Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_02g0031701 | OGI:02018650 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr02:31876022-31876476 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | cgccgggaaggccgaaggaggccatccaaatgtattaagaaggagtaaaagttacaagaaaaaaaaacatcacaatgcaccaaggtgcatgacctcacagcacgcactaccacccaagcacaaaccgctgagggtgaagcctagcaccaaacgacccccgctaagaatggccgaacgccgctaggcctacggcaacaccacagagacaagactccgaaaacgaagccaccacggtggtcacgacatccaggatgccgccatcgcccatctaaaaaagatgtggttttcacccagagaagcttatcgagaaaggaagagggtaaccctcgacaacgccccaaggaggttacgacgcccgaagacatagccgctgccggcccagtgaatcaccggactaggctttcgcctgggaccctacaaccttgactgtagatcgccgtccaccaactcagaac
More
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| CDS seq | gttctgagttggtggacggcgatctacagtcaaggttgtagggtcccaggcgaaagcctagtc |
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| Protein seq | VLSWWTAIYSQGCRVPGESLV |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_02g0031701 | OsLiXu_02g0031701.01 | Chr02 | 31876022 | 31876476 | - | IsoSeq | ||
| CDS seq | gttctgagttggtggacggcgatctacagtcaaggttgtagggtcccaggcgaaagcctagtc |
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| Protein seq | VLSWWTAIYSQGCRVPGESLV |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.204601 | 0.0 | 1.408967 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0618266 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0618266 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0009640 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0009570 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0031631 | RBH | 6.641074 | 16.443312 | 11.304008 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0417900 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0023890 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0428400 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0023150 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0031481 | RBH | 1.396637 | 4.626400 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0023190 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0023400 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0002990 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G018250 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0009390 | SBH | 0.0 | 0.0 | 0.0 |
