Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_02g0036220 | OGI:02094500 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr02:35272771-35280580 | ||||||||
| Gene Symbol | DGK3, OsDGK3 | ||||||||||
| DNA seq | ccctaaacacatcttagagactaagcttatatatcttaatattgagttattgtcgatatgaagtagtacatacatgcactcatgttaagtctagtacttaaaccagctaaataggttctactacattccactcactgggcgacactcaattcacaaccctaccagaattttggcattgaaaatagcgacaaactgaacatatcctcagttcaagcccagcagcaaaagatttccaaattggcataacaggaggggaaatctgagtaatttacagtacattgtgtttttccacttgatttttttgtttgttttgacggtaaaaatacattacaaatcaagttatatttgatttccactgaaataacctacgacacaacataatttatatgatacaacagtacattttgcccgattgtgctccggccatggctaatccctgcagctgctcccgaactatacataatctaacgatctagaatacaaccctggtatgaaatgcaaaactgacgaccggtgagtagggagctatcagcaaacgagatgctgtacagagcagaaaaatgaactttcaggaatattacctgattgaaatcggggaagatctcattgctccccatttatcatcagagaagggtaaggaactttgtttatctcgataatggttgactgctcctgtaggagtggttgtttccatggctctccatccatctgaacatacgcacgattccattggccacccctcatttcaaacttgatggctgcagcctgatacatggcagcggtttcagaggccaaggtattataagttcatgaagaccagaaaaaaaatttgaagaacatctcccagtctacctaatattcagaacattttctactccaagcaaatcttgtggtgtttgagcttgttatagacaatgtggattgcatgaaacacttgaggtttcatagTtttttttttcccaacagaccataagatcccatatgggcatcccaaattcccatagagcaattccttgccaatactcaatagaaatatagtgtgccaaacaaatgtaagtacctgagcaatgtgctttgctttaattagctcagccataacgaatgaagcatgccaaccttctttcagaccgaatatttcaagcaatccatcatcggaatgagcttcgacaaaacctttctgggatttggaatagaataaagcatcattttgtttccaaaaaaagaaaaagatgaacacataatttgcatataaatgcaaataccgcatgcgcattcccattaaatgcagctgattctagctactgcatcaactaaactgacagaacgatttcttaaataatacataattatttgaaagaatactgagcaatcatccatgatgcaactttatagtcatagaaagccctacataaacaaactaaaattgagagaacatatgcaatgaacatgataaatgtatattaactactaaccttttcaaggtaatcaggtttaagatcaccccatggatgccttccactgccgtagttgtataaatttaagaccaccagggatctaacactgcagttgggaaaagaatgcaagctgtgaaatacagaaccggattcatacagcacattcaaaagaaagatgagaacaatagctacttaagttccaaacttctcccaaatgggaagataatcaattcaacttgtatgtccagaatttattatatgctgacatttcttccgagcttcataacagtatcatagcacacattacattctgaatgcctgacacaccaggtcaccagccagtatgtacaggaatacaggatcagaatttcatgcttctggtatttttagagagagtttttcactactagaatgtttggggcagaaggatgaagggccactaagacattcatatataggaacgtagtagtatctttaaacttttggcatcacacaatttaggaaaatatgtaaaatcctacaatcatatttgaacctattgtattaatcttaattactttttttttcatattttcagctgaagatttgtgaacacgggtcagcatggcatcaggtcatgtatatgcatacgttgtccgttaccaagtgtcatccattatccctagcttattacttacactagtactatacccgtttattgcaacaggatctggagtaatacggggtgggccggtttggttttttacagggtgggctggttcgggtttttacggaatattctcgcgttgcacgggagggaggaagacgactgcgtatttaaagtagtcgagatttaacaaaatgtcagcatctcacagaattgttgagtgattcttttaaggatcataattgtttaaaagccttttttttcatataaaagaaaccaacaacttgccttgaaggcattgtaacttgctcccattcagaacaattgacttttttaatgtaaagtcgcaaaatgttcttaagccccctgcaacaacaaaccattctatcagcttcaaacaaagataaagagaagtgtgcaaacaaaggaagaatatcatagcatagctgtaattttattaaaccatcaaaacatggagagaaaagctaaagacatagttgattgctattgcatcatgattagtgccatgggcacatgaaatttttttggataatgatggacacatgaaacttgaattcatgtcgtcagatgttaactaagaacaaattcatcatgatgtttagatccatgatatatcttagaagtttggtactccctccgtttcagattataagacgttttgactttggtcaaagccaaactactttaaatttgactaactttgtagaaaaaagtagtaatatttacaacaccaacatagtttcattgaatctataattggataaattttcataatatatttgtcttgggttaaaaatattactacttttttctAaaaaaatagtcaaacttagagtagtttgactttgaccaaagtcaaaacgtcttataacctgaaacggagggaatatatcaaatgatcaaaaaatcctataattaacctaaaatcatggcagcttccggattcttgagtggatcaaaacaaaactgcctgacaccataaagttcggactttggagccattttagaatccatggaaaggcaggctgtctttatataccttaactgagggcttgctgtacaaggtgtgcagaaccacccctgtgtgcagctataaccagcatatatcaactgcacgagaataaaaacaaagatcattacaagaatcatttataagataaacatgactgtgataccaacaactatgttacagaaattgagattattcacaaaagcatacaaataagacattgaagctgggttatttcttttttccaatttcaaatatgttatataagcggtgtctcatctaacccatgtatcaggtatgcacagtaggtttcgtaggataatagaacatccggaacttactgtaaaatgagggtacataaacacaagttttgtgcatgtgtgggaatatgtgatctatcagctgtcatacttatctgctacttacaaaatatgcaagtgacataatgacatttaactagaacactctgaatgcaaggacttttaagctaattaacaatacagaaataaagaaaatctgtcagcaactcagcaccttatttgcaacaggcccttgagcaagatatggcttttcatcacgaagatggtggaagccataagcaacttgggcatccatccctgttcaatataaaataaggagcactcagcgatgaccaagattccaaataatggcaagaagccataagattcacaagagaaaaatcattaaacaagtattaatttcttgatgaaacttaaacgatcattacatctacatgtcctacaactttatgtcattacagcaattaggaacaccatcttaagttttagtttatttatgtcactcagaatttcaaacgaccagctgaaatactaatttgtcattttattgaaagtctaatcacatgggaactaaagcaaaaacttagaacctagtcacctaaccaccaatttattaaccagatggtctgaatattaaagatctctagcataggcaggatagagataggatttatttcatgagaattaatgcttctaccaaatgtaatcaccatgtaaagttcatgggaaaaaaacagaaggaacaaataaaaaaggttgattaaggattaccaatgctaaggtagttgtagaatactcctttatagcaagaagctttctcaggtaactcagagccattctcctgcacaatattagatttggtcctttaacaaaaccatatgtattaacatgttcatccgagaacattcacaaaaaaggaggcggtgtgatgttttttaagcatttattgataactgacagaggaaaacaaactgctagagcaatctatcgaataattatatggacaggactacattgttggtgagtatctcgttcttcacaacaaatgttaataaagtccacgaaacagcaataatcgcattggattacaacaccaagcacagcatacaaaaactactacacatacttagtaagcagagatatgaatagcatatatgcaacttgaagtactattgaaaatagtgaaacatgaactatttgaattatttctggcctagatagcataaagtgtcattgtataactcaacatacaaataactttcttcaggtttatagctccattgctttcaaataacttaattaactagagtacggagtgaatagtgaaatattaatagcatattaactattgcccttatttttataacttcaaagtatattactccctccgtttcacaatgtaagactttctagcattgcccacatacatatatatgttaatgaaactaaacacatacatatgcttagattcattaacatataaatgaatgtgggcaatgctagaaagtcttacattgtgaaacggaggaagtatatatttatttcagagcaataaggtgaatttatagtcaaaacctggcaaagttccaagcagtctgcaggttctgttttcttaagtgcatatggcaactcttttatctctccatctggcatcataactacagcttgccaactgcatgaacattactgttactcagtgcagaagttgatgaagcaccttttcacagttattatgaacttgataaaaatcagcagtacaaaaactgataattaacatatcaacaccttactctgcctatttactgtgagtgatcatcttgtgtgttcatacactgaattacttagcacaagtatagcagataggtgatcacaattcatatgttttattcaggaggggaaccatattctgcaaagctaatcattattctgtccaagtgagctagcaataaaaaggggagctgataaacgaccaatcatccctatctcacctgtcaagacggcaggtgggagctgtagctgccttgctgagataacgcttcacagctgaacgccaaccaaagggaaaagagccaccctgttcatatgcttattagttgtagtatgagtgaatcgctcaccttccctcaaaagcttagttaacactgtaaattacaaagaaaggatataaatagaacaattgcatcatatatggatccttacccatccaaatgatctggcaagatcatttcctgtaccaagtgggatgatacctgtgggtggaactggttctcttttcaacctataaagatctgtgagacagccaagtacccaaccaactgtgccatcaccaccagcaacctgtcagaaagaactagtgcaaggatgttatgcaaagtagttggaagacaatgagtagccaacataggagaaattcagtaaataaggaaagaacaaggacaccctgtcataaattattttataagtagataggatagtaaaggaagcaacaacctttcataagttttaacagatgctaatgcttgactactcaaacgtgcagagaactctaaacttataacaaatgcagtacccctaataaagtccattatgcacgtaccataatcctcaatttttttcgaatggtctccgcacaattgtcaccttgttcggccaatttctccaaacaacccaacccgtagttaatgaaatcagaaggcttcacgacagagagatcaaagacctggaaatagtttcatcagtatgtaatattgtgtcccagaacatacaaaaggataaggaaaaaattctgaaaacatgtgtgaatacataaagtgatcagttgatcatattaaaaaaacagttacgaataatcttcaaagtgtaagtgcaaaatgcttacataggacatcctcaggttccaaacattgatgcataatgaacccagataaaatccagtaattccatgttgagcaaaaaaaaaaaaaaactccgtaaaagataacagtacaatcaaatgactgtattctattggaatagcatgtcaagccaaaaattagaggccgccgaactagtctccatccacttacacctcagaagcaagcatggagctaaaattctgatgtttaaacttttgatcttccctccctgccaacctgccgcttaccatcttcaatatttttcttcatccctccatatcaacaaagttccagggccatgcgagaaagtgaggcacaaatgcacaatctgctggaggctgaagctttcacaacacctatcatgagcatttactacgcatcatccaaccgcaatgttagtatctccatctcctcatcctatccccaagaccccaactacacgtctacaccccctcttcagaacacacgctttttcgttggcacgtccaaactccaataagcaacataaatgctaatagtaccaattgcatgatgaacttcatgattctacttacggagtactacgtgataacaacaggaaatttagaaattcattttggagatggaaaatcaaaatctagtacgatactactagcaatccattttctagaaagtagcaattgaattgaccttatatggcattggtcgagccagaaaatcttcatcagatcacacgcggagctgaggctgttgcccctctttccggtagtagtaccactctagaacgaaagttcatacgtcaccgacagtgtaattccacagaaatacgtctaaatcgctgcgaattttcaaaggaatctcaaaagtaatcaatgactcgcaactcgcgaaaaccataccaagagcaagcaacaagccaacaacccacacaggaacaaccggggagaagcgtgaaaatttggaaacagggttgcacgagtggccgagccaatcggcgatgtcatcacctgctcctcgctgatgagctcgtggagccgcaccttgagctcgggcccgtgcctaccgccgctccgcgagttgacgaacaccaccaccggcgtcacggccgcctccacctccacctccccctcctcgcccctctccgccgccgccgccacgccgacggcctcgtccttggccttcacggcggccgcgaccgcacgccgcgcgtacagcggcatgacgacctgcctccgcagctcggccttgtccacctccttcccccacaccccgcacgcgcgcaccgactcccagatcgacaccctcgccgacggcgccgtcgacggcgccctcggcgtctcctccgctcgctccatcaccggaactactccgtatcactcgcagccgcagctaagcaagagcagcttcgaaatcccctctcctatggcgagctatggcgagctggagtttttttttttggcccgagatgaaattgggggaaaaaacgt
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| CDS seq | atggagcgagcggaggagacgccgagggcgccgtcgacggcgccgtcggcgagggtgtcgatctgggagtcggtgcgcgcgtgcggggtgtgggggaaggaggtggacaaggccgagctgcggaggcaggtcgtcatgccgctgtacgcgcggcgtgcggtcgcggccgccgtgaaggccaaggacgaggccgtcggcgtggcggcggcggcggagaggggcgaggagggggaggtggaggtggaggcggccgtgacgccggtggtggtgttcgtcaactcgcggagcggcggtaggcacgggcccgagctcaaggtgcggctccacgagctcatcagcgaggagcaggtctttgatctctctgtcgtgaagccttctgatttcattaactacgggttgggttgtttggagaaattggccgaacaaggtgacaattgtgcggagaccattcgaaaaaaattgaggattatggttgctggtggtgatggcacagttggttgggtacttggctgtctcacagatctttataggttgaaaagagaaccagttccacccacaggtatcatcccacttggtacaggaaatgatcttgccagatcatttggatggggtggctcttttccctttggttggcgttcagctgtgaagcgttatctcagcaaggcagctacagctcccacctgccgtcttgacaggaccaaatctaatattgtgcaggagaatggctctgagttacctgagaaagcttcttgctataaaggagtattctacaactaccttagcattgggatggatgcccaagttgcttatggcttccaccatcttcgtgatgaaaagccatatcttgctcaagggcctgttgcaaataagttgatatatgctggttatagctgcacacaggggtggttctgcacaccttgtacagcaagccctcagttaagggggcttaagaacattttgcgactttacattaaaaaagtcaattgttctgaatgggagcaagttacaatgccttcaagtgttagatccctggtggtcttaaatttatacaactacggcagtggaaggcatccatggggtgatcttaaacctgattaccttgaaaagaaaggttttgtcgaagctcattccgatgatggattgcttgaaatattcggtctgaaagaaggttggcatgcttcattcgttatggctgagctaattaaagcaaagcacattgctcaggctgcagccatcaagtttgaaatgaggggtggccaatggaatcgtgcgtatgttcagatggatggagagccatggaaacaaccactcctacaggagcagtcaaccattatcgagataaacaaagttccttacccttctctgatgataaatggggagcaatga
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| Protein seq | MERAEETPRAPSTAPSARVSIWESVRACGVWGKEVDKAELRRQVVMPLYARRAVAAAVKAKDEAVGVAAAAERGEEGEVEVEAAVTPVVVFVNSRSGGRHGPELKVRLHELISEEQVFDLSVVKPSDFINYGLGCLEKLAEQGDNCAETIRKKLRIMVAGGDGTVGWVLGCLTDLYRLKREPVPPTGIIPLGTGNDLARSFGWGGSFPFGWRSAVKRYLSKAATAPTCRLDRTKSNIVQENGSELPEKASCYKGVFYNYLSIGMDAQVAYGFHHLRDEKPYLAQGPVANKLIYAGYSCTQGWFCTPCTASPQLRGLKNILRLYIKKVNCSEWEQVTMPSSVRSLVVLNLYNYGSGRHPWGDLKPDYLEKKGFVEAHSDDGLLEIFGLKEGWHASFVMAELIKAKHIAQAAAIKFEMRGGQWNRAYVQMDGEPWKQPLLQEQSTIIEINKVPYPSLMINGEQ |
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| Function | Diacylglycerol kinase 7 [UniProtKB/Swiss-Prot:F4JQ95] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_02g0036220 | OsLiXu_02g0036220.01 | Chr02 | 35272771 | 35280580 | - | NAM | ||
| CDS seq | atggagcgagcggaggagacgccgagggcgccgtcgacggcgccgtcggcgagggtgtcgatctgggagtcggtgcgcgcgtgcggggtgtgggggaaggaggtggacaaggccgagctgcggaggcaggtcgtcatgccgctgtacgcgcggcgtgcggtcgcggccgccgtgaaggccaaggacgaggccgtcggcgtggcggcggcggcggagaggggcgaggagggggaggtggaggtggaggcggccgtgacgccggtggtggtgttcgtcaactcgcggagcggcggtaggcacgggcccgagctcaaggtgcggctccacgagctcatcagcgaggagcaggtctttgatctctctgtcgtgaagccttctgatttcattaactacgggttgggttgtttggagaaattggccgaacaaggtgacaattgtgcggagaccattcgaaaaaaattgaggattatggttgctggtggtgatggcacagttggttgggtacttggctgtctcacagatctttataggttgaaaagagaaccagttccacccacaggtatcatcccacttggtacaggaaatgatcttgccagatcatttggatggggtggctcttttccctttggttggcgttcagctgtgaagcgttatctcagcaaggcagctacagctcccacctgccgtcttgacaggaccaaatctaatattgtgcaggagaatggctctgagttacctgagaaagcttcttgctataaaggagtattctacaactaccttagcattgggatggatgcccaagttgcttatggcttccaccatcttcgtgatgaaaagccatatcttgctcaagggcctgttgcaaataagttgatatatgctggttatagctgcacacaggggtggttctgcacaccttgtacagcaagccctcagttaagggggcttaagaacattttgcgactttacattaaaaaagtcaattgttctgaatgggagcaagttacaatgccttcaagtgttagatccctggtggtcttaaatttatacaactacggcagtggaaggcatccatggggtgatcttaaacctgattaccttgaaaagaaaggttttgtcgaagctcattccgatgatggattgcttgaaatattcggtctgaaagaaggttggcatgcttcattcgttatggctgagctaattaaagcaaagcacattgctcaggctgcagccatcaagtttgaaatgaggggtggccaatggaatcgtgcgtatgttcagatggatggagagccatggaaacaaccactcctacaggagcagtcaaccattatcgagataaacaaagttccttacccttctctgatgataaatggggagcaatga
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| Protein seq | MERAEETPRAPSTAPSARVSIWESVRACGVWGKEVDKAELRRQVVMPLYARRAVAAAVKAKDEAVGVAAAAERGEEGEVEVEAAVTPVVVFVNSRSGGRHGPELKVRLHELISEEQVFDLSVVKPSDFINYGLGCLEKLAEQGDNCAETIRKKLRIMVAGGDGTVGWVLGCLTDLYRLKREPVPPTGIIPLGTGNDLARSFGWGGSFPFGWRSAVKRYLSKAATAPTCRLDRTKSNIVQENGSELPEKASCYKGVFYNYLSIGMDAQVAYGFHHLRDEKPYLAQGPVANKLIYAGYSCTQGWFCTPCTASPQLRGLKNILRLYIKKVNCSEWEQVTMPSSVRSLVVLNLYNYGSGRHPWGDLKPDYLEKKGFVEAHSDDGLLEIFGLKEGWHASFVMAELIKAKHIAQAAAIKFEMRGGQWNRAYVQMDGEPWKQPLLQEQSTIIEINKVPYPSLMINGEQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.684843 | 0.396507 | 1.033300 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0787800 | RBH | 4.035366 | 1.950536 | 3.158995 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g54650 | RBH | 2.698720 | 1.314822 | 0.810140 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0787800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0036400 | RBH | 0.887669 | 13.935099 | 7.091046 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0036500 | RBH | 0.486611 | 1.323088 | 2.686857 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0036340 | RBH | 1.190011 | 10.357777 | 12.970396 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0035940 | RBH | 0.206949 | 0.283151 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0036140 | RBH | 7.909895 | 28.199894 | 20.873449 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0547800 | RBH | 8.4543945 | 32.570264 | 4.5701915 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0035940 | RBH | 0.462111 | 1.377656 | 1.925168 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0578400 | RBH | 10.716407 | 35.8372235 | 9.7766085 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0036200 | RBH | 0.415864 | 0.589773 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0036020 | RBH | 0.642979 | 8.735362 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0036250 | RBH | 4.391925 | 25.367949 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0008910 | RBH | 0.0 | 0.000000 | 1.701929 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0035830 | RBH | 0.400319 | 6.308087 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G036460 | RBH | 0.348357 | 8.131934 | 5.497468 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0036220 | RBH | 3.397832 | 18.817072 | 10.360765 |
