Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_03g0040700 | OGI:03098230 | 10/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr03:38025650-38026143 | ||||||||
| Gene Symbol | CDPK7, OsCDPK7, OsCPK7, CDPK1, OsCDPK11, CDPK12, OsCDPK13, OsCDPK12, OsCPK11, OsCDPK1 | ||||||||||
| DNA seq | tatttgcacgccaacataatcaagaccatcctaactatattctgttgtttatccatcttccttgacagttcttgcactgtatgtgtcagatcatgtgtgaagtcttgtggatttataaattagtttatgaattttccattttacaatttgcaggtcaggttttcactgagttggttgggagtgcatagtatgttgctcatgaggtactgcacaaatgttatggaccataatctgaggtactacaaaaatattatggaccataatctgaggtactacacaaatgttatggaccagaatatttaatatattctggaattgctaaagtgatcgcatcctatccttttccagagacacgacaaggaatatttgatgcagttctgaagggtctcatcgattttcaatcagttctaaagacatctaacagtgaaaagtatcttatagggaaaatgctatctcaatgtccttcagagcgtttgaactttgaagggccatga
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| CDS seq | tatttgcacgccaacataatcaagaccatcctaactatattctgttgtttatccatcttccttgacagttcttgcactgtcaggttttcactgagttggttgggagtgcataagacacgacaaggaatatttgatgcagttctgaagggtctcatcgattttcaatcagttctaaagacatctaacagtgaaaagtatcttatagggaaaatgctatctcaatgtccttcagagcgtttgaactttgaagggccatga |
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| Protein seq | YLHANIIKTILTIFCCLSIFLDSSCTVRFSLSWLGVHKTRQGIFDAVLKGLIDFQSVLKTSNSEKYLIGKMLSQCPSERLNFEGP |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_03g0040700 | OsLiXu_03g0040700.01 | Chr03 | 38025650 | 38026143 | + | NAM | ||
| CDS seq | tatttgcacgccaacataatcaagaccatcctaactatattctgttgtttatccatcttccttgacagttcttgcactgtcaggttttcactgagttggttgggagtgcataagacacgacaaggaatatttgatgcagttctgaagggtctcatcgattttcaatcagttctaaagacatctaacagtgaaaagtatcttatagggaaaatgctatctcaatgtccttcagagcgtttgaactttgaagggccatga
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| Protein seq | YLHANIIKTILTIFCCLSIFLDSSCTVRFSLSWLGVHKTRQGIFDAVLKGLIDFQSVLKTSNSEKYLIGKMLSQCPSERLNFEGP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0041240 | RBH | 0.000000 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0002250 | SBH | 0.737338 | 16.386963 | 7.244877 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0002270 | SBH | 3.261928 | 82.062157 | 23.522017 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0002260 | SBH | 0.395678 | 1.481594 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0040710 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0040470 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0041050 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0040960 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0040640 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0040760 | RBH | 0.133473 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G040530 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0040240 | RBH | 0.0 | 0.0 | 0.0 |
