Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_02g0036110 | OGI:02094290 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr02:35198625-35202920 | ||||||||
| Gene Symbol | OsMYB36b, PR1-21, OsPR1#021, OsPR1-21 | ||||||||||
| DNA seq | ctaaactttagtctgttaatgtctagcacactggaagatatgccaagtagtttgatcttagttattagttaaattctagctagcttgtatttggtgatcttcagtagtatgcatgcatagcccttcaattctcctcttatttttgtctctgaatactggagcgcagtactagctaatggttgtctatcctagaccatttcatttctgtctcctgatctgatgcaattgggtgctgtataattcaaatgaatttaaagtatattaattgcatatgattattgtagggctgaagagatgtggcaagagttgcaggctcagatggctcaactacctgcggccaaacattaagcatggtgatttcacagaagaagaggagcacatcatttgtagcctctacattagcatcggtagcaggtaataatcaccatattagcaacttgtcctctcatcgcatgtgcatacataactgcatgcacacacctctctatctacttctactttcctcattctttttcccctttcatctcagagactaacacgtacatgcatcacttactaaaacatggcatgcactattaataacttcagctattaattatcaaaacaaaacaaaacaaaacaaaaactctagctaattactaataatctccctaaaaaatctagataatttagtagagatgtgctaatgctagttgcattcaaaggtggtcgatcatcgcggcgcagctgccggggagaacggacaacgacatcaagaactactggaacaccaagctgaagaagaagctcctcggcaagcgcgcgccgtcgcgccgcgcccgcgcaaaccaagaccactgcggtctagcaggcggcgccgccgccgccatgtgcggtggcgtcggcaccgcggcggcggcggcggcgccgcatcaagccctaagctcgtcggccctcgagcggatccagctccacatgcgtctccaaggcctctacaacagcgcgttcggctgcaccaccaccagcagcaacggcggcggcgtcggcgtcgcgccgccgcagtggccgaagctcgaggcgctgctgccgagcagaccgctcccggccgtgcagccgacggacgccgtcgtcgccaccgtgcaacacccccatcatttggtcgtcggcggccataccctcgccaccgccgccgccgcagccgccaccacgtcggaggcgttccaagccgccgagcacctcgaccctgcggcggcgaccggttcgaactacatgccgggagtcgccggtgtagagatgacctcgtcgtcgtcaatggcgggtggtggtgggttcgtcgccggctacggtctccacgacgagctatacgacttcctcttcaagtgcgagtcgatcggcggagcgcaaggcgggatcatcccttcgtcgttgccggagctgcagtgcccggacggcagcgccatcatcggcgccgacgagaagttctcgacgtggacgtcgtcgtcttgcgactacggttcgggcggcgccggcgattacgttctagggtatgatcaataatagattttggtgttgggtgctagctacatatatatatatattacattcagtgatatggatccaattgttaattgatagctagttggtatatgagataatatgcatatgtacgctcggtttcgattgatcttgaacgtttctgttaatacatatatataaatgtatgtgaattaaattaaactactagtttaattgccatgttttttgtatgagcattagtatcatatcgatgatgttatacatagtatgtgagtgtgaaatgcacagaaataaaatgcatgcatatgtgtgattaattcaatctccgtgtctatgcatgaatacatacatatacttggatagttggatatagccatatgtggtactcctggtctcttggcagctgtgaaaggaacgaaactctagagtttttactatgtgctctcgaaggtccatttgtggtttttagctgacattgccgcttctgggatttcttgtgagtgtagcgtggctctgccccttcccgctattcggagttgcgtttagccaccgtagtagttttttcctagcttcagcttttgttttgctttccttcctttccttggcataagccggtctggctgattgcattgtgtaacaaaatattttttttcttctaatatattaacatgcaatcattttgcgtgttcgtgaaaaaaaaaatatggctatatgcaattatgcatggctctcatcatattcaaaaatatactcctagccctaggagcatgagattgtccaatggtagtcctgttcttgtgtagatgctacatcatctcggtttccagagacggtgccctatgcaactatgctatatatatataatagtagtattgatgtatactgatcgatcatatatgcatgctaatttgctgtgttcaattcaaagtatgtagtcagtagctagacagctatttgttggcgacttggcgtcaatatggcgaacttgcggcgtgcttacagggctgatttgagaacctttgctgtactgacgatagatagaactgttttgttaggcatctctagttaagattcagaacacattatctggcggtctgactgaccgacctgcctgcagtatacctacctgtaggtcagtaggtggaaacggtatatacgtcgcacgcgtgcgtacttcatctcgaaataaaacctgtgacaaaatcgcacgctggctgatcgagttgcttgaaacttgtaaacgtaggctgtgtttagatggtgaaaagttaggaagttgggaaaaagttgatagtttggagaaaaaattgatagtttttttgtgtgtatgaaagttttcgatgtgatgtgatgtgatggaaagttaggaatttgggggaactaaacacggccgtaggtggaatttgctccgtccgccctttctcggtcgttcgatcgggcgattggctcagtacaagaggggaaggagaaagggtgatgatgtggtcaccctaatatgtgaggttcatgtgggtctcatactgagccgtcacgtcgaacaaaaccgcggttaaaatcacctaaggatgcaaagtgatctggttttgtaaattgagagatatcatatatttttggtttttggttgagacatagacaattttataattcggtgataagatgagggatctcatatgtactttttcctattatatactccagtatgcaggccgtagctgcaacgtgaggtactatatgggccgtaacgggattgagacggacgttcagcccatactagatggaccgaaactgtgaaaacgggaagcgcttggcccttcttgctaaatgtccgaaacggtatttgcggcccagttccagatgtcctatgtgcaacgcaatatgagggcagtggcaatacgtaacgtgctcgacgtgcccgtatattgtgcccaaaatgtcgcaatccatcgtgcgacaaaatctagctggctttgatatgttagacatggacgcaaatcaaattatgcatatatagcttgcttggactttatcttgcttagttatatatgcatgccaaccataatcttttttttttgaaacaaatgccaaccattatcgaacatgaacgccactccttcagccctggcacgcactttcccagccaaaaactctcgtactccagctcgtataaatacgaacgtaacacaaacatcacacctgatctgatcgatcaagcgaaaaaaaatcgtacttaattaggagcaagcaatggcttctcgccgcctcccgttcgcggcggtcaccgccgtgctcctcctcctccacggcgccgctgacgccaagtcgtcgtcgtcgtcggggaagacgaagagcctcgcgtcggggttcctggacgcgcacaacgcggcgcggcgccaggtcggggtgccgccgctgcggtgggacgagaggctggcgtcgtacgcggcgcggtacgcggcggcgcggagcggcgccggcggcggctgcgcgctgttgcactcgcacgggccgtacggggagaacctgttccacggcagcggcgtcgggtgggcgcccgcggacgtggtggcggcgtgggtgtcgcgggagcgcgcgctgtacgacgcggcgtccaactcgtgccgcggcgccgacgccgcggcgtgcgggcactacacgcaggtggtgtggcggcgcaccacggcggtgggctgcgcgctcgccacctgcgccggtggccgcggcacgtacggcgtctgcagctacaacccgccgggcaactacgtcggcgtgaggccgtactag
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| CDS seq | atgattattgtagggctgaagagatgtggcaagagttgcaggctcagatggctcaactacctgcggccaaacattaagcatggtgatttcacagaagaagaggagcacatcatttgtagcctctacattagcatcggtagcaggtggtcgatcatcgcggcgcagctgccggggagaacggacaacgacatcaagaactactggaacaccaagctgaagaagaagctcctcggcaagcgcgcgccgtcgcgccgcgcccgcgcaaaccaagaccactgcggtctagcaggcggcgccgccgccgccatgtgcggtggcgtcggcaccgcggcggcggcggcggcgccgcatcaagccctaagctcgtcggccctcgagcggatccagctccacatgcgtctccaaggcctctacaacagcgcgttcggctgcaccaccaccagcagcaacggcggcggcgtcggcgtcgcgccgccgcagtggccgaagctcgaggcgctgctgccgagcagaccgctcccggccgtgcagccgacggacgccgtcgtcgccaccgtgcaacacccccatcatttggtcgtcggcggccataccctcgccaccgccgccgccgcagccgccaccacgtcggaggcgttccaagccgccgagcacctcgaccctgcggcggcgaccggttcgaactacatgccgggagtcgccggtgtagagatgacctcgtcgtcgtcaatggcgggtggtggtgggttcgtcgccggctacggtctccacgacgagctatacgacttcctcttcaagtgcgagtcgatcggcggagcgcaaggcgggatcatcccttcgtcgttgccggagctgcagtgcccggacggcagcgccatcatcggcgccgacgagaagttctcgacgtggacgtcgtcgtcttgcgactacggttcgggcggcgccggcgattacgagcaagcaatggcttctcgccgcctcccgttcgcggcggtcaccgccgtgctcctcctcctccacggcgccgctgacgccaagtcgtcgtcgtcgtcggggaagacgaagagcctcgcgtcggggttcctggacgcgcacaacgcggcgcggcgccaggtcggggtgccgccgctgcggtgggacgagaggctggcgtcgtacgcggcgcggtacgcggcggcgcggagcggcgccggcggcggctgcgcgctgttgcactcgcacgggccgtacggggagaacctgttccacggcagcggcgtcgggtgggcgcccgcggacgtggtggcggcgtgggtgtcgcgggagcgcgcgctgtacgacgcggcgtccaactcgtgccgcggcgccgacgccgcggcgtgcgggcactacacgcaggtggtgtggcggcgcaccacggcggtgggctgcgcgctcgccacctgcgccggtggccgcggcacgtacggcgtctgcagctacaacccgccgggcaactacgtcggcgtgaggccgtactag
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| Protein seq | MIIVGLKRCGKSCRLRWLNYLRPNIKHGDFTEEEEHIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGKRAPSRRARANQDHCGLAGGAAAAMCGGVGTAAAAAAPHQALSSSALERIQLHMRLQGLYNSAFGCTTTSSNGGGVGVAPPQWPKLEALLPSRPLPAVQPTDAVVATVQHPHHLVVGGHTLATAAAAAATTSEAFQAAEHLDPAAATGSNYMPGVAGVEMTSSSSMAGGGGFVAGYGLHDELYDFLFKCESIGGAQGGIIPSSLPELQCPDGSAIIGADEKFSTWTSSSCDYGSGGAGDYEQAMASRRLPFAAVTAVLLLLHGAADAKSSSSSGKTKSLASGFLDAHNAARRQVGVPPLRWDERLASYAARYAAARSGAGGGCALLHSHGPYGENLFHGSGVGWAPADVVAAWVSRERALYDAASNSCRGADAAACGHYTQVVWRRTTAVGCALATCAGGRGTYGVCSYNPPGNYVGVRPY |
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| Function | Transcription factor MYB36 [UniProtKB/Swiss-Prot:Q9FKL2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_02g0036110 | OsLiXu_02g0036110.01 | Chr02 | 35198625 | 35202920 | + | NAM | ||
| CDS seq | atgattattgtagggctgaagagatgtggcaagagttgcaggctcagatggctcaactacctgcggccaaacattaagcatggtgatttcacagaagaagaggagcacatcatttgtagcctctacattagcatcggtagcaggtggtcgatcatcgcggcgcagctgccggggagaacggacaacgacatcaagaactactggaacaccaagctgaagaagaagctcctcggcaagcgcgcgccgtcgcgccgcgcccgcgcaaaccaagaccactgcggtctagcaggcggcgccgccgccgccatgtgcggtggcgtcggcaccgcggcggcggcggcggcgccgcatcaagccctaagctcgtcggccctcgagcggatccagctccacatgcgtctccaaggcctctacaacagcgcgttcggctgcaccaccaccagcagcaacggcggcggcgtcggcgtcgcgccgccgcagtggccgaagctcgaggcgctgctgccgagcagaccgctcccggccgtgcagccgacggacgccgtcgtcgccaccgtgcaacacccccatcatttggtcgtcggcggccataccctcgccaccgccgccgccgcagccgccaccacgtcggaggcgttccaagccgccgagcacctcgaccctgcggcggcgaccggttcgaactacatgccgggagtcgccggtgtagagatgacctcgtcgtcgtcaatggcgggtggtggtgggttcgtcgccggctacggtctccacgacgagctatacgacttcctcttcaagtgcgagtcgatcggcggagcgcaaggcgggatcatcccttcgtcgttgccggagctgcagtgcccggacggcagcgccatcatcggcgccgacgagaagttctcgacgtggacgtcgtcgtcttgcgactacggttcgggcggcgccggcgattacgagcaagcaatggcttctcgccgcctcccgttcgcggcggtcaccgccgtgctcctcctcctccacggcgccgctgacgccaagtcgtcgtcgtcgtcggggaagacgaagagcctcgcgtcggggttcctggacgcgcacaacgcggcgcggcgccaggtcggggtgccgccgctgcggtgggacgagaggctggcgtcgtacgcggcgcggtacgcggcggcgcggagcggcgccggcggcggctgcgcgctgttgcactcgcacgggccgtacggggagaacctgttccacggcagcggcgtcgggtgggcgcccgcggacgtggtggcggcgtgggtgtcgcgggagcgcgcgctgtacgacgcggcgtccaactcgtgccgcggcgccgacgccgcggcgtgcgggcactacacgcaggtggtgtggcggcgcaccacggcggtgggctgcgcgctcgccacctgcgccggtggccgcggcacgtacggcgtctgcagctacaacccgccgggcaactacgtcggcgtgaggccgtactag
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| Protein seq | MIIVGLKRCGKSCRLRWLNYLRPNIKHGDFTEEEEHIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGKRAPSRRARANQDHCGLAGGAAAAMCGGVGTAAAAAAPHQALSSSALERIQLHMRLQGLYNSAFGCTTTSSNGGGVGVAPPQWPKLEALLPSRPLPAVQPTDAVVATVQHPHHLVVGGHTLATAAAAAATTSEAFQAAEHLDPAAATGSNYMPGVAGVEMTSSSSMAGGGGFVAGYGLHDELYDFLFKCESIGGAQGGIIPSSLPELQCPDGSAIIGADEKFSTWTSSSCDYGSGGAGDYEQAMASRRLPFAAVTAVLLLLHGAADAKSSSSSGKTKSLASGFLDAHNAARRQVGVPPLRWDERLASYAARYAAARSGAGGGCALLHSHGPYGENLFHGSGVGWAPADVVAAWVSRERALYDAASNSCRGADAAACGHYTQVVWRRTTAVGCALATCAGGRGTYGVCSYNPPGNYVGVRPY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.259330 | 0.128697 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0786400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g54530 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0786400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0036290 | RBH | 0.0 | 35.544170 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0036390 | RBH | 0.000000 | 0.536749 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0036230 | RBH | 0.0 | 10.896524 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0035820 | RBH | 0.0 | 0.241193 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0036010 | RBH | 0.0 | 4.082817 | 0.638485 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0546400 | RBH | 0.230945 | 0.058392 | 0.3131165 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0035830 | RBH | 0.0 | 1.051687 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0577100 | RBH | 0.206938 | 0.00607 | 0.7610945 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0036090 | RBH | 0.0 | 0.245653 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0035910 | RBH | 0.0 | 5.299391 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0036150 | RBH | 0.0 | 12.881377 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0036140 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0035720 | RBH | 0.0 | 14.767255 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G036360 | RBH | 0.0 | 8.546945 | 1.054079 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0036100 | RBH | 0.0 | 5.983401 | 0.0 |
