Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_03g0001860 | OGI:03003330 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr03:1259338-1265034 | ||||||||
| Gene Symbol | FLS, 2-ODD2, Os2-ODD2, 2ODD2, Os2ODD2, OsF3H, F3H, F3H2, OsF3H2, OsS5H2, OsF3H03g | ||||||||||
| DNA seq | cggctcgttccagtacacctacaaccgagtactacaaacaacttcaaccgagaaactacgggggtgtttgggagatcctctcacaaaacaataagtcgggctctctcccaaacaccaccccctctctcccaaacaccacctacacctacaaccgagtactacaaaccagttctcgactagatcaagaattcaagatgtgtctgtaggtgttgttctgaagagctccaagcagtgttcttggtcgaggtttctgctccagaacttcttgtagtactcgtcgtaggtgtagttccggtagacggccggggagccatcggtgatgagcttctgagctgggccgatgagcacgtcgttgcaggggcacaggaacgacgcgacggacatcctcgctttgtcagagttgacgacagcacggtgccacacgctcttgtatcttccgttgcttagcgcctgcaatatatcatatatggaagttacagaggttacaaattctgctgcagagcagaaccaacacttggaaaatatttactgaatAaaaaaaatacagttcagtgctttgcagttcagatttcctgcaaatatttaactactctttgcaaagtataaaccatggcaattggcatccgatagaagaatcttcatttatctactcctagagaaaaatctctgtgtgcgacgtatcacggtatcgatatcttttagtactatactcaatccattatatctggctgtttagggcctcttcgattcataaaaatgatagaatctggccaagtattttcatataatttaaattcctatgaattttttcatacatgtccctttgattatagaaaagaaaggaaactttctataagattgtattacttgtttcatatttcttaggaaaaatagcaatgaagtaattttcttttgtttttcccataacactatcaaaagactcatattgtttttcctgtgttttttatattcatgtaagatttgagaagcgttactaccctaattcttgcggtttttctattcttgtgtttttactgtcctgcaaatcaaaaaggggtccttattggtccttttctattatcacagttattataatgttggtcaacagctcgtcttttttttttctgcaacaagaagtgtttgtcctaggtgacccaactatattctgccgcactagcattgtctgccacctagcctgatcgtttaccaacaagctatacctgaacacacaacagcttcaattgccatggttaaggctgtgtttagttccacgttaaaattagaaatttgactaaaattggaagtttgaagaaaaaaagttaaaagtttatgtgtgtatgaaagttttgatgtgatgaaaaagttggaagttgaaaaaaaagttgagaactaaacaagcactaagattttcagcaatgttatctgaacacctaacctagtccattatatactctgataaaagaaactgatatatgcatcacctgtagctgatcaccaatgttgatcaccagcgcgttgggctgtggattcacggcgatccacctgccttccttgagaacttgcaggccggccacctgctggtccatgaggaggatggtgagggcgttcgggtcggtgtgcgccggcagtccgaacgtcagctctggctccgggcacttggggtagaagttcaccgccatatgctgctcctgctcaccaagaaccttcttgatgtagtcctgttccaagcccaggctctcggatatcgctccgtacagtctgaatccgagctcccgaacttctttgcagtatgtgcttatgatctccctgcaccatcgtcaaagtaaattcatcttatggttaataatataaggattaacttaggagataatgcgtgattaattcccttgatcttttgtcctactggtcctaagttcgaccttgtttttggataaacaaaggataactttcggcctgagcgaagaatgcgcacaagtgcacaaccatatttatgtatatcaggatttgaaataaagtcatccaccatcacaccaacgagctccaatgagctcctattgaaatccccatccaagcactgatgagaagggaggtcctacgaaaccgacactagtggattcttagcaggtgaaatgatcccagcactaggcatggatgcacgtgaccacttcatcgtttctgatgttgggatcttcatgtgattgtgcacatgactgatgcgatgcgactttttcagtaggggaaaaatgtggttctcattgcattgtcttactagtagctccaaccttctttctgtttcctcgatcgatgtctgtgctaaaattgcctcttacagtatatgagtgcagagaggcattgctagcatgacatgtcaacctcactagttcatgttgttacaatatataaaaatgatttgtaatactacttatcccatcaataatttattttaaatctcatcttacctctaagaggctctatctacctcctgcctcaagttgtttcttgttacacaaggggcaccaaagtgtttcctcctcaactttaatctttgctatacaatctagaaatccttatattttaaaatggagagaacaattgtctactgtctccaatatcaaacaacaagtgtaataatatagccaattattagtttcaaaaagtggcacatcatctacagctaatctaatactctatccatacaatacttacacaaacaaatatatactacacacaccgtcttatagcccgtgctactgttagctacaaatatgtaacacacttttcttctctatctcctctcttctcatctctgcttaacctacccataaatcttatttgtcatgaaaatcactttcatataattatatttttaatgccagagtctcttcttctcaactttaatctccactaagaaacctagagatgctcataatttaaaactgagaaagtagttgtttactacctccgatctcaaatagcaagtataatagtatagccatctattattagcttcaaaaattggcacatcatctacagctaatctaatagtctatccatataatagttacacataaatatttactacacacgatggcttataactcgtgctatagctgactacaaatctataacaccgctattattctcctcttctatcatctctccacctaatcacaaatttgatgtggcaatttttgaagcccgctacttcaattattgcactaactcaaataaatagcattatagaatgcgtgcagtcaaaccttgaatcttaaatgattaattcatgcaaaaatactaaaatttaacatgagaaaatggtgttggtagttttggcatggaaatctcttttatataattatatttttaatcctttttaccgatagtagaaccaatctaaatcgtatatcttattctaatccaatagatcatatctatttctactaccaatcaactactagtagtataataattgtttctactcataatagaactcataaatcaatggttaaaatcaattctaaggtcgtgttctataatacaccttttcaacttccattccctcatttttcatgtgcaagctttctaaactgctaaaccatacgtttttttaaaaaaatctcatatagaaaagttcttttaaaaatcatattaatccacttatcaagtttttagctaatgctttattaattacgtgctaatccgttcctccattttacgtgccaggagaaaggttcccaacccccaaacaaacacagcctatggtgataatgccaatattagaatactaattagtaaggatcaccgtcatggtacttatttttaatagtttttatgaaaataaaattagaaaaggtagtgataaaatatgtacattagagattatcgatgtctaacaataagtaaaagaaaacggagacaatattttgttcattctactgcaagctaatgagtaatgaaacatgataaacgtggagccgtggtttgttggagtattggacgggagtacttcctccatccAaaaaaaaactaaacattgaagaaaagggtacaatgaatctgtgataactctttgttatctttcatgaaagcaaaaggtctgtttgtcccggaatttgtttagaatggagccctgtctctctggcacatggtagccacagcccacagctagagtcgttcaggttcagagtggtttttttttccccaagaactgttcagagtggttagcctggcattttcaaaccacctcgaaacacatcgttcagtatcacgcaaggagcgaaaaagattggtcaagtactatagttcttttctgtccgtggggtatggaccaaacttgaaaatggcaacgttttactttggtttccaaggattaaacattttattttaagaaactccgtttccctaaggaaaaaaaaaagcaacgctgaaacatgtggggacttggaattaacatctgtgtgcatgagttgtgagttgtgaatgggaaaggtaaccacttgtaattgtgggcgtgtttagatccctaattttttttgccaaaaatatcacaccaaatgtttagacacatgtataaagcattaaatgtggacgaaaaaaacaattgcacagtttgcatgtaaattgcgagatgaatcttttgagcctaattgcgttatgatttggtgatgtgatgctacattaaatatttattaatgacggattaattagacttaataaatttatctcacagtttacaggtggaatttgtaatttgttttgtatattaaaaaaaattttgtgtaaagaactagacacggcctgcatggagtaatttcaccagccgtccaagctagctattcgtctgtcctgttgtttctttcaatacgaaagcgaagatggagcagtgatgactgacttgcagagtcttttgagatgagcaagaaatggtctttggagtacttggaataggagtagtagagaaggcaggaaaagtggagtaacctgaaggaagtggggttggatggccaatcagggaggtagcggtgaagcgggtagcagtggaggcggaggtagtcgcgccagttgtgcacggtctccttgcggacgttgaagctggtggagaggcggatcttcttggccgggtcgtcggagtagagcttggccttctcctccgccggcagccggaagaagtcgtgcgccaccgccagcaccgacagtgtcagctccactggcaccccatggttgagcacctgatcaactccatcgatcgattgcatgcaacagcaacatccaacatgtgtgagacctgcttatacgagatggacgatgtagtaacgtaggtagtagtgctagtgatttattatacctggaagaagccgtgggagcggcaggcggcgccgacctgggagacgagcttggcgcggtcggggttggcgaggtcgacgacggggatggaggcgtcggagagcacgtcggcgaggcgcgggcgctgcgcctcggggcgcacgtagttgcccggcagcgtgtcgtggtctgccgtggagatgagctggtccgccatgccgcggtacacacacacaacttggcacgcaccacaccacggggggattactactataaataggcgcgacgcggcgccagcggagaagcgtagtcaggcggggagaggaagtcgagtcaggtggcggggggagaggggccggatgggtcgtcagcgat
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| CDS seq | atggcggaccagctcatctccacggcagaccacgacacgctgccgggcaactacgtgcgccccgaggcgcagcgcccgcgcctcgccgacgtgctctccgacgcctccatccccgtcgtcgacctcgccaaccccgaccgcgccaagctcgtctcccaggtcggcgccgcctgccgctcccacggcttcttccaggtgctcaaccatggggtgccagtggagctgacactgtcggtgctggcggtggcgcacgacttcttccggctgccggcggaggagaaggccaagctctactccgacgacccggccaagaagatccgcctctccaccagcttcaacgtccgcaaggagaccgtgcacaactggcgcgactacctccgcctccactgctacccgcttcaccgctacctccctgattggccatccaaccccacttccttcagggagatcataagcacatactgcaaagaagttcgggagctcggattcagactgtacggagcgatatccgagagcctgggcttggaacaggactacatcaagaaggttcttggtgagcaggagcagcatatggcggtgaacttctaccccaagtgcccggagccagagctgacgttcggactgccggcgcacaccgacccgaacgccctcaccatcctcctcatggaccagcaggtggccggcctgcaagttctcaaggaaggcaggtggatcgccgtgaatccacagcccaacgcgctggtgatcaacattggtgatcagctacaggcgctaagcaacggaagatacaagagcgtgtggcaccgtgctgtcgtcaactctgacaaagcgaggatgtccgtcgcgtcgttcctgtgcccctgcaacgacgtgctcatcggcccagctcagaagctcatcaccgatggctccccggccgtctaccggaactacacctacgacgagtactacaagaagttctggagcagaaacctcgaccaagaacactgcttggagctcttcagaacaacacctacagacacatcttga
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| Protein seq | MADQLISTADHDTLPGNYVRPEAQRPRLADVLSDASIPVVDLANPDRAKLVSQVGAACRSHGFFQVLNHGVPVELTLSVLAVAHDFFRLPAEEKAKLYSDDPAKKIRLSTSFNVRKETVHNWRDYLRLHCYPLHRYLPDWPSNPTSFREIISTYCKEVRELGFRLYGAISESLGLEQDYIKKVLGEQEQHMAVNFYPKCPEPELTFGLPAHTDPNALTILLMDQQVAGLQVLKEGRWIAVNPQPNALVINIGDQLQALSNGRYKSVWHRAVVNSDKARMSVASFLCPCNDVLIGPAQKLITDGSPAVYRNYTYDEYYKKFWSRNLDQEHCLELFRTTPTDTS |
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| Function | Flavanone 3-dioxygenase 2 [UniProtKB/Swiss-Prot:Q8W2X5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_03g0001860 | OsLiXu_03g0001860.01 | Chr03 | 1259338 | 1265034 | - | NAM | ||
| CDS seq | atggcggaccagctcatctccacggcagaccacgacacgctgccgggcaactacgtgcgccccgaggcgcagcgcccgcgcctcgccgacgtgctctccgacgcctccatccccgtcgtcgacctcgccaaccccgaccgcgccaagctcgtctcccaggtcggcgccgcctgccgctcccacggcttcttccaggtgctcaaccatggggtgccagtggagctgacactgtcggtgctggcggtggcgcacgacttcttccggctgccggcggaggagaaggccaagctctactccgacgacccggccaagaagatccgcctctccaccagcttcaacgtccgcaaggagaccgtgcacaactggcgcgactacctccgcctccactgctacccgcttcaccgctacctccctgattggccatccaaccccacttccttcagggagatcataagcacatactgcaaagaagttcgggagctcggattcagactgtacggagcgatatccgagagcctgggcttggaacaggactacatcaagaaggttcttggtgagcaggagcagcatatggcggtgaacttctaccccaagtgcccggagccagagctgacgttcggactgccggcgcacaccgacccgaacgccctcaccatcctcctcatggaccagcaggtggccggcctgcaagttctcaaggaaggcaggtggatcgccgtgaatccacagcccaacgcgctggtgatcaacattggtgatcagctacaggcgctaagcaacggaagatacaagagcgtgtggcaccgtgctgtcgtcaactctgacaaagcgaggatgtccgtcgcgtcgttcctgtgcccctgcaacgacgtgctcatcggcccagctcagaagctcatcaccgatggctccccggccgtctaccggaactacacctacgacgagtactacaagaagttctggagcagaaacctcgaccaagaacactgcttggagctcttcagaacaacacctacagacacatcttga
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| Protein seq | MADQLISTADHDTLPGNYVRPEAQRPRLADVLSDASIPVVDLANPDRAKLVSQVGAACRSHGFFQVLNHGVPVELTLSVLAVAHDFFRLPAEEKAKLYSDDPAKKIRLSTSFNVRKETVHNWRDYLRLHCYPLHRYLPDWPSNPTSFREIISTYCKEVRELGFRLYGAISESLGLEQDYIKKVLGEQEQHMAVNFYPKCPEPELTFGLPAHTDPNALTILLMDQQVAGLQVLKEGRWIAVNPQPNALVINIGDQLQALSNGRYKSVWHRAVVNSDKARMSVASFLCPCNDVLIGPAQKLITDGSPAVYRNYTYDEYYKKFWSRNLDQEHCLELFRTTPTDTS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.267915 | 0.712933 | 1.000335 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0122300 | RBH | 1.283707 | 1.293352 | 6.452974 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g03034 | RBH | 0.957475 | 0.798417 | 1.241321 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0122300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0001800 | RBH | 0.271671 | 0.0 | 2.565649 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0001790 | RBH | 0.0 | 3.979565 | 2.273602 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0001810 | RBH | 0.306288 | 4.303496 | 6.295050 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0001800 | RBH | 0.0 | 0.085656 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0001840 | RBH | 0.0 | 6.977256 | 21.926600 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0019900 | RBH | 2.515597 | 48.950394 | 1.6909015 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0001790 | RBH | 0.000000 | 0.515783 | 0.363576 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0019900 | RBH | 11.8725765 | 161.2926335 | 0.5518925 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0001860 | RBH | 0.0 | 0.857621 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0001880 | RBH | 0.0 | 22.747646 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0001830 | RBH | 0.0 | 17.007780 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0018090 | RBH | 0.696581 | 0.0 | 1.234399 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0001870 | RBH | 0.086369 | 2.025417 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G001860 | RBH | 0.0 | 0.000000 | 0.714620 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0001710 | RBH | 0.0 | 28.410433 | 9.604120 |
