Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_04g0025600 | OGI:04090180 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr04:32577918-32585603 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gctgtaattatcgatcgcattatgccttcatataattgtgagtacgacaaaggaccacccccaatggaagaatgcaagtgcagcaacactgcaaaagaatactcagacgggctgaggcaacgcaacgcaactcccagtttgaaactacaaataattcatgtcgccagcaatgaatcgcactgctccacaattccgcgctagaagatgctcccgtaatcctttcttggaagagatgaaggtagcccagttgtggtaaatggatgcccactcgttcctcctgcaggttagggtgtcaagaaacttgcttctccaaaatttagtcgatataagtagaaaaggaacagatcgtttaccccagggcgttccatcggccatgggccatgcaggttgcctgttgtggtgactccctctaggatgattatgagttgaagttgcctggttgtatcgatgctgaatatatggttgcccatgccgaatttggggattttgttggggatgatttacagggttatagccaccatagttaacaggaacagcagaatgagtattccctccaagcgacccacgagaagatgcgtgaaaaaaatggtctgctctgtaactgaaaaaagaaaaagggataattggtagtcattacttattagtaaacaaaatacctttataaagaatatggctgagttaatttttgactcctcccatttatcccaaaataagttcattttttaagtaaccattgcatcagaatttgtgaaagtaaaggataaatgtattaggggtagataaagtggggagtgattgcattgggatttgggatttgataaattgagggtgttctagttttttttttttttggttttgcaatgatatactgtgggatgggtgaaaaattaactttttttgggacggagggagcaactataattgaaacttgaaagactctttaggagcaaagctcaaaataatgtcttgtgaataaaataagggtgataaattttatggttaggctccagcctttgagaaaaaaaaattaagccttaacagatgtagaacattgaatacctttcgcctgctggtaaagggttcgagcccatgaaaatgtggctttggacatttgctgttctggcggatccacttgttggattagctgaatccccgaggtgaagactgctgcttaaatcagctgacagtgaattgtcttcatgcaatagtgactcatcactgcaaggtagaacagcataaacattgatcttcatactacctttacaagaagcaattgaatatgcatttcctcacctaaaataagggtcccaataagcattgtcaagtgtggatgccgctgatgaatcagataaattatcaagagtttgcagacgaggagcaaagtgtgaatgaaatgtttgagaaggcccatgactagaagaagcctccaaggaaaaactaccggaaccaatttgcggtctccaactagaataaccagaacttggtattgaattctgggagtagacaggatgtcctcgaacattggcatcagaatgactaaaaccgacaccatctccatgacgtccttgtccatgctgagatggatattcatgaggtggcattggcaaacccctcctcttgctgtaactggatggagtttttcctaatggggatccatgaatgcctccacttgcaggtgaaccagaaccatgcatcccagtggaattagatgggatttgcatttggtagttaggtggggtaaattgtgatggactggcaccaagagacataggccccgtactcccagggctcaagcgaatccctctatcatgtgagaaacggggtcgcaatcttacgtctggactagactcaatttgtttaaaaccaggacctaatggtgagtaatacatgttgacagcattgccatcaccaaagcttccatagctgctggcatgaccagcattaccaacatagctaccatggctaccaaagcttccataactactcccataagaataaggtatttttggaggatagggattattgggtggtagagacctattaacacttccaacctacaaaattttagaatataggcatgtccgttagagtatggataaaaaaaatgccatgaaaataactcagtagcagcccgagagagtagttatcagttatcacctgaggagataggcctgcggctagccagtgtcctcctccaggattgtgttcaactgcggcagcacgaccaattggctacaccacaaattcaacacagaatagatttaagaaaaaagagccacgtgaacacacaattaatgccccaattaacataagtatataacaaTttttcatcagagcctagaaagctttattgtaaatcacaccaagtaatgcaccacatcaaatgcatgcacgaaagaaactgtcatcatctaaaatatttattgtaaagacgaatcagaaagtgtagcaactggttaggttgatagtcagcactctatatcagtttataacagtaatgtctgtggctctttatcctaaactaggaatatgccacagaaagcaagtagtagcaatgcaaacttatttgattatgataacaaatatgccagtcatatgttattcctaactaagatataatttaactcccacatagaagaatatcatcattaaagatatcaatattttcaatcaaatatgagacctaagcttgagatgagaccatactcacaattttgggagtctcaggtatgggttcatatggaccagtgaaaggttcgcctgttataaatggatgacatgaagcctgaaataagatttaataacaatcaagtccttccgcatgcatatggattccttggaatgaaaaatatgcaagaatacagaataaattgtgttcataggtgcaagctatccaattttattggtactgttagatgaaagattcaccagcttaacctgagcataaaaatagttaaatatgaaaatgaaaaaatgctccttatacttttacagaaatgtgaatgcaatataaccatactacgtcgcacatacctgcaatggcgaccatcgctcattgggatcaaatttcagaagcccctttaggaaatcaaccagtatcacccgctctgccttttctgtctctgaatcaaaatgcaagacctgagaacatatatcaaacttccaagctttattctaacagctctaatttgcagattcaggagagccatacaataataactaatgagaattttataaaacattaagcccaatttcatattccatatcgatcattaaacctgtgcaaaaaggcatccggtttagctcggtttggagtgagtagttttatttccttgattcctgtaggaacacatactttcctttctttttcatttctaggagaataccttattgtaatagttatccttgattgcacaactcaagacaacagcacatcatttttcagagagaaaaaagtacacaggaatataatatggtctaattgaaacaatgtaattacaggtgcaagaatcaaaataaagagtgcacatgatagtggtgcaagtcagaaaaatcaaagagaaatcacaaaaaacaaagaaaacaaacctgtcagttctgaatttttccaagggtaactgcatatgagttggtcaagcctgagttgtgggaagtaccatttcactacctttggcttttcagactccctctgtatttggcatagatagtaagatagtgcttatgatggaattaagaaaaatgatcatgattctataaatgaaattacaagcttaccacttcaatctcctcttcagttaacaatctgtaagaactgccaataccatcatgcacttcgttaccacgataaatacttccaacatgtttaaaaaactttgctgagttcttagcttcccttagcatgtaatctggtggttgacccctacagaaattgaattaaggaaaataaaattacattagtaaaagcattataatatgatgaactccaatataacagtatttctagaaagagatctaaatgcatggaccaacaacattgcactaagaaaaatgcatatgctctacgaagcataaatgactgcatgccaaacagcagagctagaagagaattacaggtaaagcccttacccaagaatttttaccatgcgctggagcacatcatattctgatgctccgggaaataagggaaggcctaaaaatagttcagcaactatgcagccaaatgaccacatgtcaattgcagtattataactgtaaacagttaaggttctagcaagtcactcggaaagaccagagcaatggtacttcactgaaggaaaattcattactcattcgatagatatgaaacagcataccaggaaatgctgattaagacgctaatgggtaatgaaatgaaacaaaattgaatagatatataggatacggatagccaaggataacttctggagatctgtaatagcggctctagcaaaaaggaaggaaagaattgaagtcagactctcaattaactgatattattaaataagcattttagaaatgaagtgtgctaagttccagaaagaaaacctgaatgtatgagtatactgttttaccctccaagcatgctgaaccaaaatcaatcactttcacggctgcatctgttgtaacactgtaaaaattcaaggtgcaactgtcaagctacagcttgcttcgtccaaataaactaaacttatgcagaatccaatgcaatttacctcggagttaacaggatattttcaggcttcaggtcacagtgaattattctagcgcctctcatcacaaccatggcatccaatatctgaaaacataaaacagaaatatcaggcaacaagtattaattatatatataataagtaatacagatagacatctcacctgttttgagaaggcgcgaacaaatttcattttcagtcctctgaagctgttccttttcaagagctcatacctaaaatattggagtttataatgcagtttgagggggtgggggagaaaataatggatgaacatagtagcaaaagaaattctaaagttaacttacaggttttgaccaagcatttcaaatgctatacacaggtgattttggaataggagatagtcaagcatacggacaatgttatactggtcatcaggatcatgtgtttgattcaactgcaagaccacccataattgtaacggtgagtaatgaacttattgcagatagaaagcacaataaagttcccgatgtactaccataccgctctcaataatgaaacctccacgagcgcttgatggtaaaatgcaggctggtttttaataaccttcacagcaacataatcattggtttcagtgtccaagcatttgacaacctgaccgaacgttccttggccaagcatttccttgactacgaacctgagcaccacaataaagaaaaaacgaacatataattcaatgggatgctaaacaatgttcaacattcctgggatttagaacaggggatgtcaaaggaaagacaaacaggacaggattctttaactacttcaaaatttgattgtttgttatacagtcctgatcccccatccaccagtactatccttatgatatcaaacaaacgctttgccatgatgctgaattaactcccatacgagaagggcagtggagactagagaggttatcagcgcttttaattttgtttaaagggttacagtagaaatttggaggcttgaaggaagtgcaaaagacaaaatttagattcctcatcactcggtactaggaacctagatgatttcttcccttgtggtatgaagtaaaaactctggcataccatggctatctgcacgatactcctatattggcatgattggcaatgggataaaatatcatgaaagcttgaagagcatttaaggtatattcaaccactaccagttcatatagtgacttctcaatgtgtggaattttattcagtatcattattacagttttcaactcatgaatttgtgtattgttgatacttgaattaataatctagaccaatcaacctataatttaatggtgcatagtgctctccaaaactggacaaaaagatgaagcaaatcaaacacaaccgaagtagcatcaattctgagaaaagttaaacctccgatttgatgtcctgttgaccaattccaagttgacatacaatatgaggtcccaattcgcattatcaagtccatcattatgagctggggttgaaggattcgtcagaaagatctttgggtttagtgactctgagtacttaaacgcagggttgcatcgtacaaatgtttgaatgatgtctgccgttagtcttgcaacaaactgcatagcaaaggggattcagcttaccatggtacgacaaaacatacagggtttgaggtgcataccatagtcatacgaaaaagaaaatgtaacaaatgaatgatagaataagtcttaaatggaatatatcaaatcaataataataagaacggtggtacgtgttagtgttattcaatgttggaatggttcgtatgcttaacaaaacacttgttaggggaagagctgaagagacaaaaggtgaataccgagtcatacagaacattcttagtatacacaaactaacacaactactgaagatcagtacggtaatggcattctctcctcgatgtatgaacaggcagggcaggaaaaatgtgtggtgacagcaactaatatgacttaactagaattctaacgataaagaatctagagctttcagttggacatccgcgcagagaaccgtatccagctacttcagtgcactaattccctacatttctgagtaacctcattatccgaacggatcattaccatagcaaggaaggaggagaatgagacgtaccggtttcctcttgacgccgtgaagattgcttatacgggtcgcaaccccattgcccgaggacgagggggaggggagggacgcctccggcgaccgccccgaatccccagcaccagcgagacgtcggaacaccgtgcccacgctaggctcccacggcggcgccgccgccgccttctcctccatgtccgccagctattcggcagctcttacagttgctcggggagatctcctaccgcccgccgaccaccacccaccagcaactccgaacccaaccccagtcgcaacgatcacaccatccgcgggagcagccgagcagccgccggaggaatccagctccatcctatacggcggcggcggcggccatccccgacgctccgatcccccggcttagcgcgacggcgatggtcaatccgcgagggtggagaggcagctaaatccgcactggagcacagattccagccgatggatggctggaccagatagggtttattgcctacacgaacgagaaaatttggggataaacaccaacacagagcggtttggactccgatgctcggattccgaattccgcggtggcgccaccgaaattagggatttgggatgggattcgggggggacgaaggaggcgacgcggatcaaaatcccagcccaatcccctccccgatttcctcgatttctcgccgccgtttcctcctccgtttttcctccgcctatatttctcacccttttctctctccCTccccctctctttcctactactaggaaatgatatacttctagattcaattacttgttaatggaataataaatggtgtgataat
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| CDS seq | atggaggagaaggcggcggcggcgccgccgtgggagcctagcgtgggcacggtgttccgacgtctcgctggtgctggggattcggggcggtcgccggaggcgtccctcccctccccctcgtcctcgggcaatggggttgcgacccgtataagcaatcttcacggcgtcaagaggaaaccgatctttctgacgaatccttcaaccccagctcataatgatggacttgataatgcgaattgggacctcatattgtatgtcaacttggaattggtcaacaggacatcaaatcggaggttcgtagtcaaggaaatgcttggccaaggaacgttcggtcaggttgtcaaatgcttggacactgaaaccaatgattatgttgctgtgaaggttattaaaaaccagcctgcattttaccatcaagcgctcgtggaggtttcattattgagagcgttgaatcaaacacatgatcctgatgaccagtataacattgtccgtatgcttgactatctcctattccaaaatcacctgtgtatagcatttgaaatgcttggtcaaaacctgtatgagctcttgaaaaggaacagcttcagaggactgaaaatgaaatttgttcgcgccttctcaaaacagatattggatgccatggttgtgatgagaggcgctagaataattcactgtgacctgaagcctgaaaatatcctgttaactccgagtgttacaacagatgcagccgtgaaagtgattgattttggttcagcatgcttggagggtaaaacagtatactcatacattcagagccgctattacagatctccagaagttatccttggctatccttataatactgcaattgacatgtggtcatttggctgcatagttgctgaactatttttaggccttcccttatttcccggagcatcagaatatgatgtgctccagcgcatggtaaaaattcttgggggtcaaccaccagattacatgctaagggaagctaagaactcagcaaagttttttaaacatgttggaagtatttatcgtggtaacgaagtgcatgatggtattggcagttcttacagattgttaactgaagaggagattgaagtgagggagtctgaaaagccaaaggtagtgaaatggtacttcccacaactcaggcttgaccaactcatatgcagttacccttggaaaaattcagaactgacagagacagaaaaggcagagcgggtgatactggttgatttcctaaaggggcttctgaaatttgatcccaatgagcgatggtcgccattgcaggcttcatgtcatccatttataacaggcgaacctttcactggtccatatgaacccatacctgagactcccaaaattccaattggtcgtgctgccgcagttgaacacaatcctggaggaggacactggctagccgcaggcctatctcctcaggttggaagtgttaataggtctctaccacccaataatccctatcctccaaaaataccttattcttatgggagtagttatggaagctttggtagccatggtagctatgttggtaatgctggtcatgccagcagctatggaagctttggtgatggcaatgctgtcaacatgtattactcaccattaggtcctggttttaaacaaattgagtctagtccagacgtaagattgcgaccccgtttctcacatgatagagggattcgcttgagccctgggagtacggggcctatgtctcttggtgccagtccatcacaatttaccccacctaactaccaaatgcaaatcccatctaattccactgggatgcatggttctggttcacctgcaagtggaggcattcatggatccccattaggaaaaactccatccagttacagcaagaggaggggtttgccaatgccacctcatgaatatccatctcagcatggacaaggacgtcatggagatggtgtcggttttagtcattctgatgccaatgttcgaggacatcctgtctactcccagaattcaataccaagttctggttattctagttggagaccgcaaattggttccggtagtttttccttggaggcttcttctagtcatgggccttctcaaacatttcattcacactttgctcctcgtctgcaaactcttgataatttatctgattcatcagcggcatccacacttgacaatgcttattgggacccttattttagtgatgagtcactattgcatgaagacaattcactgtcagctgatttaagcagcagtcttcacctcggggattcagctaatccaacaagtggatccgccagaacagcaaatgtccaaagccacattttcatgggctcgaaccctttaccagcaggcgaaaggtattcaatgttctacatctgttaa
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| Protein seq | MEEKAAAAPPWEPSVGTVFRRLAGAGDSGRSPEASLPSPSSSGNGVATRISNLHGVKRKPIFLTNPSTPAHNDGLDNANWDLILYVNLELVNRTSNRRFVVKEMLGQGTFGQVVKCLDTETNDYVAVKVIKNQPAFYHQALVEVSLLRALNQTHDPDDQYNIVRMLDYLLFQNHLCIAFEMLGQNLYELLKRNSFRGLKMKFVRAFSKQILDAMVVMRGARIIHCDLKPENILLTPSVTTDAAVKVIDFGSACLEGKTVYSYIQSRYYRSPEVILGYPYNTAIDMWSFGCIVAELFLGLPLFPGASEYDVLQRMVKILGGQPPDYMLREAKNSAKFFKHVGSIYRGNEVHDGIGSSYRLLTEEEIEVRESEKPKVVKWYFPQLRLDQLICSYPWKNSELTETEKAERVILVDFLKGLLKFDPNERWSPLQASCHPFITGEPFTGPYEPIPETPKIPIGRAAAVEHNPGGGHWLAAGLSPQVGSVNRSLPPNNPYPPKIPYSYGSSYGSFGSHGSYVGNAGHASSYGSFGDGNAVNMYYSPLGPGFKQIESSPDVRLRPRFSHDRGIRLSPGSTGPMSLGASPSQFTPPNYQMQIPSNSTGMHGSGSPASGGIHGSPLGKTPSSYSKRRGLPMPPHEYPSQHGQGRHGDGVGFSHSDANVRGHPVYSQNSIPSSGYSSWRPQIGSGSFSLEASSSHGPSQTFHSHFAPRLQTLDNLSDSSAASTLDNAYWDPYFSDESLLHEDNSLSADLSSSLHLGDSANPTSGSARTANVQSHIFMGSNPLPAGERYSMFYIC |
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| Function | Dual specificity protein kinase YAK1 homolog [UniProtKB/Swiss-Prot:Q8RWH3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_04g0025600 | OsLiXu_04g0025600.01 | Chr04 | 32578952 | 32585603 | - | NAM | ||
| CDS seq | atggaggagaaggcggcggcggcgccgccgtgggagcctagcgtgggcacggtgttccgacgtctcgctggtgctggggattcggggcggtcgccggaggcgtccctcccctccccctcgtcctcgggcaatggggttgcgacccgtataagcaatcttcacggcgtcaagaggaaaccgatctttctgacgaatccttcaaccccagctcataatgatggacttgataatgcgaattgggacctcatattgtatgtcaacttggaattggtcaacaggacatcaaatcggaggttcgtagtcaaggaaatgcttggccaaggaacgttcggtcaggttgtcaaatgcttggacactgaaaccaatgattatgttgctgtgaaggttattaaaaaccagcctgcattttaccatcaagcgctcgtggaggtttcattattgagagcgttgaatcaaacacatgatcctgatgaccagtataacattgtccgtatgcttgactatctcctattccaaaatcacctgtgtatagcatttgaaatgcttggtcaaaacctgtatgagctcttgaaaaggaacagcttcagaggactgaaaatgaaatttgttcgcgccttctcaaaacagatattggatgccatggttgtgatgagaggcgctagaataattcactgtgacctgaagcctgaaaatatcctgttaactccgagtgttacaacagatgcagccgtgaaagtgattgattttggttcagcatgcttggagggtaaaacagtatactcatacattcagagccgctattacagatctccagaagttatccttggctatccttataatactgcaattgacatgtggtcatttggctgcatagttgctgaactatttttaggccttcccttatttcccggagcatcagaatatgatgtgctccagcgcatggtaaaaattcttgggggtcaaccaccagattacatgctaagggaagctaagaactcagcaaagttttttaaacatgttggaagtatttatcgtggtaacgaagtgcatgatggtattggcagttcttacagattgttaactgaagaggagattgaagtgagggagtctgaaaagccaaaggtagtgaaatggtacttcccacaactcaggcttgaccaactcatatgcagttacccttggaaaaattcagaactgacagagacagaaaaggcagagcgggtgatactggttgatttcctaaaggggcttctgaaatttgatcccaatgagcgatggtcgccattgcaggcttcatgtcatccatttataacaggcgaacctttcactggtccatatgaacccatacctgagactcccaaaattccaattggtcgtgctgccgcagttgaacacaatcctggaggaggacactggctagccgcaggcctatctcctcaggttggaagtgttaataggtctctaccacccaataatccctatcctccaaaaataccttattcttatgggagtagttatggaagctttggtagccatggtagctatgttggtaatgctggtcatgccagcagctatggaagctttggtgatggcaatgctgtcaacatgtattactcaccattaggtcctggttttaaacaaattgagtctagtccagacgtaagattgcgaccccgtttctcacatgatagagggattcgcttgagccctgggagtacggggcctatgtctcttggtgccagtccatcacaatttaccccacctaactaccaaatgcaaatcccatctaattccactgggatgcatggttctggttcacctgcaagtggaggcattcatggatccccattaggaaaaactccatccagttacagcaagaggaggggtttgccaatgccacctcatgaatatccatctcagcatggacaaggacgtcatggagatggtgtcggttttagtcattctgatgccaatgttcgaggacatcctgtctactcccagaattcaataccaagttctggttattctagttggagaccgcaaattggttccggtagtttttccttggaggcttcttctagtcatgggccttctcaaacatttcattcacactttgctcctcgtctgcaaactcttgataatttatctgattcatcagcggcatccacacttgacaatgcttattgggacccttattttagtgatgagtcactattgcatgaagacaattcactgtcagctgatttaagcagcagtcttcacctcggggattcagctaatccaacaagtggatccgccagaacagcaaatgtccaaagccacattttcatgggctcgaaccctttaccagcaggcgaaaggtattcaatgttctacatctgttaa
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| Protein seq | MEEKAAAAPPWEPSVGTVFRRLAGAGDSGRSPEASLPSPSSSGNGVATRISNLHGVKRKPIFLTNPSTPAHNDGLDNANWDLILYVNLELVNRTSNRRFVVKEMLGQGTFGQVVKCLDTETNDYVAVKVIKNQPAFYHQALVEVSLLRALNQTHDPDDQYNIVRMLDYLLFQNHLCIAFEMLGQNLYELLKRNSFRGLKMKFVRAFSKQILDAMVVMRGARIIHCDLKPENILLTPSVTTDAAVKVIDFGSACLEGKTVYSYIQSRYYRSPEVILGYPYNTAIDMWSFGCIVAELFLGLPLFPGASEYDVLQRMVKILGGQPPDYMLREAKNSAKFFKHVGSIYRGNEVHDGIGSSYRLLTEEEIEVRESEKPKVVKWYFPQLRLDQLICSYPWKNSELTETEKAERVILVDFLKGLLKFDPNERWSPLQASCHPFITGEPFTGPYEPIPETPKIPIGRAAAVEHNPGGGHWLAAGLSPQVGSVNRSLPPNNPYPPKIPYSYGSSYGSFGSHGSYVGNAGHASSYGSFGDGNAVNMYYSPLGPGFKQIESSPDVRLRPRFSHDRGIRLSPGSTGPMSLGASPSQFTPPNYQMQIPSNSTGMHGSGSPASGGIHGSPLGKTPSSYSKRRGLPMPPHEYPSQHGQGRHGDGVGFSHSDANVRGHPVYSQNSIPSSGYSSWRPQIGSGSFSLEASSSHGPSQTFHSHFAPRLQTLDNLSDSSAASTLDNAYWDPYFSDESLLHEDNSLSADLSSSLHLGDSANPTSGSARTANVQSHIFMGSNPLPAGERYSMFYIC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_04g0025600 | OsLiXu_04g0025600.02 | Chr04 | 32578952 | 32584965 | - | NAM | ||
| CDS seq | atggaggagaaggcggcggcggcgccgccgtgggagcctagcgtgggcacggtgttccgacgtctcgctggtgctggggattcggggcggtcgccggaggcgtccctcccctccccctcgtcctcgggcaatggggttgcgacccgtataagcaatcttcacggcgtcaagaggaaaccgatctttctgacgaatccttcaaccccagctcataatgatggacttgataatgcgaattgggacctcatattgtatgtcaacttggaattggtcaacaggacatcaaatcggaggttcgtagtcaaggaaatgcttggccaaggaacgttcggtcaggttgtcaaatgcttggacactgaaaccaatgattatgttgctgtgaaggttattaaaaaccagcctgcattttaccatcaagcgctcgtggaggtttcattattgagagcgttgaatcaaacacatgatcctgatgaccagtataacattgtccgtatgcttgactatctcctattccaaaatcacctgtgtatagcatttgaaatgcttggtcaaaacctgtatgagctcttgaaaaggaacagcttcagaggactgaaaatgaaatttgttcgcgccttctcaaaacagatattggatgccatggttgtgatgagaggcgctagaataattcactgtgacctgaagcctgaaaatatcctgttaactccgagtgttacaacagatgcagccgtgaaagtgattgattttggttcagcatgcttggagggtaaaacagtatactcatacattcagagccgctattacagatctccagaagttatccttggctatccgggtcaaccaccagattacatgctaagggaagctaagaactcagcaaagttttttaaacatgttggaagtatttatcgtggtaacgaagtgcatgatggtattggcagttcttacagattgttaactgaagaggagattgaagtgagggagtctgaaaagccaaaggtagtgaaatggtacttcccacaactcaggcttgaccaactcatatgcagttacccttggaaaaattcagaactgacagagacagaaaaggcagagcgggtgatactggttgatttcctaaaggggcttctgaaatttgatcccaatgagcgatggtcgccattgcaggcttcatgtcatccatttataacaggcgaacctttcactggtccatatgaacccatacctgagactcccaaaattccaattggtcgtgctgccgcagttgaacacaatcctggaggaggacactggctagccgcaggcctatctcctcaggttggaagtgttaataggtctctaccacccaataatccctatcctccaaaaataccttattcttatgggagtagttatggaagctttggtagccatggtagctatgttggtaatgctggtcatgccagcagctatggaagctttggtgatggcaatgctgtcaacatgtattactcaccattaggtcctggttttaaacaaattgagtctagtccagacgtaagattgcgaccccgtttctcacatgatagagggattcgcttgagccctgggagtacggggcctatgtctcttggtgccagtccatcacaatttaccccacctaactaccaaatgcaaatcccatctaattccactgggatgcatggttctggttcacctgcaagtggaggcattcatggatccccattaggaaaaactccatccagttacagcaagaggaggggtttgccaatgccacctcatgaatatccatctcagcatggacaaggacgtcatggagatggtgtcggttttagtcattctgatgccaatgttcgaggacatcctgtctactcccagaattcaataccaagttctggttattctagttggagaccgcaaattggttccggtagtttttccttggaggcttcttctagtcatgggccttctcaaacatttcattcacactttgctcctcgtctgcaaactcttgataatttatctgattcatcagcggcatccacacttgacaatgcttattgggacccttattttagtgatgagtcactattgcatgaagacaattcactgtcagctgatttaagcagcagtcttcacctcggggattcagctaatccaacaagtggatccgccagaacagcaaatgtccaaagccacattttcatgggctcgaaccctttaccagcaggcgaaaggtattcaatgttctacatctgttaa
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| Protein seq | MEEKAAAAPPWEPSVGTVFRRLAGAGDSGRSPEASLPSPSSSGNGVATRISNLHGVKRKPIFLTNPSTPAHNDGLDNANWDLILYVNLELVNRTSNRRFVVKEMLGQGTFGQVVKCLDTETNDYVAVKVIKNQPAFYHQALVEVSLLRALNQTHDPDDQYNIVRMLDYLLFQNHLCIAFEMLGQNLYELLKRNSFRGLKMKFVRAFSKQILDAMVVMRGARIIHCDLKPENILLTPSVTTDAAVKVIDFGSACLEGKTVYSYIQSRYYRSPEVILGYPGQPPDYMLREAKNSAKFFKHVGSIYRGNEVHDGIGSSYRLLTEEEIEVRESEKPKVVKWYFPQLRLDQLICSYPWKNSELTETEKAERVILVDFLKGLLKFDPNERWSPLQASCHPFITGEPFTGPYEPIPETPKIPIGRAAAVEHNPGGGHWLAAGLSPQVGSVNRSLPPNNPYPPKIPYSYGSSYGSFGSHGSYVGNAGHASSYGSFGDGNAVNMYYSPLGPGFKQIESSPDVRLRPRFSHDRGIRLSPGSTGPMSLGASPSQFTPPNYQMQIPSNSTGMHGSGSPASGGIHGSPLGKTPSSYSKRRGLPMPPHEYPSQHGQGRHGDGVGFSHSDANVRGHPVYSQNSIPSSGYSSWRPQIGSGSFSLEASSSHGPSQTFHSHFAPRLQTLDNLSDSSAASTLDNAYWDPYFSDESLLHEDNSLSADLSSSLHLGDSANPTSGSARTANVQSHIFMGSNPLPAGERYSMFYIC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_04g0025600 | OsLiXu_04g0025600.03 | Chr04 | 32577918 | 32585502 | - | IsoSeq | ||
| CDS seq | atgaatatccatctcagcatggacaaggacgtcatggagatggtgtcggttttagtcattctgatgccaatgttcgaggacatcctgtctactcccagaattcaataccaagttctggttattctagttggagaccgcaaattggttccggtagtttttccttggaggcttcttctagtcatgggccttctcaaacatttcattcacactttgctcctcgtctgcaaactcttgataatttatctgattcatcagcggcatccacacttgacaatgcttattgggacccttattttagtgatgagtcactattgcatgaagacaattcactgtcagctg
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| Protein seq | MNIHLSMDKDVMEMVSVLVILMPMFEDILSTPRIQYQVLVILVGDRKLVPVVFPWRLLLVMGLLKHFIHTLLLVCKLLIIYLIHQRHPHLTMLIGTLILVMSHYCMKTIHCQL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr04 | 32584157 | 32584786 | - | OsLiXu_04g0025600.03 | OsLiXu_04g0025600.02,OsLiXu_04g0025600.01,OsLiXu_04g0025600.03 | All |
| SE | Chr04 | 32581836 | 32582338 | - | OsLiXu_04g0025600.03,OsLiXu_04g0025600.01 | OsLiXu_04g0025600.02,OsLiXu_04g0025600.01,OsLiXu_04g0025600.03 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.214780 | 1.829334 | 2.590473 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0602800 | RBH | 6.061881 | 3.261614 | 10.421660 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g51370 | RBH | 2.219499 | 2.183425 | 2.337990 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0602800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0025550 | RBH | 1.509311 | 33.557686 | 12.127735 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0026320 | RBH | 0.986801 | 5.170310 | 5.497566 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0026070 | RBH | 3.176217 | 29.551376 | 14.807598 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0025770 | RBH | 0.485602 | 0.904481 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0026030 | RBH | 9.364347 | 38.016792 | 33.546432 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0480100 | RBH | 9.8777305 | 21.8447905 | 13.51486 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0024780 | RBH | 0.715509 | 1.520231 | 2.379693 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0484000 | RBH | 10.486466 | 20.3362495 | 19.418288 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0025260 | RBH | 0.636618 | 0.632942 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0025080 | RBH | 1.242951 | 23.439133 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0025150 | RBH | 12.360807 | 37.162521 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0030140 | RBH | 1.671715 | 4.725190 | 4.294763 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0025760 | RBH | 0.809167 | 24.780418 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G025000 | RBH | 1.432534 | 7.386382 | 4.893812 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0024890 | RBH | 3.697283 | 42.303375 | 13.787171 |
