Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_03g0016350 | OGI:03032660 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr03:12643518-12646814 | ||||||||
| Gene Symbol | DRUS1, OsCrRLK1L8, CrRLK1L8, FLR1 | ||||||||||
| DNA seq | gcgagctccccctccaccaccgccgccgccgccgcggctgccactctcggttcctcttcctccccaccgagctccaccccccacgaatcttagccccccactcctcttcacgccgcgccgctaagagcgatcgagccgggggtttccgtcagagacgccgcgaaaatcgccccagatcggtggatgggcgatctgtgagccgcggcagggggagagagagagagagagagagagaggaagctgaagccatgatggtgagttctaggtttgtggccgtgtttcttctggtggcgctggcgccggcggcgcgggggcagggaggaggagggggcaactcgagcgccccggcggcgacgccgccggggccgttcgtgccgcgggacaacatcctgctcgactgcggcgcgacggggcaggccaacgacacggacgggcggctctggaccggggacacgggctccaagtacctgccggcgaacctcgccgccgcggccgccaccgcgcaggacccttctgtgccgcaggtgccgtacctcaccgcgcgcttctccgcggcgcccttcacctactcgttcccggtcggcgccgggcgcaagttcctcaggctccacttctacccggcgaactactccaaccgcaacgccgccgacgcgctcttctccgtctccatccccgaccccaacatcacgcttctctccaacttcagcgcctaccagaccgccctcgccctcaacttcgactacctcgtccgcgaattctccgtcaatgtcactgcctcaaccctcgacctcactttcacaccggagaagggccacccaaacgccttcgccttcgtcaacggcatcgaggtcgtctcctcccccgacctctttggcagctccaacccgatggaggtcaccggcgacggcagcggcacgcctttcccgatcgacgccggtactgctatgcagaccatgtaccggctcaacgtcggcggcaacgcgatctccccctccaaggacacgggcgggtatcggtcatgggaagatgacacgccatacataccctttgcgtcattcggggtgagctacgcgaatgacaccaatgtccccataaattaccctgacagtattccgcagtatgtggcgccggcagatgtctactctacggcgcggtcgatggggcctgacaacaatgtgaatttgcaatacaatctcacctgggcaatgcaggtggatgctggttatcagtacctcgtgaggctccatttctgtgaaatacagtctgggatcagtaagatcaatcaacggacatttgacatctacatcaacaaccagactgcttttagtggcgctgatgtgattgcgtggtctactgggcttggcattccagtgtacaaggattttgtggtgttcaccatgggttcagggcctatggatttgtgggtggatctacatccaaatgtcaaaaacaagccacagtactataatgctatcctcaatgggatggaggtttttaagttgcagcttactaatgggagccttgctgggctcaaccctgtccctagtattgtaccaacagcgtctggtggaaattctgggaagaagtcaagtgttggtccaattgttggaggagtgattggaggtctggtagttcttgcacttggatgttgctgcttctttgtgatctgcaagcgtcggcagagagcaggtaaggattcaggaatgagtgatgggcattctggttggttgccgctctcactttatggcaactcacacacttccagctcagccaagtcacacactactgggagccatgcttcgtctttgccatccaacctgtgccgccatttctcatttgtggagatcaaggctgcgacaaacaactttgatgagtccctcctccttggcgtgggtggttttggtaaagtttaccgtggagagattgacggaggagcaaccaaggtggctatcaagcgtggaaacccattgtctgagcagggtgtgcatgagttccaaacagagatcgagatgttgtcgaagctccgccaccgacatcttgtgtcgcttattggttactgcgaggagaagaatgagatgatcctggtctatgactatatggctcacggaactcttcgtgagcacctgtacaagacccaaaatgcaccactttcttggaggcagcgcttggatatctgcattggtgcagctcgtgggcttcactacctacacactggtgcaaagcacaccatcatccaccgtgatgtgaagacgacaaacatcctcctcgatgagaagtgggtagccaaggtttcagattttggtttgtccaagactggtccaacaatggatcatacgcatgtgagcacagttgtcaagggcagttttggttatcttgatcctgagtacttccgcaggcagcagcttactgacaaatctgatgtctattcttttggtgttgtactgtttgaggtcctatgtgctcggcctgccttgaatcccactcttgcaaaggaagaagttagcttggctgagtgggcattacactgccagaagaagggtattcttgatcagattgttgatccccacctgaagggaaagattgctccacaatgtttcaagaagtttgcagaaacagcggagaagtgtgtttctgatcagggcattgaccgtccttcgatgggagatgtgctgtggaacttggaatttgcccttcaaatgcaggaaagtgcagaggagagcggaagccttggatgtgggatgtcagacgacagcactccccttgtgatagttggaaagaaggatcccaatgatccatctatcgagtcaagcaccacgacaacgacaactacctcgataagcatgggtgagcagagtgttgcaagtattgactcggacgggctgacgcctagtgctgtcttctcgcagatcatgaaccccaagggacggtgaggtaacaatgtctcggtttgttaccctgcaggcataatctattcattcagcatatgttcatgagtttgcccttatgttctcttgaattatggatcggaagtcagataattgtttcatattagatggttctgtctttccctgtgttttctccctgatgtagtgcctataagcttatcggcatgtattgtaatataccataccactgctattgacccaacgaatgatactgtatgagagagtgatacgcatgatccacactcccttttttgttatcttaatcatgtgttcggtcggagccccaacacaacagctgctgagctgcacttattgtcttgtataatattgatcatcatactcgattgttggc
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| CDS seq | atgatggtgagttctaggtttgtggccgtgtttcttctggtggcgctggcgccggcggcgcgggggcagggaggaggagggggcaactcgagcgccccggcggcgacgccgccggggccgttcgtgccgcgggacaacatcctgctcgactgcggcgcgacggggcaggccaacgacacggacgggcggctctggaccggggacacgggctccaagtacctgccggcgaacctcgccgccgcggccgccaccgcgcaggacccttctgtgccgcaggtgccgtacctcaccgcgcgcttctccgcggcgcccttcacctactcgttcccggtcggcgccgggcgcaagttcctcaggctccacttctacccggcgaactactccaaccgcaacgccgccgacgcgctcttctccgtctccatccccgaccccaacatcacgcttctctccaacttcagcgcctaccagaccgccctcgccctcaacttcgactacctcgtccgcgaattctccgtcaatgtcactgcctcaaccctcgacctcactttcacaccggagaagggccacccaaacgccttcgccttcgtcaacggcatcgaggtcgtctcctcccccgacctctttggcagctccaacccgatggaggtcaccggcgacggcagcggcacgcctttcccgatcgacgccggtactgctatgcagaccatgtaccggctcaacgtcggcggcaacgcgatctccccctccaaggacacgggcgggtatcggtcatgggaagatgacacgccatacataccctttgcgtcattcggggtgagctacgcgaatgacaccaatgtccccataaattaccctgacagtattccgcagtatgtggcgccggcagatgtctactctacggcgcggtcgatggggcctgacaacaatgtgaatttgcaatacaatctcacctgggcaatgcaggtggatgctggttatcagtacctcgtgaggctccatttctgtgaaatacagtctgggatcagtaagatcaatcaacggacatttgacatctacatcaacaaccagactgcttttagtggcgctgatgtgattgcgtggtctactgggcttggcattccagtgtacaaggattttgtggtgttcaccatgggttcagggcctatggatttgtgggtggatctacatccaaatgtcaaaaacaagccacagtactataatgctatcctcaatgggatggaggtttttaagttgcagcttactaatgggagccttgctgggctcaaccctgtccctagtattgtaccaacagcgtctggtggaaattctgggaagaagtcaagtgttggtccaattgttggaggagtgattggaggtctggtagttcttgcacttggatgttgctgcttctttgtgatctgcaagcgtcggcagagagcaggtaaggattcaggaatgagtgatgggcattctggttggttgccgctctcactttatggcaactcacacacttccagctcagccaagtcacacactactgggagccatgcttcgtctttgccatccaacctgtgccgccatttctcatttgtggagatcaaggctgcgacaaacaactttgatgagtccctcctccttggcgtgggtggttttggtaaagtttaccgtggagagattgacggaggagcaaccaaggtggctatcaagcgtggaaacccattgtctgagcagggtgtgcatgagttccaaacagagatcgagatgttgtcgaagctccgccaccgacatcttgtgtcgcttattggttactgcgaggagaagaatgagatgatcctggtctatgactatatggctcacggaactcttcgtgagcacctgtacaagacccaaaatgcaccactttcttggaggcagcgcttggatatctgcattggtgcagctcgtgggcttcactacctacacactggtgcaaagcacaccatcatccaccgtgatgtgaagacgacaaacatcctcctcgatgagaagtgggtagccaaggtttcagattttggtttgtccaagactggtccaacaatggatcatacgcatgtgagcacagttgtcaagggcagttttggttatcttgatcctgagtacttccgcaggcagcagcttactgacaaatctgatgtctattcttttggtgttgtactgtttgaggtcctatgtgctcggcctgccttgaatcccactcttgcaaaggaagaagttagcttggctgagtgggcattacactgccagaagaagggtattcttgatcagattgttgatccccacctgaagggaaagattgctccacaatgtttcaagaagtttgcagaaacagcggagaagtgtgtttctgatcagggcattgaccgtccttcgatgggagatgtgctgtggaacttggaatttgcccttcaaatgcaggaaagtgcagaggagagcggaagccttggatgtgggatgtcagacgacagcactccccttgtgatagttggaaagaaggatcccaatgatccatctatcgagtcaagcaccacgacaacgacaactacctcgataagcatgggtgagcagagtgttgcaagtattgactcggacgggctgacgcctagtgctgtcttctcgcagatcatgaaccccaagggacggtga
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| Protein seq | MMVSSRFVAVFLLVALAPAARGQGGGGGNSSAPAATPPGPFVPRDNILLDCGATGQANDTDGRLWTGDTGSKYLPANLAAAAATAQDPSVPQVPYLTARFSAAPFTYSFPVGAGRKFLRLHFYPANYSNRNAADALFSVSIPDPNITLLSNFSAYQTALALNFDYLVREFSVNVTASTLDLTFTPEKGHPNAFAFVNGIEVVSSPDLFGSSNPMEVTGDGSGTPFPIDAGTAMQTMYRLNVGGNAISPSKDTGGYRSWEDDTPYIPFASFGVSYANDTNVPINYPDSIPQYVAPADVYSTARSMGPDNNVNLQYNLTWAMQVDAGYQYLVRLHFCEIQSGISKINQRTFDIYINNQTAFSGADVIAWSTGLGIPVYKDFVVFTMGSGPMDLWVDLHPNVKNKPQYYNAILNGMEVFKLQLTNGSLAGLNPVPSIVPTASGGNSGKKSSVGPIVGGVIGGLVVLALGCCCFFVICKRRQRAGKDSGMSDGHSGWLPLSLYGNSHTSSSAKSHTTGSHASSLPSNLCRHFSFVEIKAATNNFDESLLLGVGGFGKVYRGEIDGGATKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEEKNEMILVYDYMAHGTLREHLYKTQNAPLSWRQRLDICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTMDHTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPALNPTLAKEEVSLAEWALHCQKKGILDQIVDPHLKGKIAPQCFKKFAETAEKCVSDQGIDRPSMGDVLWNLEFALQMQESAEESGSLGCGMSDDSTPLVIVGKKDPNDPSIESSTTTTTTTSISMGEQSVASIDSDGLTPSAVFSQIMNPKGR |
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| Function | Receptor-like protein kinase FERONIA [UniProtKB/Swiss-Prot:Q9SCZ4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_03g0016350 | OsLiXu_03g0016350.01 | Chr03 | 12643518 | 12646814 | + | NAM | ||
| CDS seq | atgatggtgagttctaggtttgtggccgtgtttcttctggtggcgctggcgccggcggcgcgggggcagggaggaggagggggcaactcgagcgccccggcggcgacgccgccggggccgttcgtgccgcgggacaacatcctgctcgactgcggcgcgacggggcaggccaacgacacggacgggcggctctggaccggggacacgggctccaagtacctgccggcgaacctcgccgccgcggccgccaccgcgcaggacccttctgtgccgcaggtgccgtacctcaccgcgcgcttctccgcggcgcccttcacctactcgttcccggtcggcgccgggcgcaagttcctcaggctccacttctacccggcgaactactccaaccgcaacgccgccgacgcgctcttctccgtctccatccccgaccccaacatcacgcttctctccaacttcagcgcctaccagaccgccctcgccctcaacttcgactacctcgtccgcgaattctccgtcaatgtcactgcctcaaccctcgacctcactttcacaccggagaagggccacccaaacgccttcgccttcgtcaacggcatcgaggtcgtctcctcccccgacctctttggcagctccaacccgatggaggtcaccggcgacggcagcggcacgcctttcccgatcgacgccggtactgctatgcagaccatgtaccggctcaacgtcggcggcaacgcgatctccccctccaaggacacgggcgggtatcggtcatgggaagatgacacgccatacataccctttgcgtcattcggggtgagctacgcgaatgacaccaatgtccccataaattaccctgacagtattccgcagtatgtggcgccggcagatgtctactctacggcgcggtcgatggggcctgacaacaatgtgaatttgcaatacaatctcacctgggcaatgcaggtggatgctggttatcagtacctcgtgaggctccatttctgtgaaatacagtctgggatcagtaagatcaatcaacggacatttgacatctacatcaacaaccagactgcttttagtggcgctgatgtgattgcgtggtctactgggcttggcattccagtgtacaaggattttgtggtgttcaccatgggttcagggcctatggatttgtgggtggatctacatccaaatgtcaaaaacaagccacagtactataatgctatcctcaatgggatggaggtttttaagttgcagcttactaatgggagccttgctgggctcaaccctgtccctagtattgtaccaacagcgtctggtggaaattctgggaagaagtcaagtgttggtccaattgttggaggagtgattggaggtctggtagttcttgcacttggatgttgctgcttctttgtgatctgcaagcgtcggcagagagcaggtaaggattcaggaatgagtgatgggcattctggttggttgccgctctcactttatggcaactcacacacttccagctcagccaagtcacacactactgggagccatgcttcgtctttgccatccaacctgtgccgccatttctcatttgtggagatcaaggctgcgacaaacaactttgatgagtccctcctccttggcgtgggtggttttggtaaagtttaccgtggagagattgacggaggagcaaccaaggtggctatcaagcgtggaaacccattgtctgagcagggtgtgcatgagttccaaacagagatcgagatgttgtcgaagctccgccaccgacatcttgtgtcgcttattggttactgcgaggagaagaatgagatgatcctggtctatgactatatggctcacggaactcttcgtgagcacctgtacaagacccaaaatgcaccactttcttggaggcagcgcttggatatctgcattggtgcagctcgtgggcttcactacctacacactggtgcaaagcacaccatcatccaccgtgatgtgaagacgacaaacatcctcctcgatgagaagtgggtagccaaggtttcagattttggtttgtccaagactggtccaacaatggatcatacgcatgtgagcacagttgtcaagggcagttttggttatcttgatcctgagtacttccgcaggcagcagcttactgacaaatctgatgtctattcttttggtgttgtactgtttgaggtcctatgtgctcggcctgccttgaatcccactcttgcaaaggaagaagttagcttggctgagtgggcattacactgccagaagaagggtattcttgatcagattgttgatccccacctgaagggaaagattgctccacaatgtttcaagaagtttgcagaaacagcggagaagtgtgtttctgatcagggcattgaccgtccttcgatgggagatgtgctgtggaacttggaatttgcccttcaaatgcaggaaagtgcagaggagagcggaagccttggatgtgggatgtcagacgacagcactccccttgtgatagttggaaagaaggatcccaatgatccatctatcgagtcaagcaccacgacaacgacaactacctcgataagcatgggtgagcagagtgttgcaagtattgactcggacgggctgacgcctagtgctgtcttctcgcagatcatgaaccccaagggacggtga
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| Protein seq | MMVSSRFVAVFLLVALAPAARGQGGGGGNSSAPAATPPGPFVPRDNILLDCGATGQANDTDGRLWTGDTGSKYLPANLAAAAATAQDPSVPQVPYLTARFSAAPFTYSFPVGAGRKFLRLHFYPANYSNRNAADALFSVSIPDPNITLLSNFSAYQTALALNFDYLVREFSVNVTASTLDLTFTPEKGHPNAFAFVNGIEVVSSPDLFGSSNPMEVTGDGSGTPFPIDAGTAMQTMYRLNVGGNAISPSKDTGGYRSWEDDTPYIPFASFGVSYANDTNVPINYPDSIPQYVAPADVYSTARSMGPDNNVNLQYNLTWAMQVDAGYQYLVRLHFCEIQSGISKINQRTFDIYINNQTAFSGADVIAWSTGLGIPVYKDFVVFTMGSGPMDLWVDLHPNVKNKPQYYNAILNGMEVFKLQLTNGSLAGLNPVPSIVPTASGGNSGKKSSVGPIVGGVIGGLVVLALGCCCFFVICKRRQRAGKDSGMSDGHSGWLPLSLYGNSHTSSSAKSHTTGSHASSLPSNLCRHFSFVEIKAATNNFDESLLLGVGGFGKVYRGEIDGGATKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEEKNEMILVYDYMAHGTLREHLYKTQNAPLSWRQRLDICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTMDHTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPALNPTLAKEEVSLAEWALHCQKKGILDQIVDPHLKGKIAPQCFKKFAETAEKCVSDQGIDRPSMGDVLWNLEFALQMQESAEESGSLGCGMSDDSTPLVIVGKKDPNDPSIESSTTTTTTTSISMGEQSVASIDSDGLTPSAVFSQIMNPKGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.558885 | 1.592484 | 2.503489 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0333200 | RBH | 3.209712 | 1.833660 | 13.546865 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g21540 | RBH | 2.128168 | 1.218577 | 3.387756 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0333200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0016670 | RBH | 0.708560 | 15.218404 | 12.094436 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0016510 | RBH | 0.741026 | 13.933247 | 6.060256 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0016530 | RBH | 1.891302 | 20.243298 | 21.588009 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0016520 | RBH | 0.323377 | 0.939839 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0016300 | RBH | 6.046770 | 29.789415 | 25.348478 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0203100 | RBH | 11.4874965 | 64.8266715 | 25.432886 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0016180 | RBH | 0.190401 | 0.657408 | 3.202395 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0207200 | RBH | 14.0046405 | 49.2472935 | 29.3698715 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0016410 | RBH | 0.278637 | 0.555158 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0016440 | RBH | 0.477991 | 22.789072 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0016480 | RBH | 7.329693 | 28.787218 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0028390 | RBH | 0.0 | 0.294180 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0016270 | RBH | 0.371074 | 8.392616 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G016230 | RBH | 0.546409 | 6.354139 | 7.023473 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0016180 | RBH | 2.115359 | 25.700970 | 14.151611 |
