYRSIADGWLKGPYCNPPILH
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_05g0007280 | OsLiXu_05g0007280.02 | Chr05 | 6669446 | 6673010 | + | IsoSeq | ||
| CDS seq | atgctatctacagcttcggcgactccatctccgacaccggcaacctctgcgtcggcggctgcccgtcgtggctcaccaccggccagcccccctacggcaagaccttcttcggccgccccaccggccgctgctccgacggccgcgtcgtcgtcgacttcctcgctgagcactttgggctgccgctgccgccggcgtcgaagggcggcggcgacttcaagaagggggcgaacatggcgatcatcggcgccacctccatggacgccgccttcttcaagtccatcggcctcagcgacaagatttggaacaatggCcccctcgacacccagatccagtggttccgtcagctcctcccctccgtctgcggcaacgattgcaggagctacctgtccaagtcgctgttcgtggtgggcgagttcggcggcaacgactacaacgcgccgctcttcgccggccgcg
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| Protein seq | MLSTASATPSPTPATSASAAARRGSPPASPPTARPSSAAPPAAAPTAASSSTSSLSTLGCRCRRRRRAAATSRRGRTWRSSAPPPWTPPSSSPSASATRFGTMAPSTPRSSGSVSSSPPSAATIAGATCPSRCSWWASSAATTTTRRSSPAA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.376941 | 5.407441 | 0.254296 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0209600 | RBH | 0.0 | 0.0 | 9.477848 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g11910 | RBH | 0.0 | 0.0 | 2.169226 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0209600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0007220 | RBH | 0.000000 | 8.980595 | 12.499147 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0007260 | RBH | 0.0 | 16.111422 | 2.170479 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0007150 | RBH | 0.294508 | 53.008179 | 11.066650 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0007200 | RBH | 0.0 | 1.273613 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0007290 | RBH | 1.308545 | 59.721699 | 5.221503 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0101500 | RBH | 9.0536385 | 7.2555275 | 145.339592 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0007150 | RBH | 0.0 | 6.125422 | 0.988225 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0100300 | RBH | 19.8643865 | 3.518067 | 0.952941 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0007180 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0007120 | RBH | 0.079071 | 9.403201 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0007220 | RBH | 0.0 | 32.744411 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0007230 | RBH | 0.119868 | 34.482330 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G007000 | RBH | 0.218482 | 20.164368 | 7.979433 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0007240 | RBH | 0.333273 | 27.486256 | 4.407985 |
