Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_04g0032380 | OGI:01114160 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr04:37797575-37797823 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atggagcccctccaaattgtcagagtgaatgcaagggcaaaaatttctacaccttctggtggctcagctagggttgatttgcaggccaatgttgcaggctccaacagctctacaagtgcagctgtcactgttacttcagggaaagcatctgtatctgtttcagctcaagaacctgccaggacaactacaaagaacaaagctaaagtaccactgcttcttctccctccatgggaatctgacaaactatga |
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| CDS seq | atggagcccctccaaattgtcagagtgaatgcaagggcaaaaatttctacaccttctggtggctcagctagggttgatttgcaggccaatgttgcaggctccaacagctctacaagtgcagctgtcactgttacttcagggaaagcatctgtatctgtttcagctcaagaacctgccaggacaactacaaagaacaaagctaaagtaccactgcttcttctccctccatgggaatctgacaaactatga |
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| Protein seq | MEPLQIVRVNARAKISTPSGGSARVDLQANVAGSNSSTSAAVTVTSGKASVSVSAQEPARTTTKNKAKVPLLLLPPWESDKL |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_04g0032380 | OsLiXu_04g0032380.01 | Chr04 | 37797575 | 37797823 | + | NAM | ||
| CDS seq | atggagcccctccaaattgtcagagtgaatgcaagggcaaaaatttctacaccttctggtggctcagctagggttgatttgcaggccaatgttgcaggctccaacagctctacaagtgcagctgtcactgttacttcagggaaagcatctgtatctgtttcagctcaagaacctgccaggacaactacaaagaacaaagctaaagtaccactgcttcttctccctccatgggaatctgacaaactatga
More
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| Protein seq | MEPLQIVRVNARAKISTPSGGSARVDLQANVAGSNSSTSAAVTVTSGKASVSVSAQEPARTTTKNKAKVPLLLLPPWESDKL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.021429 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0578900 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g35970 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0578900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0018700 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0018590 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0018510 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0018720 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0032770 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0560600 | RBH | 0 | 0.048707 | 0.0348155 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0031380 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0463600 | SBH | 0 | 0 | 0.010236 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0031850 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0026360 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0031800 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0041970 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0032330 | RBH | 0.123120 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G031840 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0021140 | SBH | 0.0 | 0.0 | 0.0 |
