Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_04g0026860 | OGI:04092690 | 15/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr04:33625779-33628730 | ||||||||
| Gene Symbol | RLCK161, OsRLCK161, OsCrRLK1L9 | ||||||||||
| DNA seq | acaaatatgataatcacaagcttcataacatttcatatgacgaaacgcctcaatgtggcattcgacgtacagaaaccaaatcccatttggtactataagttgaaagagataattatattatcagtacgatttatacaggtcacacaggtcgacctaaacccagttgttaaacaaatagcatggtacagcaggatgtcaaggaaaaacttgacgcttccatgtttctctcttcTtttttttttttgaaaatctacaaaaatcctattattctacacttgttgaacaggacacaaaaaaaaatcagaagaaaccggcaaagctaagaacctacacgaacaatatcacacaattttacaacaagatcattgctagaattcaatcaagatatttcagtgggttaccagatgtcagaaaccctcaagtgtctggatcttctcttatactagatggctttgagtgatgttcctcttctccctctctgatatgaggcaggctaaaggacatatcggcaaatcccagttcactgcttccaaatgattcacagtccacattattacgcttgtaagcttcatggagctgcagcacatattccagatgccacaagacctcacccatcgatggcctgcttctcccatcatcagcaaggcacttctccgcaatttcaccaaacttcttcaaggattcagatgaaaagtcaccgtccagccgtggatccactattgcatccagcgaacgctggcgctgccatctcattgcccactctgccaagttgatttgatcctttggtagagtggggtctataactggtctgccacaagcgacttcaaagagcaccactccaaaagaatacacatcagatttttgtgtgagttgctgcctccggaagtactcaggatcaaggtacccaaagcttcccttgactgctgtactaacatgggtctggtccagtgttgggccagttttagacagaccaaaatctgctatctttgcaacaaaattctcatccaacaagatgtttgtagtcttcacatccctatggattatacctcggtctgctccagtgtggaggtagtgaagcccacgagctgcaccaatgcaggcatcaactcgttgcttccatgtcagaggtgggaggtcacttccataaagatggcttcgcaatgtccccttggccatgtattcgtagactagaatcatttccttctgctcttcacagtagccaatcattgcaacaaggtgccggtgcctaagcttggagagcatctcaatttctgtttcaaattctttcaagccctggccacataatggatttgcacgcttgattgccactgtagtaccctcatcgacctcacccttgtaaaccttgccaaaaccaccagtaccaataagcaaagcctcatcaaagttctttgtagcagccctaatctctgaaatgctgaatcttctgcccattctatgaccaatggaagatgaattacgtgtcaagggtgatttaccggctgcacgggcatctgtggtgcttttcatagcctcatggaggaccagtgggtgccaaccgggaggggcctccttctcatcagcttttcgtttccttcttacatagcaccatgcaaatagaaccacacttgtcagtgtcacaaaagaagctgagccaattccgacttcttcccataaaattttcctatttctatccttggaaatacccctttggttacccatgtcaatatggccaagaacataagcgaggttgccattcctgctgagcttgaatatctccaaaccattcagaagtggatcggtgcctgaagcactggtcaaggagtcagggcctagctgaagccagagtgagtctacctgctgtggcaagttgtcaaaatagtcttcatgatatgccttattaataccccctgccctgacatacacatcatagtcctcagcagctgtcttgttgttgatgtagatcttgaagaccctctggttgggcttgtcatagaaaagctcacagaaatgaaggcggaccaagtaatcaaagttggggtggacatagaatcgccatgaaacattgaaccgcttgtccacaaccatgttgttgctcatgattcttgcagtctcgtatacatcaatgggagaaattgaggagtcattgtttgagagataacttacacttgaagtgttggacacaatctgagcagcattcgcagaaaacatgaatgcttcatcagtgtaccatggtctgtgcagatactgatcgctggaagaattaagtgcatgccctccaacattcaaccggtacattgtctctaggcctctgttgcttaaaccaagaggaagctgcccatttccagcgctgccaactttgtttactgtgtcattgaacaggttatctggagtgagcatcacctcaattgcattcacaaaggcaaatgacccagggcttggatcaaactcaacctgcagaccacgagaaccaactaaaagaaaatactccttgacaactgcattgatggctgaattgctcacagtgctcctccaaacaatctcctctgacacgttgaatttggagaccagcttgaaatcatttgcagtgacatcAaacaatgaatcattcccactgaaattcccgaatgtgtaagggaagaaatgcagcctgaggcagtagttccccggcagcacgctgaagttataccaagatgccgtgctaaagaaacgcgcggaatggtacaccagtccgaagatttcattgccattgctgctcccagcctgcgacgcagctattccagggctgcttaaggtaaaattcagcccGggggccatgtcgccgatccatctccggccgccagcatccacagtcgcgtttgaaccacagctgagaagcaaatccctcccatgaactcccaacaggtgcaaattagcaagcacgatgcttgcaactgccagcgcaagtagcctcat
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| CDS seq | atgaggctacttgcgctggcagttgcaagcatcgtgcttgctaatttgcacctgttgggagttcatgggagggatttgcttctcagctgtggttcaaacgcgactgtggatgctggcggccggagatggatcggcgacatggccccCgggctgaattttaccttaagcagccctggaatagctgcgtcgcaggctgggagcagcaatggcaatgaaatcttcggactggtgtaccattccgcgcgtttctttagcacggcatcttggtataacttcagcgtgctgccggggaactactgcctcaggctgcatttcttcccttacacattcgggaatttcagtgggaatgattcattgttTgatgtcactgcaaatgatttcaagctggtctccaaattcaacgtgtcagaggagattgtttggaggagcactgtgagcaattcagccatcaatgcagttgtcaaggagtattttcttttagttggttctcgtggtctgcaggttgagtttgatccaagccctgggtcatttgcctttgtgaatgcaattgaggtgatgctcactccagataacctgttcaatgacacagtaaacaaagttggcagcgctggaaatgggcagcttcctcttggtttaagcaacagaggcctagagacaatgtaccggttgaatgttggagggcatgcacttaattcttccagcgatcagtatctgcacagaccatggtacactgatgaagcattcatgttttctgcgaatgctgctcagattgtgtccaacacttcaagtgtaagttatctctcaaacaatgactcctcaatttctcccattgatgtatacgagactgcaagaatcatgagcaacaacatggttgtggacaagcggttcaatgtttcatggcgattctatgtccaccccaactttgattacttggtccgccttcatttctgtgagcttttctatgacaagcccaaccagagggtcttcaagatctacatcaacaacaagacagctgctgaggactatgatgtgtatgtcagggcagggggtattaataaggcatatcatgaagactattttgacaacttgccacagcaggtagactcactctggcttcagctaggccctgactccttgaccagtgcttcaggcaccgatccacttctgaatggtttggagatattcaagctcagcaggaatggcaacctcgcttatgttcttggccatattgacatgggtaaccaaaggggtatttccaaggatagaaataggaaaattttatgggaagaagtcggaattggctcagcttcttttgtgacactgacaagtgtggttctatttgcatggtgctatgtaagaaggaaacgaaaagctgatgagaaggaggcccctcccggttggcacccactggtcctccatgaggctatgaaaagcaccacagatgcccgtgcagccggtaaatcacccttgacacgtaattcatcttccattggtcatagaatgggcagaagattcagcatttcagagattagggctgctacaaagaactttgatgaggctttgcttattggtactggtggttttggcaaggtttacaagggtgaggtcgatgagggtactacagtggcaatcaagcgtgcaaatccattatgtggccagggcttgaaagaatttgaaacagaaattgagatgctctccaagcttaggcaccggcaccttgttgcaatgattggctactgtgaagagcagaaggaaatgattctagtctacgaatacatggccaaggggacattgcgaagccatctttatggaagtgacctcccacctctgacatggaagcaacgagttgatgcctgcattggtgcagctcgtgggcttcactacctccacactggagcagaccgaggtataatccatagggatgtgaagactacaaacatcttgttggatgagaattttgttgcaaagatagcagattttggtctgtctaaaactggcccaacactggaccagacccatgttagtacagcagtcaagggaagctttgggtaccttgatcctgagtacttccggaggcagcaactcacacaaaaatctgatgtgtattcttttggagtggtgctctttgaagtcgcttgtggcagaccagttatagaccccactctaccaaaggatcaaatcaacttggcagagtgggcaatgagatggcagcgccagcgttcgctggatgcaatagtggatccacggctggacggtgacttttcatctgaatccttgaagaagtttggtgaaattgcggagaagtgccttgctgatgatgggagaagcaggccatcgatgggtgaggtcttgtggcatctggaatatgtgctgcagctccatgaagcttacaagcgtaataatgtggactgtgaatcatttggaagcagtgaactgggatttgccgatatgtcctttagcctgcctcatatcagagagggagaagaggaacatcactcaaagccatctagtataagagaagatccagacacttga
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| Protein seq | MRLLALAVASIVLANLHLLGVHGRDLLLSCGSNATVDAGGRRWIGDMAPGLNFTLSSPGIAASQAGSSNGNEIFGLVYHSARFFSTASWYNFSVLPGNYCLRLHFFPYTFGNFSGNDSLFDVTANDFKLVSKFNVSEEIVWRSTVSNSAINAVVKEYFLLVGSRGLQVEFDPSPGSFAFVNAIEVMLTPDNLFNDTVNKVGSAGNGQLPLGLSNRGLETMYRLNVGGHALNSSSDQYLHRPWYTDEAFMFSANAAQIVSNTSSVSYLSNNDSSISPIDVYETARIMSNNMVVDKRFNVSWRFYVHPNFDYLVRLHFCELFYDKPNQRVFKIYINNKTAAEDYDVYVRAGGINKAYHEDYFDNLPQQVDSLWLQLGPDSLTSASGTDPLLNGLEIFKLSRNGNLAYVLGHIDMGNQRGISKDRNRKILWEEVGIGSASFVTLTSVVLFAWCYVRRKRKADEKEAPPGWHPLVLHEAMKSTTDARAAGKSPLTRNSSSIGHRMGRRFSISEIRAATKNFDEALLIGTGGFGKVYKGEVDEGTTVAIKRANPLCGQGLKEFETEIEMLSKLRHRHLVAMIGYCEEQKEMILVYEYMAKGTLRSHLYGSDLPPLTWKQRVDACIGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKIADFGLSKTGPTLDQTHVSTAVKGSFGYLDPEYFRRQQLTQKSDVYSFGVVLFEVACGRPVIDPTLPKDQINLAEWAMRWQRQRSLDAIVDPRLDGDFSSESLKKFGEIAEKCLADDGRSRPSMGEVLWHLEYVLQLHEAYKRNNVDCESFGSSELGFADMSFSLPHIREGEEEHHSKPSSIREDPDT |
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| Function | Probable receptor-like protein kinase At1g30570 [UniProtKB/Swiss-Prot:Q9SA72] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_04g0026860 | OsLiXu_04g0026860.01 | Chr04 | 33625779 | 33628730 | - | NAM | ||
| CDS seq | atgaggctacttgcgctggcagttgcaagcatcgtgcttgctaatttgcacctgttgggagttcatgggagggatttgcttctcagctgtggttcaaacgcgactgtggatgctggcggccggagatggatcggcgacatggccccCgggctgaattttaccttaagcagccctggaatagctgcgtcgcaggctgggagcagcaatggcaatgaaatcttcggactggtgtaccattccgcgcgtttctttagcacggcatcttggtataacttcagcgtgctgccggggaactactgcctcaggctgcatttcttcccttacacattcgggaatttcagtgggaatgattcattgttTgatgtcactgcaaatgatttcaagctggtctccaaattcaacgtgtcagaggagattgtttggaggagcactgtgagcaattcagccatcaatgcagttgtcaaggagtattttcttttagttggttctcgtggtctgcaggttgagtttgatccaagccctgggtcatttgcctttgtgaatgcaattgaggtgatgctcactccagataacctgttcaatgacacagtaaacaaagttggcagcgctggaaatgggcagcttcctcttggtttaagcaacagaggcctagagacaatgtaccggttgaatgttggagggcatgcacttaattcttccagcgatcagtatctgcacagaccatggtacactgatgaagcattcatgttttctgcgaatgctgctcagattgtgtccaacacttcaagtgtaagttatctctcaaacaatgactcctcaatttctcccattgatgtatacgagactgcaagaatcatgagcaacaacatggttgtggacaagcggttcaatgtttcatggcgattctatgtccaccccaactttgattacttggtccgccttcatttctgtgagcttttctatgacaagcccaaccagagggtcttcaagatctacatcaacaacaagacagctgctgaggactatgatgtgtatgtcagggcagggggtattaataaggcatatcatgaagactattttgacaacttgccacagcaggtagactcactctggcttcagctaggccctgactccttgaccagtgcttcaggcaccgatccacttctgaatggtttggagatattcaagctcagcaggaatggcaacctcgcttatgttcttggccatattgacatgggtaaccaaaggggtatttccaaggatagaaataggaaaattttatgggaagaagtcggaattggctcagcttcttttgtgacactgacaagtgtggttctatttgcatggtgctatgtaagaaggaaacgaaaagctgatgagaaggaggcccctcccggttggcacccactggtcctccatgaggctatgaaaagcaccacagatgcccgtgcagccggtaaatcacccttgacacgtaattcatcttccattggtcatagaatgggcagaagattcagcatttcagagattagggctgctacaaagaactttgatgaggctttgcttattggtactggtggttttggcaaggtttacaagggtgaggtcgatgagggtactacagtggcaatcaagcgtgcaaatccattatgtggccagggcttgaaagaatttgaaacagaaattgagatgctctccaagcttaggcaccggcaccttgttgcaatgattggctactgtgaagagcagaaggaaatgattctagtctacgaatacatggccaaggggacattgcgaagccatctttatggaagtgacctcccacctctgacatggaagcaacgagttgatgcctgcattggtgcagctcgtgggcttcactacctccacactggagcagaccgaggtataatccatagggatgtgaagactacaaacatcttgttggatgagaattttgttgcaaagatagcagattttggtctgtctaaaactggcccaacactggaccagacccatgttagtacagcagtcaagggaagctttgggtaccttgatcctgagtacttccggaggcagcaactcacacaaaaatctgatgtgtattcttttggagtggtgctctttgaagtcgcttgtggcagaccagttatagaccccactctaccaaaggatcaaatcaacttggcagagtgggcaatgagatggcagcgccagcgttcgctggatgcaatagtggatccacggctggacggtgacttttcatctgaatccttgaagaagtttggtgaaattgcggagaagtgccttgctgatgatgggagaagcaggccatcgatgggtgaggtcttgtggcatctggaatatgtgctgcagctccatgaagcttacaagcgtaataatgtggactgtgaatcatttggaagcagtgaactgggatttgccgatatgtcctttagcctgcctcatatcagagagggagaagaggaacatcactcaaagccatctagtataagagaagatccagacacttga
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| Protein seq | MRLLALAVASIVLANLHLLGVHGRDLLLSCGSNATVDAGGRRWIGDMAPGLNFTLSSPGIAASQAGSSNGNEIFGLVYHSARFFSTASWYNFSVLPGNYCLRLHFFPYTFGNFSGNDSLFDVTANDFKLVSKFNVSEEIVWRSTVSNSAINAVVKEYFLLVGSRGLQVEFDPSPGSFAFVNAIEVMLTPDNLFNDTVNKVGSAGNGQLPLGLSNRGLETMYRLNVGGHALNSSSDQYLHRPWYTDEAFMFSANAAQIVSNTSSVSYLSNNDSSISPIDVYETARIMSNNMVVDKRFNVSWRFYVHPNFDYLVRLHFCELFYDKPNQRVFKIYINNKTAAEDYDVYVRAGGINKAYHEDYFDNLPQQVDSLWLQLGPDSLTSASGTDPLLNGLEIFKLSRNGNLAYVLGHIDMGNQRGISKDRNRKILWEEVGIGSASFVTLTSVVLFAWCYVRRKRKADEKEAPPGWHPLVLHEAMKSTTDARAAGKSPLTRNSSSIGHRMGRRFSISEIRAATKNFDEALLIGTGGFGKVYKGEVDEGTTVAIKRANPLCGQGLKEFETEIEMLSKLRHRHLVAMIGYCEEQKEMILVYEYMAKGTLRSHLYGSDLPPLTWKQRVDACIGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKIADFGLSKTGPTLDQTHVSTAVKGSFGYLDPEYFRRQQLTQKSDVYSFGVVLFEVACGRPVIDPTLPKDQINLAEWAMRWQRQRSLDAIVDPRLDGDFSSESLKKFGEIAEKCLADDGRSRPSMGEVLWHLEYVLQLHEAYKRNNVDCESFGSSELGFADMSFSLPHIREGEEEHHSKPSSIREDPDT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.497460 | 0.766923 | 0.623358 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0619600 | RBH | 0.429309 | 0.765098 | 1.319568 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g52860 | RBH | 0.277087 | 0.501691 | 0.324198 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0619600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0026810 | RBH | 0.055826 | 4.241183 | 2.648667 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0027590 | RBH | 0.043533 | 1.441995 | 1.263705 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0027320 | RBH | 0.381933 | 2.695840 | 3.648110 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0027010 | RBH | 0.062623 | 0.155739 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0027300 | RBH | 0.756193 | 6.159431 | 2.683366 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0394600 | SBH | 6.139429 | 32.1948635 | 9.6629515 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0026110 | RBH | 0.046560 | 0.611001 | 0.864301 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0499800 | RBH | 3.47952 | 3.8582465 | 10.6289555 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0026520 | RBH | 0.0 | 0.246833 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0026350 | RBH | 0.0 | 4.202084 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0026400 | RBH | 2.388750 | 14.944486 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0027030 | RBH | 0.045929 | 5.636862 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G026260 | RBH | 0.183920 | 3.817338 | 1.706079 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0026110 | RBH | 0.356525 | 11.817934 | 3.377017 |
