Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_04g0017390 | OGI:04073030 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr04:25888603-25895848 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcaggcgggggcggccggccagttccacacgctgccaccgctttgccgaacccgcgcgccgatcgttcgtgcacgcgtctcgcatgcatcctccacaaactccggccgtattctgcacgttgatgttggcctctggcggtccaacaacagcgctgccccaagccatccagatacggccatacgggaaaaccaatggcgatcggcgaccgggacgaccatccgtttatctgtaccttgaaggcgacccgtgcgcacgacgctcgccgccgcttcctgtactgtctttacccaatcctgcaccggaaacaggagagagagagagagagctagtaggaaccggggcaacttcacgacggcttccatatgctccccgttctagctggccctctctgtaatgtactaccagtagtactgtcatttctcaccaggacggctacacagctactgcgtttatctgagctggaaataggaaattcgggaacccaccgagcttaaatttttacagtatcacttttgataactagatatatactccatagtaatgatactccctaagttacatgcctgcatcgtcaatgagcatctctgttactcttgctcttggtggcgatgagcacgagagggttcttcttgcgcaccgccagcccgttctcctcctccacgtccacctcgcgccccggcagcgcgcgccagtcgaagcagaagaggaggttggccagcagcagctccgccgccgccgccgcgaagtgcacgccggggcagctcctccgcccgatcccgaacggcaccagcgcgaacccgtcgtgctcgtgctgctgctcgccgtcggcgtcgtcgcggtggcgctcgggcacgaaccgctccgcgtccgggccccagacgccggggtccgtgtgtatcgccatcgcgttgatgacgacgcgcgtcctggccggtatctcgacgccatgcgccgtgcggaacggctccgtcgtctcccgttgcaccagcggcgacgccgggtggagccggagtgtctccttgatgaccagccgcaggtagtggagctccgggaggtcggcttcccgcaccatggcgccgtccttgtcgccgccgccgccggcggcgatgacgcggcgcacctcgtgctgcgccttggcgagcacgtccgggttcctgacgagctccgtcatcgcccactgcaccgtcaccgccgacgtgtcgctcccggcaatgaacatatcctgcaagaccacacaattcggtttcgatcgatcaacatgtccaggaaaactgggaagcaccagcggtgcggtgttggagtcctcggtgcatgactccagttcatccactcaagttcgaatcctaatgttcacacgaattttacacagacgtagagggcaaattgttttaaacactcgggtagacatccacccgtttcttgtatgtcatttaaagggttatgaaaaattttcaaaagaaataacatgataggttaatatgtaatatatcatctcacaaatatacaagttcaaatttggcttctacaagttataataaaaattaacaaatttaactgtgaatatacgtatacaagttagagtttaatttgttatttttgttacaactcgtagtagtcgaatttgaatttacatgtttgtgagatgatatattacatgttaacctatcttataaTtttttttggaattttttcataatcatttaggcggcatgcaagaaacgggtggacgtccacccgagagaatagggcagtcccaacccatagtgtctataagtagtgtctatgatgtcatgtcaataagacatcacaatagaaactatactctacaacccatagtttcttaaagtgggccattaataaatacatcatctctcttctctactaatcatatttattcttcatctattatgaagacatttttctctcccaatgcaaaacttgatagtgtctattgtatagattctcgtgttgaagttgtgtcttgcatgagacccagttttttcctctcttcactctctctcttaattaatatagtgccacataagcaaaaagttttacatgacaatgtagttaatgctatagacaccataggtttcgataaaaaattagtgagatgtgaaatgtgtagctagtttccgtctacgagttaggagacatatccgcgcggtgtgagagtggtgcgcgcgcgcatatcgcgtcttccctatgtccaggaaaacgtatatcacagcgtgctatgctcttgtccaggtacgtaatatgtacacgtaccgtgagaatgcctttgatgtgggtgcggctgccgaacatgctccggtgagccggatcgccgtggaggcggaggagcacgtcgaccaagtcgtcttcctcgtcggatgcatgcttgcgcttgttgatgtggtcgtcgatgacgcgctcgtagaatgcgtcgagctggcggaaccgccgctccagccgccgcctcatgccgctgagggtgtccacccaccggagccacggcacgtagtcggcgacccagagaccaccaagaagagactgggtctcgtcgaggacagccttgacgtccatgctctcgtcgccgtcgccgtcgccgtcgccgaaggcgacgcgccgcacgatcctgctgctggtggcagcgaccatgtcgctcaggttgacgggggaggcgccggcggccgccacggccgcgatgagcgcggcggcctcacgctccctggcgtcgcggagctcgcgcacccgcggcgccccgaggagcgccgacatgcacgcgcggcgcgcggcgcgccagtacgcgccgtcgggcgcgaaggagatgttcttctggccgtaggagagccttgtggccgcgtacagcgccgggcgccccgacagcgcgcggtcgttgttccggaacagcgcccgcgccgcgtcggcggtggagacgacgagcgtcggcacggagccgaggcggagcagcatgagcggcgccgcatgcctggcggcgagcgcggcgagggagcggtgcgggagcgcgccgacctggtggaggttgccgatgagagggaggcccttcgggcgtggcagcgacggtgaggcggcgcgcttcttggacgacggcgcgagaagctgcttgaagaggagaatggtggcgaggaggaggaggcatgacgcaaggaactcaggagcttggagagacgccatggacattgctgtcttggttgttctctagcttgtctctagggcggctgagtttatctatctatatatatgtcatgtcagtaggagatatcttaggacatcaacaatatttccttaccaagtagtaagtaaggttggaccaagcaggtaattgttatttaagatctcacaatgtataggaggtaataaggtgggtcccacatatatataaatataaatataaagacgtagtgacgacgacgacgccgtcaccagcagcagccgccgctgcccacggccgtgctggcccacgtcccccttgaggaagggaccgacttcgccgctgccgtcgcacgcaagggcttcggctgctacgtcctcgtcgtcctcttccgctcccgccatcctcgccaaaagccggaatggtgccgcccgagtcgtcacgcgcaccgcccattctccccgtcggccgccgctcgtcagtcgtcctccccattggtcgccgcccgtcccgacaccccttctccccgccggtcgccgcccgtcacgccatcctcctcgccggcagtcgcccatctctttaccgcctgttacgccgtccaccccaccgaccgctgctcgtctcggcgccttggccgcatctactcctcctccggcggccaccgccgcacgccgccccttctccccggtggccaccgcctgtcggccgtcgcgcctggtagaggagaagagagaggagagggggagagagacgaagagaggggagatggggatcgagagaggaggaagaagagggcaatgagattgacatgtggggcccacatggcccacctttattaattattgtttttatgtaactgacctatgggtctcacgggtattgtttttttctcaaatcgaattgtcacttcagcgccacatcagtgccacgtagcatggagacctagttaaactagccacgtagacaccacgtcagttaaaaccgctatccaaaccgtcttaggaccttatgtgctggTttttgtaagtttggagacgggtagtacctggttttagggtttagggatgaaaatcggactgggcgacgaatagagggacttaaagtgatcttattcctttgccgaacccgcgcgtcgatcgtgcgtgcacacgcgtctcgcaatcctccacaaactccggccgtattctgcacgttgatgttggcctctggcggtccaacaccagcactggcccaagccatccagatacgggtacgggccggttgcgcctgcgtttcctacctgatcgcgacgggaaaaccaatggcgatcggcgaccgggacgaccatccgtttatctgtaccttcaaggcggcccgtgcgcacgacgctcgccgccgcttcctgtactgtctttacccaatcctgcaccggaaacaggagagagagagagagagagctagtaggaaccggggcaacttcacgacggcttccatatgctccccgttctagttgcttgtaccagtagtactttcatttctcaccaggaaggctacaccctcagtcccaaaaaagaattaaactctagggatggatgaggactgccgtttttgtgaaagtttggggacgcaaacgcaacccattggctcttggcaaatgcaacagtcagtgtcatcatctttctgagggcgacatacgtacccatccgatccggaacgaccgagaccgttccagaatccagagtccgtggcttctgccttatgtgaacttgtggtatctcagtacggatacgtctgagctccgtcttgatgggagcagcattaataaactttcttactgatgattagtgcttagagcttcttcagtttttgctgaaatcaacctaaccgatatttagcattaccaaattttggcacattttaatgttgttaaattttcatagcattagttgcatttagtttgtagccctatcaaaatttggtagtgtttatataagaagaaacttttgaaatgctaaattttggtagaacagcaatgcaataatttgtttagtttgttagaatgtggtaacaaagtgaacatatccttataatactatcaagagaaattttataaccttgagaaagtatctcgagataataataccttttacacatgttgtatgtaacttctgataaaattaccctaccagcaaggttacatgtctgcgtcgtcaatggccacctgtgttcctcttgctcttggtggcgatgagcacgagagggttcttcttgtgcaccgccagcccgttctcctcctccacgtccacctcgcgccccggcggcgcgcgccagtcgaagcagaagaggaggttggccagcagcagctccaccgccgccgccgcgaagtgcacgccggggcatctcctccgcccgatcccgaacggcaccagcgcgaacccgtcgtgctgctgcgcgcagccgtcggcgtcgtcgcggtggcgctcgggcacgaaccgctccgcgtccgggccccagacgccggggtccgtgtgtatcgccatcgcgttgacgacgacgcgcgtcctggccggtatctcgacgccgtgcgccgtgcggaacggctccgtcgtctcccgtggaaccagcagcggcgccgccgggtggagccgcagtgtctccttgatgaccaggcgaaggtagtggagctccgggaggtcggcttcccgcaccttgtcgccggcggcgacgacgcggcgcacctcgtgctgcgccttggcgagcacgtccgggttcctgacgagctccgtcatcgcccactgcaccgtcaccgccgacgtgtcgctcccggcgatgaacatgtcctgcaagatcacacatttcggtttcgatcgatcaaaatgtccaggaaaacggggaagcaccagcggtgtggtggttgagtcgtgagtacatgactccagtctatccactaaagtttaaattctgatgctcaaattttacacgcacacagagctttcgaccgaccgaaatttagtgagataagaaatgtgccgctaatttctatctcagtgtatgtgttgggagacgtattcgtgtggggtgtgagtgtggtgcgcgcatatgcgtcttccaaaacatgtccaggaaaacgtatatcacagcgtgctatgctcttcttgttcatgtacgtaatatgtaccgtgagaatgcctttgatgtggctgcggctgccgaacgtgctccggtgagccggatcgccgtggaggcggaggagcacgtcgaccaagtcgtcttcttcgtcggatgcatgcttgcgcttgttgaggtggtcgtcgatgacgcgctcgtagagcgcgtcgagctggcggaaccgccgctccagccgccacctcttgccgctgagggtgtccacccaccggagccacggcacgtagtcggtgacccagagaccaccaagaagagcctgggtctcgtcgaggacagccttgacgtccatgctctcgtcgccgtcgccgtcgccgaaggcgacgcgccgcacgatcctgcggctggtggcggcgaccatgtcgctcaggttgacgggggaggcgccggcggccgccacggccgcgacgagcgcggcggcctcgcgctcccgggcgtcgcggagcccgcgcacccgcggcgggccgaggagctccgacatgcacgcgcggcgcgcggcgcgccagtacgcgccgtcgggcgcgaaggagatgctcttctggccgtaggagagcctggtggccgcgtacagcgccgggcgccccgacagcgcgcggtcgttgtcccggaacagcgcccgcgccgcgtcggcggtggagacgacgagcgtcggcacggagccgaggcggagcagcatgagcggcgccgcatgcctggcggcgagcgcggcgagggagcggtgcgggagcgcgccgacctggtggaggttgccgatgagagggaggcctctcgggcgtggtagcgacggcgaggcggcgcgctgcttggacgacggcgcgagaagctgcttgaagaagagaatggtggcgaggaggaggcaggacgcaaggaactcaggagcttggagagacgtcatggacattgctgtctttgctgttctctagctt
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| CDS seq | atgtccatgacgtctctccaagctcctgagttccttgcgtcctgcctcctcctcgccaccattctcttcttcaagcagcttctcgcgccgtcgtccaagcagcgcgccgcctcgccgtcgctaccacgcccgagaggcctccctctcatcggcaacctccaccaggtcggcgcgctcccgcaccgctccctcgccgcgctcgccgccaggcatgcggcgccgctcatgctgctccgcctcggctccgtgccgacgctcgtcgtctccaccgccgacgcggcgcgggcgctgttccgggacaacgaccgcgcgctgtcggggcgcccggcgctgtacgcggccaccaggctctcctacggccagaagagcatctccttcgcgcccgacggcgcgtactggcgcgccgcgcgccgcgcgtgcatgtcggagctcctcggcccgccgcgggtgcgcgggctccgcgacgcccgggagcgcgaggccgccgcgctcgtcgcggccgtggcggccgccggcgcctcccccgtcaacctgagcgacatggtcgccgccaccagccgcaggatcgtgcggcgcgtcgccttcggcgacggcgacggcgacgagagcatggacgtcaaggctgtcctcgacgagacccaggctcttcttggtggtctctgggtcaccgactacgtgccgtggctccggtgggtggacaccctcagcggcaagaggtggcggctggagcggcggttccgccagctcgacgcgctctacgagcgcgtcatcgacgaccacctcaacaagcgcaagcatgcatccgacgaagaagacgacttggtcgacgtgctcctccgcctccacggcgatccggctcaccggagcacgttcggcagccgcagccacatcaaaggcattctcacgtgggcgatgacggagctcgtcaggaacccggacgtgctcgccaaggcgcagcacgaggtgcgccgcgtcgtcgccgccggcgacaaggtgcgggaagccgacctcccggagctccactaccttcgcctggtcatcaaggagacactgcggctccacccggcggcgccgctgctggttccacgggagacgacggagccgttccgcacggcgcacggcgtcgagataccggccaggacgcgcgtcgtcgtcaacgcgatggcgatacacacggaccccggcgtctggggcccggacgcggagcggttcgtgcccgagcgccaccgcgacgacgccgacggctgcgcgcagcagcacgacgggttcgcgctggtgccgttcgggatcgggcggaggagatgccccggcgtgcacttcgcggcggcggcggtggagctgctgctggccaacctcctcttctgcttcgactggcgcgcgccgccggggcgcgaggtggacgtggaggaggagaacgggctggcggtgcacaagaagaaccctctcgtgctcatcgccaccaagagcaagaggaacacagtacaggaagcggcggcgagcgtcgtgcgcacgggccgccttgaaggtacagataaacggatggtcgtcccggtcgccgatcgccattggttttcccgtcgcgatcaggaaacgcaggcgcaaccggcccgtacccgtatctggatggcttgggccagtgctgcaatgtccatggcgtctctccaagctcctgagttccttgcgtcatgcctcctcctcctcgccaccattctcctcttcaagcagcttctcgcgccgtcgtccaagaagcgcgccgcctcaccgtcgctgccacgcccgaagggcctccctctcatcggcaacctccaccaggtcggcgcgctcccgcaccgctccctcgccgcgctcgccgccaggcatgcggcgccgctcatgctgctccgcctcggctccgtgccgacgctcgtcgtctccaccgccgacgcggcgcgggcgctgttccggaacaacgaccgcgcgctgtcggggcgcccggcgctgtacgcggccacaaggctctcctacggccagaagaacatctccttcgcgcccgacggcgcgtactggcgcgccgcgcgccgcgcgtgcatgtcggcgctcctcggggcgccgcgggtgcgcgagctccgcgacgccagggagcgtgaggccgccgcgctcatcgcggccgtggcggccgccggcgcctcccccgtcaacctgagcgacatggtcgctgccaccagcagcaggatcgtgcggcgcgtcgccttcggcgacggcgacggcgacggcgacgagagcatggacgtcaaggctgtcctcgacgagacccagtctcttcttggtggtctctgggtcgccgactacgtgccgtggctccggtgggtggacaccctcagcggcatgaggcggcggctggagcggcggttccgccagctcgacgcattctacgagcgcgtcatcgacgaccacatcaacaagcgcaagcatgcatccgacgaggaagacgacttggtcgacgtgctcctccgcctccacggcgatccggctcaccggagcatgttcggcagccgcacccacatcaaaggcattctcacggatatgttcattgccgggagcgacacgtcggcggtgacggtgcagtgggcgatgacggagctcgtcaggaacccggacgtgctcgccaaggcgcagcacgaggtgcgccgcgtcatcgccgccggcggcggcggcgacaaggacggcgccatggtgcgggaagccgacctcccggagctccactacctgcggctggtcatcaaggagacactccggctccacccggcgtcgccgctggtgcaacgggagacgacggagccgttccgcacggcgcatggcgtcgagataccggccaggacgcgcgtcgtcatcaacgcgatggcgatacacacggaccccggcgtctggggcccggacgcggagcggttcgtgcccgagcgccaccgcgacgacgccgacggcgagcagcagcacgagcacgacgggttcgcgctggtgccgttcgggatcgggcggaggagctgccccggcgtgcacttcgcggcggcggcggcggagctgctgctggccaacctcctcttctgcttcgactggcgcgcgctgccggggcgcgaggtggacgtggaggaggagaacgggctggcggattgggtaaagacagtacaggaagcggcggcgagcgtcgtgcgcacgggtcgccttcaaggtacagataaacggatggtcgtcccggtcgccgatcgccattggttttcccgtatggccgtatctggatggcttggggcagcgctgttgttggaccgccagaggccaacatcaacgtgcagaatacggccggagtttgtggaggatgcatgcgagacgcgtgcacgaacgatcggcgcgcgggttcggcaaagcggtggcagcgtgtggaactggccggccgcccccgcctga
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| Protein seq | MSMTSLQAPEFLASCLLLATILFFKQLLAPSSKQRAASPSLPRPRGLPLIGNLHQVGALPHRSLAALAARHAAPLMLLRLGSVPTLVVSTADAARALFRDNDRALSGRPALYAATRLSYGQKSISFAPDGAYWRAARRACMSELLGPPRVRGLRDAREREAAALVAAVAAAGASPVNLSDMVAATSRRIVRRVAFGDGDGDESMDVKAVLDETQALLGGLWVTDYVPWLRWVDTLSGKRWRLERRFRQLDALYERVIDDHLNKRKHASDEEDDLVDVLLRLHGDPAHRSTFGSRSHIKGILTWAMTELVRNPDVLAKAQHEVRRVVAAGDKVREADLPELHYLRLVIKETLRLHPAAPLLVPRETTEPFRTAHGVEIPARTRVVVNAMAIHTDPGVWGPDAERFVPERHRDDADGCAQQHDGFALVPFGIGRRRCPGVHFAAAAVELLLANLLFCFDWRAPPGREVDVEEENGLAVHKKNPLVLIATKSKRNTVQEAAASVVRTGRLEGTDKRMVVPVADRHWFSRRDQETQAQPARTRIWMAWASAAMSMASLQAPEFLASCLLLLATILLFKQLLAPSSKKRAASPSLPRPKGLPLIGNLHQVGALPHRSLAALAARHAAPLMLLRLGSVPTLVVSTADAARALFRNNDRALSGRPALYAATRLSYGQKNISFAPDGAYWRAARRACMSALLGAPRVRELRDAREREAAALIAAVAAAGASPVNLSDMVAATSSRIVRRVAFGDGDGDGDESMDVKAVLDETQSLLGGLWVADYVPWLRWVDTLSGMRRRLERRFRQLDAFYERVIDDHINKRKHASDEEDDLVDVLLRLHGDPAHRSMFGSRTHIKGILTDMFIAGSDTSAVTVQWAMTELVRNPDVLAKAQHEVRRVIAAGGGGDKDGAMVREADLPELHYLRLVIKETLRLHPASPLVQRETTEPFRTAHGVEIPARTRVVINAMAIHTDPGVWGPDAERFVPERHRDDADGEQQHEHDGFALVPFGIGRRSCPGVHFAAAAAELLLANLLFCFDWRALPGREVDVEEENGLADWVKTVQEAAASVVRTGRLQGTDKRMVVPVADRHWFSRMAVSGWLGAALLLDRQRPTSTCRIRPEFVEDACETRARTIGARVRQSGGSVWNWPAAPA |
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| Function | Cytochrome P450 71A9 [UniProtKB/Swiss-Prot:O81970] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_04g0017390 | OsLiXu_04g0017390.01 | Chr04 | 25888603 | 25895823 | - | NAM | ||
| CDS seq | atgtccatgacgtctctccaagctcctgagttccttgcgtcctgcctcctcctcgccaccattctcttcttcaagcagcttctcgcgccgtcgtccaagcagcgcgccgcctcgccgtcgctaccacgcccgagaggcctccctctcatcggcaacctccaccaggtcggcgcgctcccgcaccgctccctcgccgcgctcgccgccaggcatgcggcgccgctcatgctgctccgcctcggctccgtgccgacgctcgtcgtctccaccgccgacgcggcgcgggcgctgttccgggacaacgaccgcgcgctgtcggggcgcccggcgctgtacgcggccaccaggctctcctacggccagaagagcatctccttcgcgcccgacggcgcgtactggcgcgccgcgcgccgcgcgtgcatgtcggagctcctcggcccgccgcgggtgcgcgggctccgcgacgcccgggagcgcgaggccgccgcgctcgtcgcggccgtggcggccgccggcgcctcccccgtcaacctgagcgacatggtcgccgccaccagccgcaggatcgtgcggcgcgtcgccttcggcgacggcgacggcgacgagagcatggacgtcaaggctgtcctcgacgagacccaggctcttcttggtggtctctgggtcaccgactacgtgccgtggctccggtgggtggacaccctcagcggcaagaggtggcggctggagcggcggttccgccagctcgacgcgctctacgagcgcgtcatcgacgaccacctcaacaagcgcaagcatgcatccgacgaagaagacgacttggtcgacgtgctcctccgcctccacggcgatccggctcaccggagcacgttcggcagccgcagccacatcaaaggcattctcacgtgggcgatgacggagctcgtcaggaacccggacgtgctcgccaaggcgcagcacgaggtgcgccgcgtcgtcgccgccggcgacaaggtgcgggaagccgacctcccggagctccactaccttcgcctggtcatcaaggagacactgcggctccacccggcggcgccgctgctggttccacgggagacgacggagccgttccgcacggcgcacggcgtcgagataccggccaggacgcgcgtcgtcgtcaacgcgatggcgatacacacggaccccggcgtctggggcccggacgcggagcggttcgtgcccgagcgccaccgcgacgacgccgacggctgcgcgcagcagcacgacgggttcgcgctggtgccgttcgggatcgggcggaggagatgccccggcgtgcacttcgcggcggcggcggtggagctgctgctggccaacctcctcttctgcttcgactggcgcgcgccgccggggcgcgaggtggacgtggaggaggagaacgggctggcggtgcacaagaagaaccctctcgtgctcatcgccaccaagagcaagaggaacacagtacaggaagcggcggcgagcgtcgtgcgcacgggccgccttgaaggtacagataaacggatggtcgtcccggtcgccgatcgccattggttttcccgtcgcgatcaggaaacgcaggcgcaaccggcccgtacccgtatctggatggcttgggccagtgctgcaatgtccatggcgtctctccaagctcctgagttccttgcgtcatgcctcctcctcctcgccaccattctcctcttcaagcagcttctcgcgccgtcgtccaagaagcgcgccgcctcaccgtcgctgccacgcccgaagggcctccctctcatcggcaacctccaccaggtcggcgcgctcccgcaccgctccctcgccgcgctcgccgccaggcatgcggcgccgctcatgctgctccgcctcggctccgtgccgacgctcgtcgtctccaccgccgacgcggcgcgggcgctgttccggaacaacgaccgcgcgctgtcggggcgcccggcgctgtacgcggccacaaggctctcctacggccagaagaacatctccttcgcgcccgacggcgcgtactggcgcgccgcgcgccgcgcgtgcatgtcggcgctcctcggggcgccgcgggtgcgcgagctccgcgacgccagggagcgtgaggccgccgcgctcatcgcggccgtggcggccgccggcgcctcccccgtcaacctgagcgacatggtcgctgccaccagcagcaggatcgtgcggcgcgtcgccttcggcgacggcgacggcgacggcgacgagagcatggacgtcaaggctgtcctcgacgagacccagtctcttcttggtggtctctgggtcgccgactacgtgccgtggctccggtgggtggacaccctcagcggcatgaggcggcggctggagcggcggttccgccagctcgacgcattctacgagcgcgtcatcgacgaccacatcaacaagcgcaagcatgcatccgacgaggaagacgacttggtcgacgtgctcctccgcctccacggcgatccggctcaccggagcatgttcggcagccgcacccacatcaaaggcattctcacggatatgttcattgccgggagcgacacgtcggcggtgacggtgcagtgggcgatgacggagctcgtcaggaacccggacgtgctcgccaaggcgcagcacgaggtgcgccgcgtcatcgccgccggcggcggcggcgacaaggacggcgccatggtgcgggaagccgacctcccggagctccactacctgcggctggtcatcaaggagacactccggctccacccggcgtcgccgctggtgcaacgggagacgacggagccgttccgcacggcgcatggcgtcgagataccggccaggacgcgcgtcgtcatcaacgcgatggcgatacacacggaccccggcgtctggggcccggacgcggagcggttcgtgcccgagcgccaccgcgacgacgccgacggcgagcagcagcacgagcacgacgggttcgcgctggtgccgttcgggatcgggcggaggagctgccccggcgtgcacttcgcggcggcggcggcggagctgctgctggccaacctcctcttctgcttcgactggcgcgcgctgccggggcgcgaggtggacgtggaggaggagaacgggctggcggattgggtaaagacagtacaggaagcggcggcgagcgtcgtgcgcacgggtcgccttcaaggtacagataaacggatggtcgtcccggtcgccgatcgccattggttttcccgtatggccgtatctggatggcttggggcagcgctgttgttggaccgccagaggccaacatcaacgtgcagaatacggccggagtttgtggaggatgcatgcgagacgcgtgcacgaacgatcggcgcgcgggttcggcaaagcggtggcagcgtgtggaactggccggccgcccccgcctga
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| Protein seq | MSMTSLQAPEFLASCLLLATILFFKQLLAPSSKQRAASPSLPRPRGLPLIGNLHQVGALPHRSLAALAARHAAPLMLLRLGSVPTLVVSTADAARALFRDNDRALSGRPALYAATRLSYGQKSISFAPDGAYWRAARRACMSELLGPPRVRGLRDAREREAAALVAAVAAAGASPVNLSDMVAATSRRIVRRVAFGDGDGDESMDVKAVLDETQALLGGLWVTDYVPWLRWVDTLSGKRWRLERRFRQLDALYERVIDDHLNKRKHASDEEDDLVDVLLRLHGDPAHRSTFGSRSHIKGILTWAMTELVRNPDVLAKAQHEVRRVVAAGDKVREADLPELHYLRLVIKETLRLHPAAPLLVPRETTEPFRTAHGVEIPARTRVVVNAMAIHTDPGVWGPDAERFVPERHRDDADGCAQQHDGFALVPFGIGRRRCPGVHFAAAAVELLLANLLFCFDWRAPPGREVDVEEENGLAVHKKNPLVLIATKSKRNTVQEAAASVVRTGRLEGTDKRMVVPVADRHWFSRRDQETQAQPARTRIWMAWASAAMSMASLQAPEFLASCLLLLATILLFKQLLAPSSKKRAASPSLPRPKGLPLIGNLHQVGALPHRSLAALAARHAAPLMLLRLGSVPTLVVSTADAARALFRNNDRALSGRPALYAATRLSYGQKNISFAPDGAYWRAARRACMSALLGAPRVRELRDAREREAAALIAAVAAAGASPVNLSDMVAATSSRIVRRVAFGDGDGDGDESMDVKAVLDETQSLLGGLWVADYVPWLRWVDTLSGMRRRLERRFRQLDAFYERVIDDHINKRKHASDEEDDLVDVLLRLHGDPAHRSMFGSRTHIKGILTDMFIAGSDTSAVTVQWAMTELVRNPDVLAKAQHEVRRVIAAGGGGDKDGAMVREADLPELHYLRLVIKETLRLHPASPLVQRETTEPFRTAHGVEIPARTRVVINAMAIHTDPGVWGPDAERFVPERHRDDADGEQQHEHDGFALVPFGIGRRSCPGVHFAAAAAELLLANLLFCFDWRALPGREVDVEEENGLADWVKTVQEAAASVVRTGRLQGTDKRMVVPVADRHWFSRMAVSGWLGAALLLDRQRPTSTCRIRPEFVEDACETRARTIGARVRQSGGSVWNWPAAPA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_04g0017390 | OsLiXu_04g0017390.02 | Chr04 | 25893823 | 25895848 | - | IsoSeq | ||
| CDS seq | atgcggcgccgctcatgctgctccgcctcggctccgtgccgacgctcgtcgtctccaccgccgacgcggcgcgggcgctgttccgggacaacgaccgcgcgctgtcggggcgcccggcgctgtacgcggccaccaggctctcctacggccagaagagcatctccttcgcgcccgacggcgcgtactggcgcgccgcgcgccgcgcgtgcatgtcggagctcctcggcccgccgcgggtgcgcgggctccgcgacgcccgggagcgcgaggccgccgcgctcgtcgcggccgtggcggccgccggcgcctcccccgtca
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| Protein seq | MRRRSCCSASAPCRRSSSPPPTRRGRCSGTTTARCRGARRCTRPPGSPTARRASPSRPTARTGAPRAARACRSSSARRGCAGSATPGSARPPRSSRPWRPPAPPPS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr04 | 25894534 | 25894918 | - | OsLiXu_04g0017390.02 | OsLiXu_04g0017390.01,OsLiXu_04g0017390.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0480650 | RBH | 0.0 | 0.0 | 0.905488 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g40460 | RBH | 0.0 | 0.0 | 0.085798 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0480700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0017280 | RBH | 0.0 | 0.000000 | 0.364686 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0018080 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0017770 | RBH | 0.0 | 0.0 | 0.541063 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0017500 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0017720 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0374400 | RBH | 0.6128315 | 0.2837395 | 11.807726 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0016520 | RBH | 0.0 | 0.042867 | 0.037313 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0373000 | RBH | 1.4945655 | 1.3463945 | 0.0356895 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0017030 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0016880 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0016900 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0021710 | RBH | 0.000000 | 0.000000 | 0.124505 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0017500 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G016780 | RBH | 0.0 | 0.000000 | 0.100197 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0016730 | RBH | 0.0 | 1.128282 | 0.0 |
