Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_02g0038630 | OGI:02099070 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr02:36971204-36973281 | ||||||||
| Gene Symbol | RLCK90, OsRLCK90 | ||||||||||
| DNA seq | acattccaaccgtatcgtgtcagcgattagctcgatcacaattcacaaacaacatcaacacatgagcagaattttaacgaatacttttgcttttgcatatttacagcaaaacgttgattaattcctccagagctcgccgctccggtcgccgccggtgccggcggacgacgagctggcccggtcggagatggacgagagcggcgtctcgtcgccggcggcggcgaccaccatgtccctgtacgtcttcctgaccgcccacagcgccctgcagcactcgcccatgctcggcctctcctgcctcacgggggcgaggcaccggaacgccagctccatcaccatctccgcggcgcgcgccgtcgccggcgtccgcggcaggtgcgggtccagcacgtccgccgccgcgccctcggcgagcttgcgcatcgcccaccgcgccgtcagccgctcccgcatctcccgcctcgcctcgatgggtcgccgcccggaggcgatctccagcagcagcacgccgaaggagtagacgtcgctccggtcggtgagctggcacgtcttgaggtactccgggtcgaggtaccccgccgtgcccttcacctgcgtcgtcacgtgcgtcacgccgtcggcggcgccggcctcgccgacgcccagccgcgcgaacccgaagtcgcccaccttggcgcgcagcgacggggtgagcagcacgttcgacgacttgatgtcgcggtggatgatggggtggtcggcgtacatgtgcaggtacgtcaccgcgtgcgcgacgtcgatggcgatctccagccgcgcgcccatgtccaagaacctcccgttgcaccctgcgcccaagaacctccattagtaaccaatccgatcgagctcgagctcgagctgcaatggcggatcacacgcactgtcgaggtgctcgcggagcgtgccgttggggacgaactcgacgacgatgaccctctcctggccgcactcgaggtagccgtagaagcggacgaggctctggtgctcgatgcgcgccatggccttcacctcgctccggaactccacgtccacgtgcgggttctggtcccggagcttggcgcgcttgacggcgacgagcgtgccgtcggggaggacgcccctgtagacggcgccgaagccgccctggccgaccttgagcgccggcgagaagttgttggtggcgcgcaggatctcctccatggagaacaccgagctctggaactgcgtcgcgatgcctcttcccctgctgctgttgtacagcccgcgcatcgacgccttcccctgatcactgccaggccccggcactggaatcatcaaacagattcatctatcaagaattaattcccaactgcttaattgctgctctgaattttgaaaaaaatgtttgaagtcttctgtgattcagattttataaatatgattccgtaagctttgcactagcaattctgctccagaaagtaaagaattcagagtagttgcggcaattggactgtgataattgactgtttccaattcagagtagttgcagccggcaactggactgtgataattgactgatttcttgaacagttcaggaacagttgcatcaattgggcaaataattcggattatatcctgtttgcttgagcaattcaaatcgaggtaattaaggacaaggatgaaatagatggagaagaaatgatcgagagaaacaatttacatggcggcttcttgatcaagtcattgggctctcttctgctcctcctcttagcgttgctgccggaggcggaggtggccgccgccgacgacgacgaggaggaggaggtggagagcgagctgaaccacaacccgatcgtcctgaagagcgacttgagcgacgccgccctactgccgccgcccccgacggagagcggccgcgaccacgtgggggcggggctccacggcgcccatcgctccctctccagctccggcgtgcgcctcccggacgacgaggacgacatgctgcggcggcgctcgcgtccctccatggccgcgcagccgcccgcctccgctcagagctcccaacgcgccggccaccagggggcgcgtacgcgcggcgt
More
|
||||||||||
| CDS seq | atggagggacgcgagcgccgccgcagcatgtcgtcctcgtcgtccgggaggcgcacgccggagctggagagggagcgatgggcgccgtggagccccgcccccacgtggtcgcggccgctctccgtcgggggcggcggcagtagggcggcgtcgctcaagtcgctcttcaggacgatcgggttgtggttcagctcgctctccacctcctcctcctcgtcgtcgtcggcggcggccacctccgcctccggcagcaacgctaagaggaggagcagaagagagcccaatgacttgatcaagaagccgccattgccggggcctggcagtgatcaggggaaggcgtcgatgcgcgggctgtacaacagcagcaggggaagaggcatcgcgacgcagttccagagctcggtgttctccatggaggagatcctgcgcgccaccaacaacttctcgccggcgctcaaggtcggccagggcggcttcggcgccgtctacaggggcgtcctccccgacggcacgctcgtcgccgtcaagcgcgccaagctccgggaccagaacccgcacgtggacgtggagttccggagcgaggtgaaggccatggcgcgcatcgagcaccagagcctcgtccgcttctacggctacctcgagtgcggccaggagagggtcatcgtcgtcgagttcgtccccaacggcacgctccgcgagcacctcgacaggtgcaacgggaggttcttggacatgggcgcgcggctggagatcgccatcgacgtcgcgcacgcggtgacgtacctgcacatgtacgccgaccaccccatcatccaccgcgacatcaagtcgtcgaacgtgctgctcaccccgtcgctgcgcgccaaggtgggcgacttcgggttcgcgcggctgggcgtcggcgaggccggcgccgccgacggcgtgacgcacgtgacgacgcaggtgaagggcacggcggggtacctcgacccggagtacctcaagacgtgccagctcaccgaccggagcgacgtctactccttcggcgtgctgctgctggagatcgcctccgggcggcgacccatcgaggcgaggcgggagatgcgggagcggctgacggcgcggtgggcgatgcgcaagctcgccgagggcgcggcggcggacgtgctggacccgcacctgccgcggacgccggcgacggcgcgcgccgcggagatggtgatggagctggcgttccggtgcctcgcccccgtgaggcaggagaggccgagcatgggcgagtgctgcagggcgctgtgggcggtcaggaagacgtacagggacatggtggtcgccgccgccggcgacgagacgccgctctcgtccatctccgaccgggccagctcgtcgtccgccggcaccggcggcgaccggagcggcgagctctggaggaattaa
More
|
||||||||||
| Protein seq | MEGRERRRSMSSSSSGRRTPELERERWAPWSPAPTWSRPLSVGGGGSRAASLKSLFRTIGLWFSSLSTSSSSSSSAAATSASGSNAKRRSRREPNDLIKKPPLPGPGSDQGKASMRGLYNSSRGRGIATQFQSSVFSMEEILRATNNFSPALKVGQGGFGAVYRGVLPDGTLVAVKRAKLRDQNPHVDVEFRSEVKAMARIEHQSLVRFYGYLECGQERVIVVEFVPNGTLREHLDRCNGRFLDMGARLEIAIDVAHAVTYLHMYADHPIIHRDIKSSNVLLTPSLRAKVGDFGFARLGVGEAGAADGVTHVTTQVKGTAGYLDPEYLKTCQLTDRSDVYSFGVLLLEIASGRRPIEARREMRERLTARWAMRKLAEGAAADVLDPHLPRTPATARAAEMVMELAFRCLAPVRQERPSMGECCRALWAVRKTYRDMVVAAAGDETPLSSISDRASSSSAGTGGDRSGELWRN |
||||||||||
| Function | Calmodulin-binding receptor-like cytoplasmic kinase 2 [UniProtKB/Swiss-Prot:Q8VZJ9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_02g0038630 | OsLiXu_02g0038630.01 | Chr02 | 36971204 | 36973281 | - | NAM | ||
| CDS seq | atggagggacgcgagcgccgccgcagcatgtcgtcctcgtcgtccgggaggcgcacgccggagctggagagggagcgatgggcgccgtggagccccgcccccacgtggtcgcggccgctctccgtcgggggcggcggcagtagggcggcgtcgctcaagtcgctcttcaggacgatcgggttgtggttcagctcgctctccacctcctcctcctcgtcgtcgtcggcggcggccacctccgcctccggcagcaacgctaagaggaggagcagaagagagcccaatgacttgatcaagaagccgccattgccggggcctggcagtgatcaggggaaggcgtcgatgcgcgggctgtacaacagcagcaggggaagaggcatcgcgacgcagttccagagctcggtgttctccatggaggagatcctgcgcgccaccaacaacttctcgccggcgctcaaggtcggccagggcggcttcggcgccgtctacaggggcgtcctccccgacggcacgctcgtcgccgtcaagcgcgccaagctccgggaccagaacccgcacgtggacgtggagttccggagcgaggtgaaggccatggcgcgcatcgagcaccagagcctcgtccgcttctacggctacctcgagtgcggccaggagagggtcatcgtcgtcgagttcgtccccaacggcacgctccgcgagcacctcgacaggtgcaacgggaggttcttggacatgggcgcgcggctggagatcgccatcgacgtcgcgcacgcggtgacgtacctgcacatgtacgccgaccaccccatcatccaccgcgacatcaagtcgtcgaacgtgctgctcaccccgtcgctgcgcgccaaggtgggcgacttcgggttcgcgcggctgggcgtcggcgaggccggcgccgccgacggcgtgacgcacgtgacgacgcaggtgaagggcacggcggggtacctcgacccggagtacctcaagacgtgccagctcaccgaccggagcgacgtctactccttcggcgtgctgctgctggagatcgcctccgggcggcgacccatcgaggcgaggcgggagatgcgggagcggctgacggcgcggtgggcgatgcgcaagctcgccgagggcgcggcggcggacgtgctggacccgcacctgccgcggacgccggcgacggcgcgcgccgcggagatggtgatggagctggcgttccggtgcctcgcccccgtgaggcaggagaggccgagcatgggcgagtgctgcagggcgctgtgggcggtcaggaagacgtacagggacatggtggtcgccgccgccggcgacgagacgccgctctcgtccatctccgaccgggccagctcgtcgtccgccggcaccggcggcgaccggagcggcgagctctggaggaattaa
More
|
|||||||
| Protein seq | MEGRERRRSMSSSSSGRRTPELERERWAPWSPAPTWSRPLSVGGGGSRAASLKSLFRTIGLWFSSLSTSSSSSSSAAATSASGSNAKRRSRREPNDLIKKPPLPGPGSDQGKASMRGLYNSSRGRGIATQFQSSVFSMEEILRATNNFSPALKVGQGGFGAVYRGVLPDGTLVAVKRAKLRDQNPHVDVEFRSEVKAMARIEHQSLVRFYGYLECGQERVIVVEFVPNGTLREHLDRCNGRFLDMGARLEIAIDVAHAVTYLHMYADHPIIHRDIKSSNVLLTPSLRAKVGDFGFARLGVGEAGAADGVTHVTTQVKGTAGYLDPEYLKTCQLTDRSDVYSFGVLLLEIASGRRPIEARREMRERLTARWAMRKLAEGAAADVLDPHLPRTPATARAAEMVMELAFRCLAPVRQERPSMGECCRALWAVRKTYRDMVVAAAGDETPLSSISDRASSSSAGTGGDRSGELWRN
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.148462 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0821400 | RBH | 0.000000 | 0.460814 | 0.671330 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g57560 | RBH | 0.000000 | 0.287369 | 0.174462 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0821400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0039020 | RBH | 0.0 | 6.527699 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0039050 | RBH | 0.0 | 0.668785 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0038940 | RBH | 0.000000 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0038580 | RBH | 0.042423 | 0.070064 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0038600 | RBH | 0.000000 | 4.287785 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0575200 | RBH | 1.0131635 | 18.022582 | 0.038156 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0038270 | RBH | 0.060171 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0606600 | RBH | 0.673618 | 18.2839925 | 0.0433705 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0038570 | RBH | 0.0 | 0.072975 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0038480 | RBH | 0.0 | 3.715917 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0038620 | RBH | 0.0 | 4.370024 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0003790 | RBH | 0.575119 | 0.230788 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0038300 | RBH | 0.0 | 2.133045 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G038950 | RBH | 0.097502 | 0.0 | 0.220674 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0038850 | RBH | 0.875333 | 2.429660 | 0.0 |
