Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_03g0023250 | OGI:03056960 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr03:22328907-22333909 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | aagagttttctgttttttggtcgtcaccaccgtcacgccgtgccgtgcagaccatcctctctctcctccattaccatccgctccccccgactccgacgccgcgcaggtgcagcgcaagcatggcagagtaaggcggagacagcgtcacaagcagaagcagctctgacactcgccgccagattccgctccccaaacaccgcactccaattccctcttcttcgtcgggtgcatcggccgcccaccaagccccgcccgccgaacaccatggccgccggctacggcgagcagccgctgccgctggtacaggaggccaccgcccgaatcttctccggtggcgcagacgcgtcccgcaccaccgtccgattggcccacttcctcctcccccgcgcgggcgcctcccacccgcccgctctcccgcccctgcctcccagcgatttcggccccgtcctcgacgacggcctcaaggtcgagttcaagggctgggcgccggaatcccccaagctctggaggcggtgggtcgccaagctccgcccgcgccacgagcccctgtggcgtaaggttgggatcctcgacgccgtcctcgccaccacgtgccgggtgcgccgcgacgagggcgcgctgctccagctcgccgccttctggtgcggcgagaccaacaccttcgtgttcccctggggtgaggccacggtgacgctcgaggacgtcgcggtgctcggcggcctgccgctgctgggcaggcccgtgcgcgcgccgccgcaggacgcgctccgcggcgacgtggacgcgctcgaggccgtacgccgcgctctctacctcagtaagaacaagaacagcaggcccgaccgtaccgcttGggcgagacatttcctcgagcgccctccggggaaggtcaaagtcggcggcggcggcggcgacgaagcgtgcgggcgcctcgagcacggcgcgttcctggccatgtggctgtctctcttcgtgctaccggcggctccgttcgatgtggtccggacggaggtgctcccactcgccgcccggctggcgcgcggccgcggcgtggcgctcgctcccgctgtcctggctagcatatacagtgatctctccgcgctcaagcgctacatcaatttggagaaaagatatcaggccttcgtcgtgtgggcacccctgcaaatcgttcagctttggctctggaagcggttccctgagcttcgccctcctgagaccacgggcaccaatcaacctgacggccatggcatacccacggaatcccagtggcgaaatgctctcaaggtgcttgaccccgtttatgtccacgcagtgttcatgtcaccaatgaagtttgaatggaggccctatgggagtagcagcttcgcgctgcggccagagatgggtagccatcgtgttcacggccaagatatagcagaaagtgcagaattgttatccttcatactatgtttacgtgcttgtgagcttgtgggcatgcgctgcattgagcattaccgtccgcatcgtgttgcaaggcagctcagctttgaccaggatattcctggaactcttCcccgtgttaactcaaactgggtggctgcatgggaaacatacaaaatggagcctaagaaatttgtattcattgttcccaagtacaagcccgctgttacaattgattatgtgcaatggtggaagccttacttgttgggatgtgctgctgctgttgttaaagctaggaagatgaaagaacttccacttttacttagtccaagaaaaagaaagattgatgtgcctcctgatgttagtccaaaaagggtaggaaatggtgcaaaggaaaaggcagtggaattgtcgtttgaggcaccaataggctcagcaagcacaataaacgaattatcttgtgtatcagccaccaaaatagtacaaggcaaatcttttcagcaaggtaataaggaaccaccagaccttgtcgttgcacatgacagagagaatagaagctcgctacatagtgaagtactgcaaaatctccttgttgaggatgccacaaacactggcagcaatgaagccttatgtgcagtaactatagctgatatgcactcaacagaagtgtcgtttgatgttccagttgccttagtaagcattgtagatgaattaccttgtgtgtcagcctccatagaagaacaaggcaaaccttgccagcaagataaagaggaagcacacaacctttctgtcacacatgacagggagaatagaagctcgctacatagtgaagtactgcaaaatctcgttgttgaggatgccacaaacactggcagcaatgaagccttaggtgccataactgtagctgatatgcactcagcagaagtgtcgtttgatgttccagttgacttggtaagtattgtagatgaattaccttgtgtgtcagccaccaaagaagaacaaggcaatgattgccagcaagataaagaggaagcacgagacctttctgtcacacacgacaaagagaatagaagctcagtagtttatgtgcactcaacacctgttgtggctgcaaacaccggcaacaacaaagcctttggaccttcacccatagttgatgtgcagtcagcacctgaaaacgttgtggtgatcagcgatgacgataatgaggatgaggtcggtgggatgcaccAaaaaccaccgcagttggaaacagcaccatcctccttagaagggcaaaatgcagaaagtcagataatcagtgcaagcagtaatcctcaggacagccgagtgatgaaagatgttagggtccaaagcaattgtgatcacgaaactgataatgttcgaagcaatattgttctcagaaaagaatcatttgaagtacttgctgttgatactgtccagcctggttttaatctcttggatacaccaacagggcaaacgcagacatgcgctgttacaggacagatagacaagggatacatggtggaaaaagaaattttggctggtgtggaaggtatcaaaaatgtaaatgaagacgtgtccccatcatttcaagaaataaactctcctgtggaagattgcatggtggccaatagaagaatgggctcaggtatgaggattaatAaaaatacagttccatatttcaatcaagctatgtaccaaataaatcatgacAaaaatgtgttgacgataacgtaaactttatgctattttttcaatttttgtaggaaacaactattctagtggtttggcacatgtgaatacccaattgatcaacagagtagtttgtactaggacactatactatcttagaccattttggttgtcaaaacatggtcagaacaaagatgcaagtgacaccactaccgatgaaggaactttccaaccaagacgggaagttgggacgccacaaatgattgaagaggcatttgcagctcgacaagcccaaaaagttgagttgcaaaaggtaattgatcgcctgaaggaagagattgtggcactagaggttccatgagaggacaggtgctcctcaataaattgaggtatggcttggagtaaatatatgtcagtacttttgagtctttagagcatgagtcctgatgttattattactacattAaaatagactaacagcgtgcgctaggcagtggctgagtgctgagagaaacgtaaaggggcctcatcaaagagatgatacttaggccccgttcttttctcacaaagataaagattttacctcggtattcgttagcatgcttttcaaactacaaaacgtgcgaaaactttctatatgaaagttgctttaaagtatcAaatatattcatttttcaagtttgtaataattAaaactcaattaatcatgcgttaatggctttctccttttgcgcacccgcttttaatcttcatcttcagaagatttgaacggggccttaatgtagtatttcccctagagatttgctcatttacatgttatacctcacccTtacacagtggattgtgcttcctcatcttgaagtgaaactaaaatacagttgataAGatattagtcgattttgggaagttctacattggtagaagttaaatctaactgttgaattcatgtacacctcccattcagaactaggatcacagtggaagcacatccactagaagcccccaactgaccaacggcctcgaggcaccatggtggccacccattctgactccaggtctgccaccagtctttgaatcccacacaaagaactgcccttcttccgcgttgctgtcctcatttaccatatctcatgttgggtttcgcttgtatcatatttgctaatggtttcttggtgaggtagccagcggccagcggaggcgatgagccgatgagggaggcagctaagcgaagaatgaatgtgttcagatgctgctcgatgcgaaaatggaggtatgatctatagattcagcagtgatttttttttatgcccgacttatcatctgatcatggattagtgaattgcatcattggtacttcatgaaagaaattgtcgaggaagacttgggagtgtggtaggttgcagggaagaaccgcatgttggtgaatgagcttgaagcgttgaatgtgtattgtttttgcatccaacctgaaagatgcagatttttgcctctgataagtggaatgcatttagttgtttttttgtccattggatcgacatatatgaacattcagcagtaagaggtccttaagatggccacttgatgacatggaaaccctgttggtgcgatcaacgttttgacgagatctgttgctcttcggaaaagagaactttttgaattaatttgcttatccgaaagaagtgtgttcatggttaatatgcatacctttgagcacaaatgacttatgttaagggttgattaaccacttttgtacttttttttgggaggaatcatttatctacttgttacactggtaatacttgaccattaactgaaaacatgcaatctgctttagcatccacttctgaattttatatgtaaatggatgcagaactctgctttagctaacc
More
|
||||||||||
| CDS seq | atggccgccggctacggcgagcagccgctgccgctggtacaggaggccaccgcccgaatcttctccggtggcgcagacgcgtcccgcaccaccgtccgattggcccacttcctcctcccccgcgcgggcgcctcccacccgcccgctctcccgcccctgcctcccagcgatttcggccccgtcctcgacgacggcctcaaggtcgagttcaagggctgggcgccggaatcccccaagctctggaggcggtgggtcgccaagctccgcccgcgccacgagcccctgtggcgtaaggttgggatcctcgacgccgtcctcgccaccacgtgccgggtgcgccgcgacgagggcgcgctgctccagctcgccgccttctggtgcggcgagaccaacaccttcgtgttcccctggggtgaggccacggtgacgctcgaggacgtcgcggtgctcggcggcctgccgctgctgggcaggcccgtgcgcgcgccgccgcaggacgcgctccgcggcgacgtggacgcgctcgaggccgtacgccgcgctctctacctcagtaagaacaagaacagcaggcccgaccgtaccgcttGggcgagacatttcctcgagcgccctccggggaaggtcaaagtcggcggcggcggcggcgacgaagcgtgcgggcgcctcgagcacggcgcgttcctggccatgtggctgtctctcttcgtgctaccggcggctccgttcgatgtggtccggacggaggtgctcccactcgccgcccggctggcgcgcggccgcggcgtggcgctcgctcccgctgtcctggctagcatatacagtgatctctccgcgctcaagcgctacatcaatttggagaaaagatatcaggccttcgtcgtgtgggcacccctgcaaatcgttcagctttggctctggaagcggttccctgagcttcgccctcctgagaccacgggcaccaatcaacctgacggccatggcatacccacggaatcccagtggcgaaatgctctcaaggtgcttgaccccgtttatgtccacgcagtgttcatgtcaccaatgaagtttgaatggaggccctatgggagtagcagcttcgcgctgcggccagagatgggtagccatcgtgttcacggccaagatatagcagaaagtgcagaattgttatccttcatactatgtttacgtgcttgtgagcttgtgggcatgcgctgcattgagcattaccgtccgcatcgtgttgcaaggcagctcagctttgaccaggatattcctggaactcttCcccgtgttaactcaaactgggtggctgcatgggaaacatacaaaatggagcctaagaaatttgtattcattgttcccaagtacaagcccgctgttacaattgattatgtgcaatggtggaagccttacttgttgggatgtgctgctgctgttgttaaagctaggaagatgaaagaacttccacttttacttagtccaagaaaaagaaagattgatgtgcctcctgatgttagtccaaaaagggtaggaaatggtgcaaaggaaaaggcagtggaattgtcgtttgaggcaccaataggctcagcaagcacaataaacgaattatcttgtgtatcagccaccaaaatagtacaaggcaaatcttttcagcaaggtaataaggaaccaccagaccttgtcgttgcacatgacagagagaatagaagctcgctacatagtgaagtactgcaaaatctccttgttgaggatgccacaaacactggcagcaatgaagccttatgtgcagtaactatagctgatatgcactcaacagaagtgtcgtttgatgttccagttgccttagtaagcattgtagatgaattaccttgtgtgtcagcctccatagaagaacaaggcaaaccttgccagcaagataaagaggaagcacacaacctttctgtcacacatgacagggagaatagaagctcgctacatagtgaagtactgcaaaatctcgttgttgaggatgccacaaacactggcagcaatgaagccttaggtgccataactgtagctgatatgcactcagcagaagtgtcgtttgatgttccagttgacttggtaagtattgtagatgaattaccttgtgtgtcagccaccaaagaagaacaaggcaatgattgccagcaagataaagaggaagcacgagacctttctgtcacacacgacaaagagaatagaagctcagtagtttatgtgcactcaacacctgttgtggctgcaaacaccggcaacaacaaagcctttggaccttcacccatagttgatgtgcagtcagcacctgaaaacgttgtggtgatcagcgatgacgataatgaggatgaggtcggtgggatgcaccAaaaaccaccgcagttggaaacagcaccatcctccttagaagggcaaaatgcagaaagtcagataatcagtgcaagcagtaatcctcaggacagccgagtgatgaaagatgttagggtccaaagcaattgtgatcacgaaactgataatgttcgaagcaatattgttctcagaaaagaatcatttgaagtacttgctgttgatactgtccagcctggttttaatctcttggatacaccaacagggcaaacgcagacatgcgctgttacaggacagatagacaagggatacatggtggaaaaagaaattttggctggtgtggaaggtatcaaaaatgtaaatgaagacgtgtccccatcatttcaagaaataaactctcctgtggaagattgcatggtggccaatagaagaatgggctcaggaaacaactattctagtggtttggcacatgtgaatacccaattgatcaacagagtagtttgtactaggacactatactatcttagaccattttggttgtcaaaacatggtcagaacaaagatgcaagtgacaccactaccgatgaaggaactttccaaccaagacgggaagttgggacgccacaaatgattgaagaggcatttgcagctcgacaagcccaaaaagttgagttgcaaaaggtaattgatcgcctgaaggaagagattgtggcactagaggttccatga
More
|
||||||||||
| Protein seq | MAAGYGEQPLPLVQEATARIFSGGADASRTTVRLAHFLLPRAGASHPPALPPLPPSDFGPVLDDGLKVEFKGWAPESPKLWRRWVAKLRPRHEPLWRKVGILDAVLATTCRVRRDEGALLQLAAFWCGETNTFVFPWGEATVTLEDVAVLGGLPLLGRPVRAPPQDALRGDVDALEAVRRALYLSKNKNSRPDRTAWARHFLERPPGKVKVGGGGGDEACGRLEHGAFLAMWLSLFVLPAAPFDVVRTEVLPLAARLARGRGVALAPAVLASIYSDLSALKRYINLEKRYQAFVVWAPLQIVQLWLWKRFPELRPPETTGTNQPDGHGIPTESQWRNALKVLDPVYVHAVFMSPMKFEWRPYGSSSFALRPEMGSHRVHGQDIAESAELLSFILCLRACELVGMRCIEHYRPHRVARQLSFDQDIPGTLPRVNSNWVAAWETYKMEPKKFVFIVPKYKPAVTIDYVQWWKPYLLGCAAAVVKARKMKELPLLLSPRKRKIDVPPDVSPKRVGNGAKEKAVELSFEAPIGSASTINELSCVSATKIVQGKSFQQGNKEPPDLVVAHDRENRSSLHSEVLQNLLVEDATNTGSNEALCAVTIADMHSTEVSFDVPVALVSIVDELPCVSASIEEQGKPCQQDKEEAHNLSVTHDRENRSSLHSEVLQNLVVEDATNTGSNEALGAITVADMHSAEVSFDVPVDLVSIVDELPCVSATKEEQGNDCQQDKEEARDLSVTHDKENRSSVVYVHSTPVVAANTGNNKAFGPSPIVDVQSAPENVVVISDDDNEDEVGGMHQKPPQLETAPSSLEGQNAESQIISASSNPQDSRVMKDVRVQSNCDHETDNVRSNIVLRKESFEVLAVDTVQPGFNLLDTPTGQTQTCAVTGQIDKGYMVEKEILAGVEGIKNVNEDVSPSFQEINSPVEDCMVANRRMGSGNNYSSGLAHVNTQLINRVVCTRTLYYLRPFWLSKHGQNKDASDTTTDEGTFQPRREVGTPQMIEEAFAARQAQKVELQKVIDRLKEEIVALEVP |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_03g0023250 | OsLiXu_03g0023250.01 | Chr03 | 22328907 | 22333909 | + | NAM | ||
| CDS seq | atggccgccggctacggcgagcagccgctgccgctggtacaggaggccaccgcccgaatcttctccggtggcgcagacgcgtcccgcaccaccgtccgattggcccacttcctcctcccccgcgcgggcgcctcccacccgcccgctctcccgcccctgcctcccagcgatttcggccccgtcctcgacgacggcctcaaggtcgagttcaagggctgggcgccggaatcccccaagctctggaggcggtgggtcgccaagctccgcccgcgccacgagcccctgtggcgtaaggttgggatcctcgacgccgtcctcgccaccacgtgccgggtgcgccgcgacgagggcgcgctgctccagctcgccgccttctggtgcggcgagaccaacaccttcgtgttcccctggggtgaggccacggtgacgctcgaggacgtcgcggtgctcggcggcctgccgctgctgggcaggcccgtgcgcgcgccgccgcaggacgcgctccgcggcgacgtggacgcgctcgaggccgtacgccgcgctctctacctcagtaagaacaagaacagcaggcccgaccgtaccgcttGggcgagacatttcctcgagcgccctccggggaaggtcaaagtcggcggcggcggcggcgacgaagcgtgcgggcgcctcgagcacggcgcgttcctggccatgtggctgtctctcttcgtgctaccggcggctccgttcgatgtggtccggacggaggtgctcccactcgccgcccggctggcgcgcggccgcggcgtggcgctcgctcccgctgtcctggctagcatatacagtgatctctccgcgctcaagcgctacatcaatttggagaaaagatatcaggccttcgtcgtgtgggcacccctgcaaatcgttcagctttggctctggaagcggttccctgagcttcgccctcctgagaccacgggcaccaatcaacctgacggccatggcatacccacggaatcccagtggcgaaatgctctcaaggtgcttgaccccgtttatgtccacgcagtgttcatgtcaccaatgaagtttgaatggaggccctatgggagtagcagcttcgcgctgcggccagagatgggtagccatcgtgttcacggccaagatatagcagaaagtgcagaattgttatccttcatactatgtttacgtgcttgtgagcttgtgggcatgcgctgcattgagcattaccgtccgcatcgtgttgcaaggcagctcagctttgaccaggatattcctggaactcttCcccgtgttaactcaaactgggtggctgcatgggaaacatacaaaatggagcctaagaaatttgtattcattgttcccaagtacaagcccgctgttacaattgattatgtgcaatggtggaagccttacttgttgggatgtgctgctgctgttgttaaagctaggaagatgaaagaacttccacttttacttagtccaagaaaaagaaagattgatgtgcctcctgatgttagtccaaaaagggtaggaaatggtgcaaaggaaaaggcagtggaattgtcgtttgaggcaccaataggctcagcaagcacaataaacgaattatcttgtgtatcagccaccaaaatagtacaaggcaaatcttttcagcaaggtaataaggaaccaccagaccttgtcgttgcacatgacagagagaatagaagctcgctacatagtgaagtactgcaaaatctccttgttgaggatgccacaaacactggcagcaatgaagccttatgtgcagtaactatagctgatatgcactcaacagaagtgtcgtttgatgttccagttgccttagtaagcattgtagatgaattaccttgtgtgtcagcctccatagaagaacaaggcaaaccttgccagcaagataaagaggaagcacacaacctttctgtcacacatgacagggagaatagaagctcgctacatagtgaagtactgcaaaatctcgttgttgaggatgccacaaacactggcagcaatgaagccttaggtgccataactgtagctgatatgcactcagcagaagtgtcgtttgatgttccagttgacttggtaagtattgtagatgaattaccttgtgtgtcagccaccaaagaagaacaaggcaatgattgccagcaagataaagaggaagcacgagacctttctgtcacacacgacaaagagaatagaagctcagtagtttatgtgcactcaacacctgttgtggctgcaaacaccggcaacaacaaagcctttggaccttcacccatagttgatgtgcagtcagcacctgaaaacgttgtggtgatcagcgatgacgataatgaggatgaggtcggtgggatgcaccAaaaaccaccgcagttggaaacagcaccatcctccttagaagggcaaaatgcagaaagtcagataatcagtgcaagcagtaatcctcaggacagccgagtgatgaaagatgttagggtccaaagcaattgtgatcacgaaactgataatgttcgaagcaatattgttctcagaaaagaatcatttgaagtacttgctgttgatactgtccagcctggttttaatctcttggatacaccaacagggcaaacgcagacatgcgctgttacaggacagatagacaagggatacatggtggaaaaagaaattttggctggtgtggaaggtatcaaaaatgtaaatgaagacgtgtccccatcatttcaagaaataaactctcctgtggaagattgcatggtggccaatagaagaatgggctcaggaaacaactattctagtggtttggcacatgtgaatacccaattgatcaacagagtagtttgtactaggacactatactatcttagaccattttggttgtcaaaacatggtcagaacaaagatgcaagtgacaccactaccgatgaaggaactttccaaccaagacgggaagttgggacgccacaaatgattgaagaggcatttgcagctcgacaagcccaaaaagttgagttgcaaaaggtaattgatcgcctgaaggaagagattgtggcactagaggttccatga
More
|
|||||||
| Protein seq | MAAGYGEQPLPLVQEATARIFSGGADASRTTVRLAHFLLPRAGASHPPALPPLPPSDFGPVLDDGLKVEFKGWAPESPKLWRRWVAKLRPRHEPLWRKVGILDAVLATTCRVRRDEGALLQLAAFWCGETNTFVFPWGEATVTLEDVAVLGGLPLLGRPVRAPPQDALRGDVDALEAVRRALYLSKNKNSRPDRTAWARHFLERPPGKVKVGGGGGDEACGRLEHGAFLAMWLSLFVLPAAPFDVVRTEVLPLAARLARGRGVALAPAVLASIYSDLSALKRYINLEKRYQAFVVWAPLQIVQLWLWKRFPELRPPETTGTNQPDGHGIPTESQWRNALKVLDPVYVHAVFMSPMKFEWRPYGSSSFALRPEMGSHRVHGQDIAESAELLSFILCLRACELVGMRCIEHYRPHRVARQLSFDQDIPGTLPRVNSNWVAAWETYKMEPKKFVFIVPKYKPAVTIDYVQWWKPYLLGCAAAVVKARKMKELPLLLSPRKRKIDVPPDVSPKRVGNGAKEKAVELSFEAPIGSASTINELSCVSATKIVQGKSFQQGNKEPPDLVVAHDRENRSSLHSEVLQNLLVEDATNTGSNEALCAVTIADMHSTEVSFDVPVALVSIVDELPCVSASIEEQGKPCQQDKEEAHNLSVTHDRENRSSLHSEVLQNLVVEDATNTGSNEALGAITVADMHSAEVSFDVPVDLVSIVDELPCVSATKEEQGNDCQQDKEEARDLSVTHDKENRSSVVYVHSTPVVAANTGNNKAFGPSPIVDVQSAPENVVVISDDDNEDEVGGMHQKPPQLETAPSSLEGQNAESQIISASSNPQDSRVMKDVRVQSNCDHETDNVRSNIVLRKESFEVLAVDTVQPGFNLLDTPTGQTQTCAVTGQIDKGYMVEKEILAGVEGIKNVNEDVSPSFQEINSPVEDCMVANRRMGSGNNYSSGLAHVNTQLINRVVCTRTLYYLRPFWLSKHGQNKDASDTTTDEGTFQPRREVGTPQMIEEAFAARQAQKVELQKVIDRLKEEIVALEVP
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_03g0023250 | OsLiXu_03g0023250.02 | Chr03 | 22328907 | 22333909 | + | NAM | ||
| CDS seq | atggccgccggctacggcgagcagccgctgccgctggtacaggaggccaccgcccgaatcttctccggtggcgcagacgcgtcccgcaccaccgtccgattggcccacttcctcctcccccgcgcgggcgcctcccacccgcccgctctcccgcccctgcctcccagcgatttcggccccgtcctcgacgacggcctcaaggtcgagttcaagggctgggcgccggaatcccccaagctctggaggcggtgggtcgccaagctccgcccgcgccacgagcccctgtggcgtaaggttgggatcctcgacgccgtcctcgccaccacgtgccgggtgcgccgcgacgagggcgcgctgctccagctcgccgccttctggtgcggcgagaccaacaccttcgtgttcccctggggtgaggccacggtgacgctcgaggacgtcgcggtgctcggcggcctgccgctgctgggcaggcccgtgcgcgcgccgccgcaggacgcgctccgcggcgacgtggacgcgctcgaggccgtacgccgcgctctctacctcagtaagaacaagaacagcaggcccgaccgtaccgcttGggcgagacatttcctcgagcgccctccggggaaggtcaaagtcggcggcggcggcggcgacgaagcgtgcgggcgcctcgagcacggcgcgttcctggccatgtggctgtctctcttcgtgctaccggcggctccgttcgatgtggtccggacggaggtgctcccactcgccgcccggctggcgcgcggccgcggcgtggcgctcgctcccgctgtcctggctagcatatacagtgatctctccgcgctcaagcgctacatcaatttggagaaaagatatcaggccttcgtcgtgtgggcacccctgcaaatcgttcagctttggctctggaagcggttccctgagcttcgccctcctgagaccacgggcaccaatcaacctgacggccatggcatacccacggaatcccagtggcgaaatgctctcaaggtgcttgaccccgtttatgtccacgcagtgttcatgtcaccaatgaagtttgaatggaggccctatgggagtagcagcttcgcgctgcggccagagatgggtagccatcgtgttcacggccaagatatagcagaaagtgcagaattgttatccttcatactatgtttacgtgcttgtgagcttgtgggcatgcgctgcattgagcattaccgtccgcatcgtgttgcaaggcagctcagctttgaccaggatattcctggaactcttCcccgtgttaactcaaactgggtggctgcatgggaaacatacaaaatggagcctaagaaatttgtattcattgttcccaagtacaagcccgctgttacaattgattatgtgcaatggtggaagccttacttgttgggatgtgctgctgctgttgttaaagctaggaagatgaaagaacttccacttttacttagtccaagaaaaagaaagattgatgtgcctcctgatgttagtccaaaaagggtaggaaatggtgcaaaggaaaaggcagtggaattgtcgtttgaggcaccaataggctcagcaagcacaataaacgaattatcttgtgtatcagccaccaaaatagtacaaggcaaatcttttcagcaaggtaataaggaaccaccagaccttgtcgttgcacatgacagagagaatagaagctcgctacatagtgaagtactgcaaaatctccttgttgaggatgccacaaacactggcagcaatgaagccttatgtgcagtaactatagctgatatgcactcaacagaagtgtcgtttgatgttccagttgccttagtaagcattgtagatgaattaccttgtgtgtcagcctccatagaagaacaaggcaaaccttgccagcaagataaagaggaagcacacaacctttctgtcacacatgacagggagaatagaagctcgctacatagtgaagtactgcaaaatctcgttgttgaggatgccacaaacactggcagcaatgaagccttaggtgccataactgtagctgatatgcactcagcagaagtgtcgtttgatgttccagttgacttggtaagtattgtagatgaattaccttgtgtgtcagccaccaaagaagaacaaggcaatgattgccagcaagataaagaggaagcacgagacctttctgtcacacacgacaaagagaatagaagctcagtagtttatgtgcactcaacacctgttgtggctgcaaacaccggcaacaacaaagcctttggaccttcacccatagttgatgtgcagtcagcacctgaaaacgttgtggtgatcagcgatgacgataatgaggatgaggtcggtgggatgcaccAaaaaccaccgcagttggaaacagcaccatcctccttagaagggcaaaatgcagaaagtcagataatcagtgcaagcagtaatcctcaggacagccgagtgatgaaagatgttagggtccaaagcaattgtgatcacgaaactgataatgttcgaagcaatattgttctcagaaaagaatcatttgaagtacttgctgttgatactgtccagcctggttttaatctcttggatacaccaacagggcaaacgcagacatgcgctgttacaggacagatagacaagggatacatggtggaaaaagaaattttggctggtgtggaaggtatcaaaaatgtaaatgaagacgtgtccccatcatttcaagaaataaactctcctgtggaagattgcatggtggccaatagaagaatgggctcaggaaacaactattctagtggtttggcacatgtgaatacccaattgatcaacagagtagtttgtactaggacactatactatcttagaccattttggttgtcaaaacatggtcagaacaaagatgcaagtgacaccactaccgatgaaggaactttccaaccaagacgggaagttgggacgccacaaatgattgaagaggcatttgcagctcgacaagcccaaaaagttgagttgcaaaaggtaattgatcgcctgaaggaagagattgtggcactagaggttccatga
More
|
|||||||
| Protein seq | MAAGYGEQPLPLVQEATARIFSGGADASRTTVRLAHFLLPRAGASHPPALPPLPPSDFGPVLDDGLKVEFKGWAPESPKLWRRWVAKLRPRHEPLWRKVGILDAVLATTCRVRRDEGALLQLAAFWCGETNTFVFPWGEATVTLEDVAVLGGLPLLGRPVRAPPQDALRGDVDALEAVRRALYLSKNKNSRPDRTAWARHFLERPPGKVKVGGGGGDEACGRLEHGAFLAMWLSLFVLPAAPFDVVRTEVLPLAARLARGRGVALAPAVLASIYSDLSALKRYINLEKRYQAFVVWAPLQIVQLWLWKRFPELRPPETTGTNQPDGHGIPTESQWRNALKVLDPVYVHAVFMSPMKFEWRPYGSSSFALRPEMGSHRVHGQDIAESAELLSFILCLRACELVGMRCIEHYRPHRVARQLSFDQDIPGTLPRVNSNWVAAWETYKMEPKKFVFIVPKYKPAVTIDYVQWWKPYLLGCAAAVVKARKMKELPLLLSPRKRKIDVPPDVSPKRVGNGAKEKAVELSFEAPIGSASTINELSCVSATKIVQGKSFQQGNKEPPDLVVAHDRENRSSLHSEVLQNLLVEDATNTGSNEALCAVTIADMHSTEVSFDVPVALVSIVDELPCVSASIEEQGKPCQQDKEEAHNLSVTHDRENRSSLHSEVLQNLVVEDATNTGSNEALGAITVADMHSAEVSFDVPVDLVSIVDELPCVSATKEEQGNDCQQDKEEARDLSVTHDKENRSSVVYVHSTPVVAANTGNNKAFGPSPIVDVQSAPENVVVISDDDNEDEVGGMHQKPPQLETAPSSLEGQNAESQIISASSNPQDSRVMKDVRVQSNCDHETDNVRSNIVLRKESFEVLAVDTVQPGFNLLDTPTGQTQTCAVTGQIDKGYMVEKEILAGVEGIKNVNEDVSPSFQEINSPVEDCMVANRRMGSGNNYSSGLAHVNTQLINRVVCTRTLYYLRPFWLSKHGQNKDASDTTTDEGTFQPRREVGTPQMIEEAFAARQAQKVELQKVIDRLKEEIVALEVP
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr03 | 22332409 | 22333202 | + | OsLiXu_03g0023250.02 | OsLiXu_03g0023250.01,OsLiXu_03g0023250.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.815960 | 0.227851 | 0.415758 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0565300 | RBH | 1.579731 | 1.437552 | 0.859671 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g36760 | RBH | 1.063478 | 0.962249 | 0.220441 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0565300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0023570 | RBH | 0.606799 | 2.517483 | 3.524631 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0023410 | RBH | 0.459817 | 0.258325 | 1.563734 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0023450 | RBH | 0.682982 | 2.419933 | 3.952631 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0023480 | RBH | 0.088379 | 0.113166 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0023270 | RBH | 3.794683 | 4.599432 | 6.540996 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0347900 | RBH | 1.821081 | 6.2620695 | 10.820024 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0023040 | RBH | 0.257056 | 0.129427 | 0.755466 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0350100 | RBH | 2.172272 | 13.824653 | 8.7807465 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0023310 | RBH | 0.117859 | 0.338306 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0023360 | RBH | 0.416175 | 7.213279 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0023440 | RBH | 2.083160 | 6.934967 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0023110 | RBH | 0.311826 | 1.409626 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G023150 | RBH | 0.808773 | 0.964290 | 0.681408 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0023110 | RBH | 0.456201 | 3.744364 | 1.625688 |
